Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 2.6e-171 605.5 352 100.0
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 9.8e-147 523.9 350 90.0
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 4.3e-142 508.4 356 84.6
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 5.1e-127 458.4 354 78.8
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 1.6e-125 453.4 359 80.2
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 8.1e-125 451.1 354 78.8
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 1.2e-112 410.6 364 74.2
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 5.6e-110 401.7 361 76.2
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 2.1e-104 383.3 357 72.5
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 4.3e-102 375.6 357 67.8
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 4.3e-102 375.6 363 72.7
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 1.3e-98 364.0 360 71.1
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 6.0e-88 328.6 295 62.7
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 5.3e-84 315.5 324 70.1
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 1.5e-75 287.3 296 57.4
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 9.4e-73 278.1 291 55.7
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 1.8e-71 273.9 284 56.0
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 8.8e-71 271.6 290 54.5
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 3.3e-70 269.6 296 51.0
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 2.8e-69 266.5 296 52.7
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 3.7e-69 266.2 296 53.7
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 8.2e-69 265.0 295 51.9
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 4.1e-68 262.7 292 53.4
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 6.9e-68 261.9 301 52.5
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 1.2e-67 261.2 286 54.2
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 8.5e-66 255.0 292 55.5
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.1e-65 254.6 317 50.8
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.9e-65 253.8 287 52.6
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 3.2e-65 253.1 275 54.2
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 3.2e-65 253.1 287 52.6
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 7.2e-65 251.9 280 53.9
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 1.6e-64 250.8 289 48.8
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 3.6e-64 249.6 295 48.5
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 6.1e-64 248.8 290 52.1
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.0e-63 248.1 315 49.8
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 2.3e-63 246.9 289 51.6
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 5.1e-63 245.7 294 51.0
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 1.1e-62 244.6 295 51.2
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 2.0e-62 243.8 292 52.1
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 2.0e-62 243.8 294 49.3
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 2.6e-62 243.4 297 50.8
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 3.3e-62 243.0 355 51.0
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 5.7e-62 242.3 295 50.2
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 9.7e-62 241.5 292 50.7
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 1.7e-61 240.7 293 50.5
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 2.8e-61 240.0 354 51.4
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 2.8e-61 240.0 299 48.8
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 1.4e-60 237.7 352 48.0
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 3.1e-60 236.5 304 48.0
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 5.3e-60 235.7 295 48.1
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 1.6e-59 234.2 288 47.2
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 2.0e-59 233.8 291 48.1
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 3.5e-59 233.0 301 46.5
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 5.9e-59 232.3 306 47.7
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 7.7e-59 231.9 294 47.3
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 7.7e-59 231.9 300 47.3
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 1.7e-58 230.7 291 46.4
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 2.2e-58 230.3 279 50.2
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 5.0e-58 229.2 308 44.8
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 5.0e-58 229.2 279 48.7
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 8.5e-58 228.4 292 46.9
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 8.5e-58 228.4 262 49.2
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 1.1e-57 228.0 271 52.4
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 2.5e-57 226.9 297 48.8
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 5.5e-57 225.7 290 47.2
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 5.5e-57 225.7 295 48.5
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 7.2e-57 225.3 279 47.7
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 2.7e-56 223.4 274 49.6
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 3.6e-56 223.0 284 48.2
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 8.0e-56 221.9 285 46.0
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 1.0e-55 221.5 265 51.3
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 1.4e-55 221.1 290 45.9
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 5.2e-55 219.2 312 45.2
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 3.3e-54 216.5 284 46.8
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 4.4e-54 216.1 252 52.0
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 5.7e-54 215.7 276 46.4
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 7.5e-54 215.3 292 45.2
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 7.5e-54 215.3 289 44.6
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 1.3e-53 214.5 267 50.6
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 4.8e-53 212.6 299 46.2
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 8.2e-53 211.8 222 54.1
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 1.1e-52 211.5 277 46.2
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 3.1e-52 209.9 279 47.3
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 1.7e-50 204.1 297 42.4
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 2.9e-50 203.4 354 45.8
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 8.5e-50 201.8 301 42.5
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 8.5e-50 201.8 272 44.5
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 1.1e-49 201.4 276 43.5
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 1.9e-49 200.7 254 48.0
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 3.2e-49 199.9 217 53.0
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 3.2e-49 199.9 306 42.8
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 3.2e-49 199.9 291 41.2
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 1.2e-48 198.0 328 40.2
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 2.7e-48 196.8 503 31.4
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 4.7e-48 196.1 294 43.9
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 6.1e-48 195.7 277 45.5
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 4.4e-46 189.5 263 46.4
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 1.1e-44 184.9 345 37.7
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 1.2e-43 181.4 332 38.6
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 1.3e-42 177.9 280 38.9
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 3.8e-42 176.4 248 44.4
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 1.1e-41 174.9 300 42.7
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 2.7e-40 170.2 289 41.2
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 5.2e-39 166.0 176 52.8
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 4.9e-37 159.5 224 41.1
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 4.9e-37 159.5 166 53.6
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 5.9e-35 152.5 259 40.5
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 4.3e-33 146.4 206 44.7
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 4.0e-31 139.8 206 44.2
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 1.1e-28 131.7 251 34.7
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 4.1e-28 129.8 271 36.2
C04p59170 Brassica napus HOM05D006271 ORTHO05D023853 7.8e-27 125.6 209 45.5
BolC4t27428H Brassica oleracea HOM05D006271 ORTHO05D023853 1.3e-26 124.8 209 46.4
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 5.0e-26 122.9 274 33.9
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 6.6e-26 122.5 184 42.9
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 3.3e-25 120.2 187 40.6
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 2.1e-24 117.5 296 33.4
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 2.8e-24 117.1 107 66.4
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 7.8e-19 99.0 274 30.7
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 8.1e-16 89.0 93 52.7
Sp6g37300 Schrenkiella parvula HOM05D006271 ORTHO05D008237 1.8e-15 87.8 224 36.2
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 7.5e-14 82.4 98 50.0
A04p23050 Brassica napus HOM05D006271 ORTHO05D023853 8.3e-13 79.0 208 37.5
PSO017G3993 Papaver somniferum HOM05D006271 ORTHO05D008237 3.0e-10 70.5 210 30.0
PSO170G2099 Papaver somniferum HOM05D006271 ORTHO05D008237 6.6e-10 69.3 210 29.5
BcaB05g24172 Brassica carinata HOM05D000064 ORTHO05D094673 8.6e-10 68.9 47 78.7


User provided reference genes

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