Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G42790 Arabidopsis lyrata HOM05D004162 ORTHO05D004543 1.9e-283 978.4 468 100.0
AT2G05210 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 3.7e-250 867.8 467 88.7
CARHR103050 Cardamine hirsuta HOM05D004162 ORTHO05D004543 1.4e-212 743.0 474 77.2
Sp6g08970 Schrenkiella parvula HOM05D004162 ORTHO05D004543 2.0e-203 712.6 472 75.4
Thhalv10028628m.g Eutrema salsugineum HOM05D004162 ORTHO05D004543 1.8e-196 689.5 467 73.7
BolC9t55513H Brassica oleracea HOM05D004162 ORTHO05D004543 7.8e-168 594.3 477 65.6
BcaC04g21892 Brassica carinata HOM05D004162 ORTHO05D004543 8.7e-167 590.9 476 66.0
C09p26100 Brassica napus HOM05D004162 ORTHO05D004543 8.7e-167 590.9 476 66.0
BraA09t37672Z Brassica rapa HOM05D004162 ORTHO05D004543 7.3e-166 587.8 478 65.3
A09p20680 Brassica napus HOM05D004162 ORTHO05D004543 2.4e-164 582.8 478 65.5
Aa31LG5G17260 Aethionema arabicum HOM05D004162 ORTHO05D004543 2.6e-163 579.3 470 62.6
Carub.0003s2670 Capsella rubella HOM05D004162 ORTHO05D004543 2.3e-159 566.2 353 79.3
BcaB07g30993 Brassica carinata HOM05D004162 ORTHO05D004543 4.8e-157 558.5 465 63.9
THA.LOC104812555 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 3.8e-146 522.3 472 56.4
Haze_18859 Corylus avellana HOM05D004162 ORTHO05D004543 3.7e-101 372.9 471 42.9
Lj5C158G4 Lonicera japonica HOM05D004162 ORTHO05D004543 3.1e-100 369.8 484 44.0
GSVIVG01008445001 Vitis vinifera HOM05D004162 ORTHO05D004543 1.2e-99 367.9 477 43.6
Nn4g24245 Nelumbo nucifera HOM05D004162 ORTHO05D004543 7.7e-99 365.2 477 42.3
Cfa019653 Carpinus fangiana HOM05D004162 ORTHO05D004543 7.2e-97 358.6 477 41.3
Manes.06G005900 Manihot esculenta HOM05D004162 ORTHO05D004543 9.5e-97 358.2 441 43.8
CiPaw.15G143600 Carya illinoinensis HOM05D004162 ORTHO05D004543 8.0e-96 355.1 474 42.0
Cc04_g06230 Coffea canephora HOM05D004162 ORTHO05D004543 1.2e-94 351.3 480 41.9
CSS0046385 Camellia sinensis var. sinensis HOM05D004162 ORTHO05D004543 3.4e-94 349.7 484 40.1
TAR371G1103 Trochodendron aralioides HOM05D004162 ORTHO05D004543 9.8e-94 348.2 475 41.1
Ciclev10008209m.g Citrus clementina HOM05D004162 ORTHO05D004543 2.9e-93 346.7 472 40.3
TWI81G0681 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 1.4e-92 344.4 479 40.3
Hma1.2p1_3150F.1_g333200 Hydrangea macrophylla HOM05D004162 ORTHO05D004543 1.2e-91 341.3 482 40.2
Lsat_1_v5_gn_2_63961 Lactuca sativa HOM05D004162 ORTHO05D004543 2.0e-91 340.5 473 42.1
ClCG04G010610 Citrullus lanatus HOM05D004162 ORTHO05D004543 2.9e-90 336.7 470 39.6
CsaV3_1G007180 Cucumis sativus L. HOM05D004162 ORTHO05D004543 4.3e-89 332.8 474 38.4
ECA238G4801 Erigeron canadensis HOM05D004162 ORTHO05D004543 4.3e-89 332.8 475 39.4
Ah.04g164220 Amaranthus hybridus HOM05D004162 ORTHO05D004543 7.3e-89 332.0 482 40.7
EL10Ac4g08358 Beta vulgaris HOM05D004162 ORTHO05D004543 1.2e-88 331.3 526 39.4
Sed0019203 Sechium edule HOM05D004162 ORTHO05D004543 1.2e-88 331.3 468 38.7
Eucgr.B00998 Eucalyptus grandis HOM05D004162 ORTHO05D004543 2.1e-88 330.5 478 38.7
Atru.chr9.1725 Acer truncatum HOM05D004162 ORTHO05D004543 3.6e-88 329.7 483 40.0
Atru.chr9.1709 Acer truncatum HOM05D004162 ORTHO05D004543 4.7e-88 329.3 483 39.8
Peaxi162Scf00050g02313 Petunia axillaris HOM05D004162 ORTHO05D004543 4.4e-86 322.8 481 39.3
Oeu046631.1 Olea europaea HOM05D004162 ORTHO05D004543 2.2e-85 320.5 472 40.7
HanXRQChr14g0447361 Helianthus annuus HOM05D004162 ORTHO05D004543 2.9e-85 320.1 478 38.9
Migut.D01539 Erythranthe guttata HOM05D004162 ORTHO05D004543 3.7e-85 319.7 475 40.0
Thecc.03G055600 Theobroma cacao HOM05D004162 ORTHO05D004543 1.4e-84 317.8 458 39.7
CANSAT54G2092 Cannabis sativa HOM05D004162 ORTHO05D004543 2.4e-84 317.0 478 37.7
CANSAT80G1525 Cannabis sativa HOM05D004162 ORTHO05D004543 3.2e-84 316.6 478 38.1
QL10p029785 Quercus lobata HOM05D004162 ORTHO05D004543 5.4e-84 315.8 559 35.2
SalBow3G1690 Salvia bowleyana HOM05D004162 ORTHO05D004543 9.2e-84 315.1 472 39.6
SalBow3G1953 Salvia bowleyana HOM05D004162 ORTHO05D004543 9.2e-84 315.1 472 39.6
Dinv08781 Davidia involucrata HOM05D004162 ORTHO05D004543 7.8e-83 312.0 427 41.2
SGA_v2.0_scaffold172G39016 Striga asiatica HOM05D004162 ORTHO05D004543 1.7e-82 310.8 487 38.6
Aqoxy6G00116 Aquilegia oxysepala HOM05D004162 ORTHO05D004543 2.3e-82 310.5 470 38.3
Sopen02g019390 Solanum pennellii HOM05D004162 ORTHO05D004543 2.3e-82 310.5 476 38.0
Solyc02g070300.4 Solanum lycopersicum HOM05D004162 ORTHO05D004543 6.6e-82 308.9 476 37.8
PGR083G0911 Punica granatum HOM05D004162 ORTHO05D004543 1.5e-81 307.8 480 38.3
PGSC0003DMG400021171 Solanum tuberosum HOM05D004162 ORTHO05D004543 1.5e-81 307.8 480 36.9
MSTRG.9305 Avicennia marina HOM05D004162 ORTHO05D004543 3.6e-80 303.1 478 38.1
Lalb_Chr05g0221631 Lupinus albus HOM05D004162 ORTHO05D004543 4.7e-80 302.8 477 37.3
MBI08_g04930_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 1.8e-79 300.8 465 37.8
MBI07_g11051_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 3.1e-79 300.1 475 37.3
Duzib205G1017 Durio zibethinus HOM05D004162 ORTHO05D004543 6.8e-79 298.9 473 38.1
MELO3C002134.2 Cucumis melo HOM05D004162 ORTHO05D004543 1.2e-78 298.1 480 36.7
CAN.G660.38 Capsicum annuum HOM05D004162 ORTHO05D004543 2.0e-78 297.4 475 35.8
Nn3g21925 Nelumbo nucifera HOM05D004162 ORTHO05D004543 4.9e-77 292.7 477 35.8
Psat4g000200 Pisum sativum HOM05D004162 ORTHO05D004543 9.2e-76 288.5 488 36.7
unitig_22.g6151 Utricularia gibba HOM05D004162 ORTHO05D004543 2.7e-75 287.0 480 36.5
PSO210G3845 Papaver somniferum HOM05D004162 ORTHO05D004543 3.9e-74 283.1 533 34.9
MD06G1227400 Malus domestica HOM05D004162 ORTHO05D004543 2.1e-72 277.3 473 36.6
RcHm_v2.0_Chr7g0178331 Rosa chinensis HOM05D004162 ORTHO05D004543 8.1e-72 275.4 486 35.2
ATR0594G087 Amborella trichopoda HOM05D004162 ORTHO05D004543 5.2e-71 272.7 483 34.6
Ca_17185_v3 Cicer arietinum L. HOM05D004162 ORTHO05D004543 5.8e-70 269.2 488 34.8
HPP92_005364 Vanilla planifolia HOM05D004162 ORTHO05D004543 2.4e-68 263.8 481 34.9
Peaxi162Scf00420g00077 Petunia axillaris HOM05D004162 ORTHO05D004543 7.1e-68 262.3 482 35.5
Cfa011869 Carpinus fangiana HOM05D004162 ORTHO05D004543 1.6e-67 261.2 483 36.0
Haze_09240 Corylus avellana HOM05D004162 ORTHO05D004543 1.6e-67 261.2 482 35.7
FAN14G2905 Fragaria x ananassa HOM05D004162 ORTHO05D004543 1.6e-67 261.2 486 34.8
FvH4_6g53500 Fragaria vesca HOM05D004162 ORTHO05D004543 2.1e-67 260.8 486 34.8
Nitab4.5_0000869g0150 Nicotiana tabacum HOM05D004162 ORTHO05D004543 2.1e-67 260.8 485 34.2
BolC9t59794H Brassica oleracea HOM05D004162 ORTHO05D004543 4.6e-67 259.6 471 33.5
PSO339G4834 Papaver somniferum HOM05D004162 ORTHO05D004543 7.8e-67 258.8 465 35.1
Gorai.008G207900 Gossypium raimondii HOM05D004162 ORTHO05D004543 1.0e-66 258.5 475 34.7
MD13G1006200 Malus domestica HOM05D004162 ORTHO05D004543 1.0e-66 258.5 482 35.3
Medtr8g107380 Medicago truncatula HOM05D004162 ORTHO05D004543 2.3e-66 257.3 483 34.4
Gohir.A12G191000 Gossypium hirsutum HOM05D004162 ORTHO05D004543 3.0e-66 256.9 475 34.3
Gohir.D12G193100 Gossypium hirsutum HOM05D004162 ORTHO05D004543 3.0e-66 256.9 475 34.5
Thhalv10013532m.g Eutrema salsugineum HOM05D004162 ORTHO05D004543 5.1e-66 256.1 469 33.9
FAN05G0184 Fragaria x ananassa HOM05D004162 ORTHO05D004543 5.1e-66 256.1 488 34.4
Sp6g36540 Schrenkiella parvula HOM05D004162 ORTHO05D004543 1.5e-65 254.6 469 33.7
TAR636G2328 Trochodendron aralioides HOM05D004162 ORTHO05D004543 1.9e-65 254.2 383 39.7
DCAR_003065 Daucus carota HOM05D004162 ORTHO05D004543 3.3e-65 253.4 398 38.7
Nitab4.5_0001756g0030 Nicotiana tabacum HOM05D004162 ORTHO05D004543 3.3e-65 253.4 423 36.9
C09p70490 Brassica napus HOM05D004162 ORTHO05D004543 4.3e-65 253.1 471 34.2
BraA10t45047Z Brassica rapa HOM05D004162 ORTHO05D004543 4.3e-65 253.1 473 33.6
A10p30070 Brassica napus HOM05D004162 ORTHO05D004543 2.8e-64 250.4 471 34.0
AT5G06310 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 6.2e-64 249.2 471 32.9
arahy.Tifrunner.gnm1.ann1.681ID1 Arachis hypogaea HOM05D004162 ORTHO05D004543 6.2e-64 249.2 477 33.8
Glyma.05G246600 Glycine max HOM05D004162 ORTHO05D004543 6.2e-64 249.2 478 32.8
FAN02G2531 Fragaria x ananassa HOM05D004162 ORTHO05D004543 1.4e-63 248.1 484 34.5
AL6G16350 Arabidopsis lyrata HOM05D004162 ORTHO05D004543 1.8e-63 247.7 475 33.1
Carub.0006s0520 Capsella rubella HOM05D004162 ORTHO05D004543 4.0e-63 246.5 470 32.1
arahy.Tifrunner.gnm1.ann1.7MCX13 Arachis hypogaea HOM05D004162 ORTHO05D004543 5.2e-63 246.1 477 33.5
Oeu011444.1 Olea europaea HOM05D004162 ORTHO05D004543 5.2e-63 246.1 470 34.7
Glyma.08G054800 Glycine max HOM05D004162 ORTHO05D004543 1.5e-62 244.6 458 34.1
VMungo0251G2472 Vigna mungo HOM05D004162 ORTHO05D004543 1.5e-62 244.6 476 32.8
Gorai.001G082700 Gossypium raimondii HOM05D004162 ORTHO05D004543 2.0e-62 244.2 478 36.0
PSO513G0134 Papaver somniferum HOM05D004162 ORTHO05D004543 2.0e-62 244.2 465 33.8
Nitab4.5_0005963g0070 Nicotiana tabacum HOM05D004162 ORTHO05D004543 3.4e-62 243.4 478 33.9
Aqoxy7G03636 Aquilegia oxysepala HOM05D000527 ORTHO05D004543 4.4e-62 243.0 400 35.8
CARHR207050 Cardamine hirsuta HOM05D004162 ORTHO05D004543 7.6e-62 242.3 470 32.8
arahy.Tifrunner.gnm1.ann1.B7AHJA Arachis hypogaea HOM05D004162 ORTHO05D004543 1.3e-61 241.5 477 33.1
FAN09G1804 Fragaria x ananassa HOM05D004162 ORTHO05D004543 1.7e-61 241.1 521 32.2
Gohir.D07G078300 Gossypium hirsutum HOM05D004162 ORTHO05D004543 3.8e-61 240.0 478 35.1
BcaC06g32364 Brassica carinata HOM05D004162 ORTHO05D004543 4.9e-61 239.6 468 32.1
Prupe.5G233900 Prunus persica HOM05D004162 ORTHO05D004543 3.2e-60 236.9 390 38.2
COL.COLO4_05717 Corchorus olitorius HOM05D004162 ORTHO05D004543 1.6e-59 234.6 387 36.7
THA.LOC104810218 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 4.6e-59 233.0 490 31.6
THA.LOC104826807 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 4.6e-59 233.0 490 31.6
FAN02G1371 Fragaria x ananassa HOM05D004162 ORTHO05D004543 7.8e-59 232.3 513 32.0
Actinidia07535 Actinidia chinensis HOM05D004162 ORTHO05D004543 3.9e-58 229.9 476 32.1
Zm00001eb433700 Zea mays HOM05D004162 ORTHO05D004543 6.9e-55 219.2 471 33.3
Cc07_g00810 Coffea canephora HOM05D004162 ORTHO05D004543 2.0e-54 217.6 472 33.7
Atru.chr1.59 Acer truncatum HOM05D004162 ORTHO05D004543 5.8e-54 216.1 447 31.3
Pp3c18_21900 Physcomitrium patens HOM05D004162 ORTHO05D004543 5.8e-54 216.1 491 29.7
Rhsim08G0126500 Rhododendron simsii HOM05D004162 ORTHO05D004543 2.9e-53 213.8 247 44.1
CANSAT78G2305 Cannabis sativa HOM05D004162 ORTHO05D004543 3.8e-53 213.4 482 31.5
TWI75G0727 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 3.8e-53 213.4 477 31.4
PSO832G0101 Papaver somniferum HOM05D004162 ORTHO05D004543 4.2e-52 209.9 468 32.5
AUR62037555 Chenopodium quinoa HOM05D004162 ORTHO05D004543 7.1e-52 209.1 335 38.2
Rhsim02G0000200 Rhododendron simsii HOM05D004162 ORTHO05D004543 9.3e-52 208.8 406 34.5
SHI19078 Sapria himalayana HOM05D004162 ORTHO05D004543 9.3e-52 208.8 248 44.8
AagrBONN_evm.TU.Sc2ySwM_228.478 Anthoceros agrestis HOM05D004162 ORTHO05D004543 1.2e-51 208.4 487 31.6
Mapoly0002s0230 Marchantia polymorpha HOM05D004162 ORTHO05D004543 8.7e-50 202.2 497 29.2
Phvul.002G330500 Phaseolus vulgaris HOM05D004162 ORTHO05D004543 1.3e-48 198.4 308 38.6
vmacro09753 Vaccinium macrocarpon HOM05D004162 ORTHO05D004543 9.9e-46 188.7 308 39.0
SMO358G0036 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 4.9e-45 186.4 514 29.8
Ciclev10005180m.g Citrus clementina HOM05D004162 ORTHO05D004543 1.4e-44 184.9 386 34.2
Hma1.2p1_0013F.1_g007880 Hydrangea macrophylla HOM05D004162 ORTHO05D004543 1.9e-44 184.5 303 39.6
AT2G04395 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 1.1e-39 168.7 90 90.0
Potri.012G046400 Populus trichocarpa HOM05D004162 ORTHO05D004543 4.5e-38 163.3 265 38.5
TPR.G1445 Trifolium pratense HOM05D004162 ORTHO05D004543 7.6e-38 162.5 289 36.7
Gohir.A07G073600 Gossypium hirsutum HOM05D004162 ORTHO05D004543 3.8e-37 160.2 331 33.8
CDE11G0199 Ceratophyllum demersum HOM05D004162 ORTHO05D004543 8.4e-37 159.1 309 35.9
VMungo0251G0610 Vigna mungo HOM05D004162 ORTHO05D004543 8.4e-37 159.1 442 28.1
Sc04g0004810 Simmondsia chinensis HOM05D004162 ORTHO05D004543 8.7e-34 149.1 327 33.0
Dinv27223 Davidia involucrata HOM05D004162 ORTHO05D004543 7.4e-33 146.0 315 30.5
unitig_90.g27442 Utricularia gibba HOM05D004162 ORTHO05D004543 1.6e-32 144.8 464 26.9
AUR62019586 Chenopodium quinoa HOM05D004162 ORTHO05D004543 7.6e-30 136.0 136 50.0
CiPaw.09G010800 Carya illinoinensis HOM05D004162 ORTHO05D004543 2.9e-29 134.0 197 39.1
CDE02G0891 Ceratophyllum demersum HOM05D004162 ORTHO05D004543 2.5e-25 120.9 173 36.4
Lj4g0021249 Lotus japonicus HOM05D002609 ORTHO05D002820 3.3e-25 120.6 284 32.7
AUR62013945 Chenopodium quinoa HOM05D004162 ORTHO05D004543 7.4e-25 119.4 126 47.6
Cfa023195 Carpinus fangiana HOM05D004162 ORTHO05D004543 3.4e-22 110.5 302 32.5
CBR_g32246 Chara braunii HOM05D004162 ORTHO05D004543 5.9e-22 109.8 420 24.8
Hund17739 Selenicereus undatus HOM05D004162 ORTHO05D004543 8.8e-18 95.9 129 38.0
CiPaw.09G010700 Carya illinoinensis HOM05D004162 ORTHO05D004543 3.4e-14 84.0 113 35.4
Sabra12G0032500 Salix brachista HOM05D004162 ORTHO05D004543 4.5e-14 83.6 78 50.0
CBR_g34767 Chara braunii HOM05D004162 ORTHO05D004543 1.7e-13 81.6 310 24.2
HPP92_005316 Vanilla planifolia HOM05D004162 ORTHO05D004543 2.2e-13 81.3 216 28.2
SEGI_33776 Sequoiadendron giganteum HOM05D004162 ORTHO05D004543 2.7e-11 74.3 165 29.1
SEGI_28626 Sequoiadendron giganteum HOM05D004162 ORTHO05D004543 1.4e-07 62.0 132 34.1
vmacro09754 Vaccinium macrocarpon HOM05D004162 ORTHO05D004543 5.9e-06 56.6 86 27.9


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