Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G48940 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 9.0e-151 537.0 284 100.0
Carub.0003s3364 Capsella rubella HOM05D006355 ORTHO05D008284 1.1e-132 476.9 284 85.2
AT2G19385 Arabidopsis thaliana HOM05D006355 ORTHO05D008284 4.1e-127 458.4 284 84.5
CARHR109830 Cardamine hirsuta HOM05D006355 ORTHO05D008284 2.3e-122 442.6 286 81.5
Thhalv10022802m.g Eutrema salsugineum HOM05D006355 ORTHO05D008284 4.8e-120 434.9 284 79.6
Sp3g32760 Schrenkiella parvula HOM05D006355 ORTHO05D008284 4.8e-120 434.9 285 80.4
BcaB03g16724 Brassica carinata HOM05D006355 ORTHO05D008284 2.6e-105 386.0 284 70.8
BraA07t27933Z Brassica rapa HOM05D006355 ORTHO05D008284 1.6e-102 376.7 284 71.1
Aa31LG8G16390 Aethionema arabicum HOM05D006355 ORTHO05D008284 5.9e-102 374.8 287 70.7
A07p01380 Brassica napus HOM05D006355 ORTHO05D008284 5.0e-101 371.7 287 70.0
C07p02840 Brassica napus HOM05D006355 ORTHO05D008284 1.5e-100 370.2 286 69.9
BolC7t40681H Brassica oleracea HOM05D006355 ORTHO05D008284 1.5e-100 370.2 286 69.9
BcaC06g36568 Brassica carinata HOM05D006355 ORTHO05D008284 1.2e-99 367.1 287 69.7
Cpa.g.sc28.115 Carica papaya HOM05D006355 ORTHO05D008284 1.0e-77 294.3 327 52.0
GSVIVG01015151001 Vitis vinifera HOM05D006355 ORTHO05D008284 1.9e-76 290.0 287 55.1
Manes.16G098900 Manihot esculenta HOM05D006355 ORTHO05D008284 1.6e-75 287.0 325 52.3
HanXRQChr12g0354551 Helianthus annuus HOM05D006355 ORTHO05D008284 1.1e-74 284.3 288 53.5
ECA234G3558 Erigeron canadensis HOM05D006355 ORTHO05D008284 5.2e-74 282.0 297 53.5
Thecc.09G082800 Theobroma cacao HOM05D006355 ORTHO05D008284 6.8e-74 281.6 330 49.4
Glyma.13G107200 Glycine max HOM05D006355 ORTHO05D008284 1.2e-73 280.8 308 52.3
Prupe.7G204300 Prunus persica HOM05D006355 ORTHO05D008284 2.6e-73 279.6 304 54.3
TAR413G0001 Trochodendron aralioides HOM05D006355 ORTHO05D008284 7.6e-73 278.1 329 49.8
Rhsim05G0014000 Rhododendron simsii HOM05D006355 ORTHO05D008284 1.7e-72 276.9 331 51.1
Ca_21303_v3 Cicer arietinum L. HOM05D006355 ORTHO05D008284 3.7e-72 275.8 314 51.0
Oeu010827.1 Olea europaea HOM05D006355 ORTHO05D008284 3.7e-72 275.8 309 51.1
RcHm_v2.0_Chr2g0094111 Rosa chinensis HOM05D006355 ORTHO05D008284 4.9e-72 275.4 309 52.8
Atru.chr7.1648 Acer truncatum HOM05D006355 ORTHO05D008284 6.4e-72 275.0 327 49.2
Nitab4.5_0002079g0060 Nicotiana tabacum HOM05D006355 ORTHO05D008284 6.4e-72 275.0 311 50.2
Aqoxy7G01135 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 2.4e-71 273.1 316 50.9
Sed0027351 Sechium edule HOM05D006355 ORTHO05D008284 3.2e-71 272.7 312 52.9
Gohir.D07G013200 Gossypium hirsutum HOM05D006355 ORTHO05D008284 4.1e-71 272.3 323 48.3
PGR142G1993 Punica granatum HOM05D006355 ORTHO05D008284 5.4e-71 271.9 300 54.3
Lj4A288G20 Lonicera japonica HOM05D006355 ORTHO05D008284 7.1e-71 271.6 326 49.4
Hma1.2p1_0672F.1_g200900 Hydrangea macrophylla HOM05D006355 ORTHO05D008284 1.2e-70 270.8 321 49.8
MELO3C004639.2 Cucumis melo HOM05D006355 ORTHO05D008284 1.6e-70 270.4 316 49.7
Gorai.001G013900 Gossypium raimondii HOM05D006355 ORTHO05D008284 1.6e-70 270.4 323 48.0
Peaxi162Scf00494g00027 Petunia axillaris HOM05D006355 ORTHO05D008284 2.7e-70 269.6 318 49.1
CiPaw.03G211000 Carya illinoinensis HOM05D006355 ORTHO05D008284 3.5e-70 269.2 324 49.4
Gohir.A07G013400 Gossypium hirsutum HOM05D006355 ORTHO05D008284 3.5e-70 269.2 322 47.8
Eucgr.C00847 Eucalyptus grandis HOM05D006355 ORTHO05D008284 7.8e-70 268.1 328 49.4
arahy.Tifrunner.gnm1.ann1.I94R61 Arachis hypogaea HOM05D006355 ORTHO05D008284 1.0e-69 267.7 307 52.4
CANSAT56G1278 Cannabis sativa HOM05D006355 ORTHO05D008284 1.3e-69 267.3 313 48.6
CANSAT56G3969 Cannabis sativa HOM05D006355 ORTHO05D008284 1.3e-69 267.3 313 48.6
Glyma.17G052200 Glycine max HOM05D006355 ORTHO05D008284 1.3e-69 267.3 311 51.1
Phvul.003G133900 Phaseolus vulgaris HOM05D006355 ORTHO05D008284 1.3e-69 267.3 316 49.7
ClCG11G001610 Citrullus lanatus HOM05D006355 ORTHO05D008284 1.7e-69 266.9 316 49.7
FvH4_1g08060 Fragaria vesca HOM05D006355 ORTHO05D008284 1.7e-69 266.9 309 52.8
FAN19G0491 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.7e-69 266.9 309 52.8
Cfa003044 Carpinus fangiana HOM05D006355 ORTHO05D008284 2.3e-69 266.5 314 50.6
QL02p061794 Quercus lobata HOM05D006355 ORTHO05D008284 2.3e-69 266.5 323 48.6
Haze_25952 Corylus avellana HOM05D006355 ORTHO05D008284 3.9e-69 265.8 320 50.9
CsaV3_2G001300 Cucumis sativus L. HOM05D006355 ORTHO05D008284 6.6e-69 265.0 315 49.8
QL02p061767 Quercus lobata HOM05D006355 ORTHO05D008284 8.6e-69 264.6 323 48.3
TWI34G0237 Tripterygium wilfordii HOM05D006355 ORTHO05D008284 1.1e-68 264.2 307 48.9
FAN28G1606 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.5e-68 263.8 310 51.9
Lj4g0004716 Lotus japonicus HOM05D006355 ORTHO05D008284 1.5e-68 263.8 315 49.8
AUR62029015 Chenopodium quinoa HOM05D006355 ORTHO05D008284 5.6e-68 261.9 327 52.6
FAN23G1962 Fragaria x ananassa HOM05D006355 ORTHO05D008284 7.3e-68 261.5 308 51.9
Nitab4.5_0002842g0040 Nicotiana tabacum HOM05D006355 ORTHO05D008284 7.3e-68 261.5 328 47.0
TPR.G9437 Trifolium pratense HOM05D006355 ORTHO05D008284 7.3e-68 261.5 308 50.3
Duzib168G2189 Durio zibethinus HOM05D006355 ORTHO05D008284 9.6e-68 261.2 321 51.1
Psat4g016280 Pisum sativum HOM05D006355 ORTHO05D008284 9.6e-68 261.2 298 49.3
Migut.L01533 Erythranthe guttata HOM05D006355 ORTHO05D008284 8.1e-67 258.1 312 46.8
FAN26G2768 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.4e-66 257.3 321 50.5
Lalb_Chr12g0199961 Lupinus albus HOM05D006355 ORTHO05D008284 1.4e-66 257.3 305 50.2
CAN.G35.5 Capsicum annuum HOM05D006355 ORTHO05D008284 2.4e-66 256.5 315 45.1
Lsat_1_v5_gn_5_143521 Lactuca sativa HOM05D006355 ORTHO05D008284 2.4e-66 256.5 283 50.9
FAN26G1509 Fragaria x ananassa HOM05D006355 ORTHO05D008284 3.1e-66 256.1 321 50.5
Ciclev10008972m.g Citrus clementina HOM05D006355 ORTHO05D008284 5.2e-66 255.4 312 47.8
Medtr4g125720 Medicago truncatula HOM05D006355 ORTHO05D008284 5.2e-66 255.4 297 49.8
Solyc07g041020.3 Solanum lycopersicum HOM05D006355 ORTHO05D008284 2.0e-65 253.4 311 47.6
vmacro17166 Vaccinium macrocarpon HOM05D006355 ORTHO05D008284 2.6e-65 253.1 300 49.3
PGSC0003DMG400014101 Solanum tuberosum HOM05D006355 ORTHO05D008284 3.4e-65 252.7 310 48.7
DCAR_024718 Daucus carota HOM05D006355 ORTHO05D008284 4.4e-65 252.3 317 47.6
SalBow1G0189 Salvia bowleyana HOM05D006355 ORTHO05D008284 4.4e-65 252.3 322 47.2
Cc06_g11800 Coffea canephora HOM05D006355 ORTHO05D008284 5.8e-65 251.9 330 45.8
Potri.006G146200 Populus trichocarpa HOM05D006355 ORTHO05D008284 9.9e-65 251.1 324 47.5
Sopen07g020150 Solanum pennellii HOM05D006355 ORTHO05D008284 9.9e-65 251.1 308 47.4
Hund08706 Selenicereus undatus HOM05D006355 ORTHO05D008284 1.3e-64 250.8 330 47.6
Nn8g38760 Nelumbo nucifera HOM05D006355 ORTHO05D008284 3.2e-63 246.1 324 46.9
Nn8g41302 Nelumbo nucifera HOM05D006355 ORTHO05D008284 3.2e-63 246.1 324 46.9
AUR62025162 Chenopodium quinoa HOM05D006355 ORTHO05D008284 1.6e-62 243.8 316 47.2
SGA_v2.0_scaffold21G09447 Striga asiatica HOM05D006355 ORTHO05D008284 2.7e-62 243.0 305 46.6
Zm00001eb357030 Zea mays HOM05D006355 ORTHO05D008284 1.1e-60 237.7 299 48.2
Os01g0583200 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D008284 1.6e-59 233.8 306 44.4
CDE06G0893 Ceratophyllum demersum HOM05D006355 ORTHO05D008284 3.6e-59 232.6 316 44.3
Carub.0003s3362 Capsella rubella HOM05D006355 ORTHO05D008284 1.2e-57 227.6 343 44.9
ATR0051G027 Amborella trichopoda HOM05D006355 ORTHO05D008284 7.6e-57 224.9 318 44.0
Sabra06G0115400 Salix brachista HOM05D006355 ORTHO05D008284 1.3e-56 224.2 365 41.6
MBI11_g07532_MAGBIO Magnolia biondii HOM05D006355 ORTHO05D008284 3.8e-56 222.6 327 43.1
Sc08g0008680 Simmondsia chinensis HOM05D006355 ORTHO05D008284 8.4e-56 221.5 326 45.7
Dinv36798 Davidia involucrata HOM05D006355 ORTHO05D008284 4.2e-55 219.2 182 59.9
Gohir.A05G032100 Gossypium hirsutum HOM05D006355 ORTHO05D008284 1.6e-54 217.2 307 45.3
COL.COLO4_18155 Corchorus olitorius HOM05D006355 ORTHO05D008284 4.6e-54 215.7 330 43.3
MD15G1212400 Malus domestica HOM05D006355 ORTHO05D008284 5.1e-53 212.2 313 45.7
Actinidia25231 Actinidia chinensis HOM05D006355 ORTHO05D008284 1.9e-52 210.3 152 62.5
MD02G1085300 Malus domestica HOM05D006355 ORTHO05D008284 4.3e-52 209.1 311 45.7
arahy.Tifrunner.gnm1.ann1.2VE13Z Arachis hypogaea HOM05D006355 ORTHO05D008284 5.6e-52 208.8 307 46.3
PSO063G0296 Papaver somniferum HOM05D006355 ORTHO05D008284 9.6e-52 208.0 313 41.9
VMungo1215G0260 Vigna mungo HOM05D006355 ORTHO05D008284 1.3e-51 207.6 293 46.4
AT2G19380 Arabidopsis thaliana HOM05D006355 ORTHO05D011679 1.6e-51 207.2 336 41.1
PSO832G0549 Papaver somniferum HOM05D006355 ORTHO05D008284 2.8e-51 206.5 312 40.7
AL3G48950 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 4.8e-51 205.7 325 42.2
EL10Ac8g19156 Beta vulgaris HOM05D006355 ORTHO05D008284 1.5e-49 200.7 402 36.8
SEGI_15381 Sequoiadendron giganteum HOM05D006355 ORTHO05D008284 4.3e-44 182.6 285 38.6
HPP92_009733 Vanilla planifolia HOM05D006355 ORTHO05D008284 6.2e-43 178.7 323 36.8
Pp3c3_280 Physcomitrium patens HOM05D006355 ORTHO05D008284 4.0e-42 176.0 292 39.4
Mapoly0108s0017 Marchantia polymorpha HOM05D006355 ORTHO05D008284 1.3e-37 161.0 215 43.3
CBR_g39727 Chara braunii HOM05D006355 ORTHO05D008284 9.6e-36 154.8 177 46.3
SMO200G0211 Selaginella moellendorffii HOM05D006355 ORTHO05D008284 2.6e-33 146.7 290 33.4
AagrBONN_evm.TU.Sc2ySwM_228.3887 Anthoceros agrestis HOM05D006355 ORTHO05D008284 3.8e-32 142.9 250 38.4
PRCOL_00003845 Prasinoderma coloniale HOM05D006355 ORTHO05D008284 1.0e-24 118.2 194 35.6
SGA_v2.0_scaffold23G10049 Striga asiatica HOM05D006355 ORTHO05D008284 3.8e-24 116.3 318 30.5
Cre17.g701050 Chlamydomonas reinhardtii HOM05D006355 ORTHO05D008284 6.5e-24 115.5 137 43.1
unitig_8.g3528 Utricularia gibba HOM05D001583 ORTHO05D001900 7.2e-23 112.1 291 32.3
MCO07G733 Micromonas commoda HOM05D006355 ORTHO05D008284 1.8e-21 107.5 138 40.6
Migut.B00896 Erythranthe guttata HOM05D002142 ORTHO05D001189 3.7e-19 99.8 124 49.2
SHI23456 Sapria himalayana HOM05D006355 ORTHO05D008284 1.4e-18 97.8 57 68.4
SHI30666 Sapria himalayana HOM05D006355 ORTHO05D008284 1.5e-17 94.4 57 64.9
CSS0037261 Camellia sinensis var. sinensis HOM05D006355 ORTHO05D008284 4.7e-14 82.8 262 32.8
SHI30664 Sapria himalayana HOM05D006355 ORTHO05D008284 3.9e-13 79.7 190 35.8
Aqoxy7G02122 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 2.8e-11 73.6 209 32.5
Aqoxy4G01928 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 4.1e-10 69.7 209 32.1
Os01g0583300 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D300111 1.1e-07 61.6 41 70.7


User provided reference genes

Program Settings