Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 0.0e+00 1215.7 614 100.0
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 0.0e+00 1153.3 618 94.2
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 0.0e+00 1118.2 621 91.0
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 0.0e+00 1095.1 625 87.8
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 4.2e-310 1067.4 621 86.3
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 2.6e-304 1048.1 617 85.1
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 7.6e-304 1046.6 617 85.3
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 3.0e-300 1034.6 619 84.0
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 3.0e-300 1034.6 619 84.0
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 3.0e-300 1034.6 616 81.8
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 2.8e-298 1028.1 626 83.1
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 1.8e-297 1025.4 556 93.3
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 9.1e-257 890.2 628 69.4
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 4.5e-256 887.9 634 69.6
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 5.5e-254 880.9 632 69.1
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 8.0e-253 877.1 631 68.5
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 6.7e-252 874.0 632 68.2
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 6.7e-252 874.0 630 67.9
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 1.1e-251 873.2 632 68.0
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 2.6e-251 872.1 632 68.0
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 2.6e-251 872.1 631 68.3
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 9.7e-251 870.2 626 66.9
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 1.7e-250 869.4 623 68.2
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 1.7e-250 869.4 632 67.9
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 2.2e-250 869.0 639 67.3
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 3.1e-249 865.1 630 67.5
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 4.5e-248 861.3 635 68.0
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 5.9e-248 860.9 627 67.0
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 1.0e-247 860.1 677 64.0
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 3.8e-247 858.2 629 67.1
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 5.0e-247 857.8 629 67.1
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 1.1e-246 856.7 632 66.9
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 1.5e-246 856.3 625 65.4
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 1.8e-244 849.4 625 66.2
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 1.2e-243 846.7 633 66.4
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 2.0e-243 845.9 632 67.4
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 1.3e-242 843.2 637 64.8
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 1.3e-242 843.2 630 65.7
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 2.8e-242 842.0 622 65.4
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 1.1e-241 840.1 635 65.5
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 1.8e-241 839.3 623 65.3
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 1.8e-241 839.3 653 65.1
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 3.1e-241 838.6 623 66.3
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 5.3e-241 837.8 633 65.9
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 7.0e-241 837.4 627 65.1
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 3.5e-240 835.1 625 65.1
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 7.7e-240 833.9 633 65.7
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 1.0e-239 833.6 622 65.9
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 2.9e-239 832.0 633 65.4
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 2.9e-239 832.0 631 65.6
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 3.8e-239 831.6 630 65.2
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 8.5e-239 830.5 650 64.0
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 1.1e-238 830.1 624 66.0
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 4.2e-238 828.2 627 64.9
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 9.4e-238 827.0 633 64.9
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 2.7e-237 825.5 615 66.5
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 4.7e-237 824.7 637 64.4
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 4.7e-237 824.7 611 67.1
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 1.4e-236 823.2 629 63.9
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 2.3e-236 822.4 633 64.8
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 5.2e-236 821.2 626 63.6
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 6.8e-236 820.8 610 66.6
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 5.7e-235 817.8 626 62.8
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 1.7e-234 816.2 626 62.5
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 1.0e-231 807.0 617 63.4
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 3.8e-231 805.1 580 67.9
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 3.8e-231 805.1 632 63.0
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 8.6e-231 803.9 613 64.1
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 1.5e-230 803.1 635 62.2
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 3.3e-230 802.0 632 63.3
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 1.2e-229 800.0 602 65.6
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 2.1e-229 799.3 628 64.0
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 3.6e-229 798.5 605 64.3
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 1.4e-228 796.6 636 62.3
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 2.6e-227 792.3 630 60.6
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 4.4e-227 791.6 633 63.8
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 6.3e-226 787.7 666 60.4
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 5.9e-224 781.2 596 64.8
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 5.9e-224 781.2 630 60.0
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 1.2e-221 773.5 634 61.0
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 4.7e-221 771.5 626 61.5
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 4.0e-220 768.5 589 64.3
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 1.4e-217 760.0 575 65.2
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 5.4e-217 758.1 620 60.5
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 8.6e-215 750.7 596 62.4
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 8.6e-215 750.7 633 61.6
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 2.1e-213 746.1 631 59.4
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 1.2e-203 713.8 630 55.7
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 1.4e-193 680.2 578 58.3
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 5.6e-190 668.3 631 54.0
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 8.7e-183 644.4 450 71.1
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 1.3e-175 620.5 447 67.3
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 9.0e-172 607.8 624 51.1
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 3.8e-170 602.4 492 61.2
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 7.1e-169 598.2 446 65.7
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 6.1e-160 568.5 416 65.1
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 5.1e-159 565.5 643 47.4
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 1.6e-152 543.9 405 66.7
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 3.6e-144 516.2 601 45.6
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 1.7e-138 497.3 623 44.8
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.7e-138 497.3 399 61.4
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 2.5e-137 493.4 417 60.7
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 8.9e-111 405.2 417 54.9
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 1.4e-108 397.9 611 39.9
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 1.0e-103 381.7 762 32.8
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 1.0e-90 338.6 273 63.7
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 8.1e-72 275.8 175 78.3
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 8.2e-40 169.5 174 50.0
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 6.5e-37 159.8 211 40.8
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 7.9e-35 152.9 146 52.7
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 3.7e-32 144.1 163 49.1
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 1.6e-27 128.6 77 77.9
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 1.2e-22 112.5 84 69.0
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 5.3e-15 87.0 84 56.0
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 4.7e-11 73.9 87 43.7
MD13G1179000 Malus domestica HOM05D002762 ORTHO05D030920 3.7e-08 64.3 36 77.8
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 6.3e-08 63.5 40 75.0
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 2.0e-06 58.5 49 61.2
SMO165G0130 Selaginella moellendorffii HOM05D000740 ORTHO05D007141 4.5e-06 57.4 217 26.7


User provided reference genes

Program Settings