Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 2.4e-170 602.1 303 100.0
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 3.4e-164 581.6 301 96.3
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 5.6e-159 564.3 302 94.0
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 1.3e-155 553.1 300 91.3
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 4.5e-148 528.1 306 87.9
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 4.9e-147 524.6 305 87.2
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 3.2e-146 521.9 305 86.2
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 3.2e-146 521.9 305 86.2
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 5.5e-146 521.2 304 86.2
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 1.2e-145 520.0 306 86.9
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 4.6e-145 518.1 305 85.9
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 1.0e-144 516.9 306 86.6
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 2.3e-144 515.8 304 84.9
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 2.3e-144 515.8 304 84.9
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 3.3e-143 511.9 304 84.9
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 9.6e-143 510.4 304 84.5
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 1.1e-133 480.3 295 82.7
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 4.5e-132 474.9 304 79.9
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 9.7e-127 457.2 309 74.1
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 3.6e-121 438.7 307 75.2
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 2.2e-110 402.9 312 67.9
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 3.7e-110 402.1 311 67.5
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 3.1e-109 399.1 304 69.1
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 2.0e-108 396.4 297 69.0
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 3.5e-108 395.6 301 69.1
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 1.3e-107 393.7 304 67.4
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 6.5e-107 391.3 288 69.4
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 8.5e-107 391.0 302 68.9
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 8.5e-107 391.0 301 67.8
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 8.5e-107 391.0 300 67.7
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 1.9e-106 389.8 280 72.1
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 3.2e-106 389.0 301 67.4
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 4.2e-106 388.7 301 67.4
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 5.5e-106 388.3 306 67.0
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 5.5e-106 388.3 302 68.2
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 5.5e-106 388.3 292 69.2
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 7.2e-106 387.9 299 68.9
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 1.6e-105 386.7 303 66.7
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 2.1e-105 386.3 288 69.1
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 3.6e-105 385.6 249 77.1
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 8.0e-105 384.4 266 71.4
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 8.0e-105 384.4 302 65.2
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 1.0e-104 384.0 266 71.4
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 1.8e-104 383.3 288 68.4
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 2.3e-104 382.9 298 66.4
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 4.0e-104 382.1 266 71.4
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 4.0e-104 382.1 292 65.8
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 6.8e-104 381.3 302 66.6
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 8.8e-104 380.9 266 71.4
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 1.2e-103 380.6 302 67.2
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 1.2e-103 380.6 251 74.9
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 1.2e-103 380.6 304 66.4
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 1.5e-103 380.2 248 75.0
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 1.5e-103 380.2 281 68.3
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 1.5e-103 380.2 276 72.1
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 2.6e-103 379.4 312 64.1
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 3.4e-103 379.0 307 64.5
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 4.4e-103 378.6 305 65.6
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 1.7e-102 376.7 314 65.3
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 2.2e-102 376.3 239 76.6
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 4.8e-102 375.2 269 72.5
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 6.3e-102 374.8 288 67.7
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 1.4e-101 373.6 305 65.2
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 3.1e-101 372.5 290 66.6
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 3.1e-101 372.5 285 67.4
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 9.1e-101 370.9 242 75.6
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 9.1e-101 370.9 256 73.4
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 1.6e-100 370.2 287 67.2
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 1.6e-100 370.2 240 76.2
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 4.5e-100 368.6 276 68.8
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 1.0e-99 367.5 263 68.8
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 1.3e-99 367.1 285 67.0
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 1.7e-99 366.7 280 67.1
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 2.3e-99 366.3 271 69.4
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 2.9e-99 365.9 308 63.3
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 2.9e-99 365.9 287 65.9
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 3.8e-99 365.5 278 68.3
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 6.5e-99 364.8 297 64.6
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 8.6e-99 364.4 264 68.9
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 1.1e-98 364.0 268 69.8
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 2.5e-98 362.8 264 69.7
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 1.6e-97 360.1 289 64.4
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 3.6e-97 359.0 245 72.2
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 3.6e-97 359.0 251 68.9
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 6.1e-97 358.2 245 72.2
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 5.2e-96 355.1 245 72.2
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 2.0e-95 353.2 293 64.2
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 2.4e-93 346.3 265 64.9
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 5.4e-93 345.1 240 72.5
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 2.0e-92 343.2 280 65.0
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 3.8e-91 339.0 240 67.5
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 2.1e-89 333.2 216 76.9
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 2.8e-89 332.8 309 61.8
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 8.0e-89 331.3 242 69.4
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 1.0e-88 330.9 213 76.5
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 5.7e-87 325.1 228 72.4
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 3.9e-83 312.4 255 62.7
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 5.6e-82 308.5 220 70.9
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 1.2e-81 307.4 239 67.4
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 1.4e-80 303.9 315 56.8
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 4.0e-80 302.4 257 65.8
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 6.8e-80 301.6 253 65.2
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 6.8e-80 301.6 246 62.2
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 2.6e-79 299.7 254 64.6
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 7.0e-77 291.6 225 66.2
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 3.5e-76 289.3 204 71.6
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 1.5e-71 273.9 246 57.7
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 3.4e-71 272.7 219 65.8
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 2.2e-70 270.0 182 74.7
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 3.0e-67 259.6 295 51.5
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 3.4e-63 246.1 179 70.9
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 6.0e-60 235.3 244 52.9
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 2.8e-57 226.5 292 46.2
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 4.0e-48 196.1 129 74.4
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 1.5e-42 177.6 117 71.8
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 1.6e-36 157.5 115 67.8
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 2.6e-31 140.2 112 61.6
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 4.2e-29 132.9 95 64.2
Hma1.2p1_0161F.1_g071660 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 1.6e-28 131.0 82 75.6
CDE04G0367 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 1.5e-23 114.4 85 64.7
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 3.4e-23 113.2 85 65.9
BcaB06g26875 Brassica carinata HOM05D006330 ORTHO05D008013 8.8e-19 98.6 64 81.2
VMungo1383G2211 Vigna mungo HOM05D006330 ORTHO05D434633 2.6e-10 70.5 48 70.8


User provided reference genes

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