Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 8.1e-233 810.1 415 100.0
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 3.0e-227 791.6 416 97.8
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 8.6e-227 790.0 416 97.1
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 9.6e-226 786.6 415 96.9
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 1.6e-225 785.8 415 95.2
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 1.1e-224 783.1 415 96.1
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 1.5e-223 779.2 415 95.2
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 4.2e-213 744.6 418 93.8
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 1.6e-212 742.7 418 93.3
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 2.7e-212 741.9 415 89.9
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 3.5e-212 741.5 416 93.0
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 3.5e-212 741.5 416 93.0
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 3.5e-212 741.5 416 93.0
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 4.0e-208 728.0 419 92.6
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 3.4e-175 618.6 429 75.1
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 7.2e-165 584.3 415 69.9
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 9.4e-165 583.9 415 69.6
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 1.6e-164 583.2 415 69.6
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 2.6e-162 575.9 416 69.2
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 1.3e-161 573.5 418 69.4
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 7.0e-160 567.8 416 68.3
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 4.5e-159 565.1 421 69.1
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 4.5e-159 565.1 416 67.8
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 1.0e-158 563.9 421 68.9
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 6.5e-158 561.2 418 67.7
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 2.5e-157 559.3 419 68.7
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 3.2e-157 558.9 417 67.9
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 5.5e-157 558.1 418 67.5
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 1.6e-156 556.6 418 67.5
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 2.1e-156 556.2 426 67.6
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 4.7e-156 555.1 424 67.7
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 1.0e-155 553.9 425 66.6
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 1.4e-155 553.5 425 68.0
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 3.0e-155 552.4 425 67.5
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 8.8e-155 550.8 415 65.3
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 8.8e-155 550.8 417 67.4
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 1.2e-154 550.4 426 66.9
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 1.2e-154 550.4 417 68.1
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 1.2e-154 550.4 409 67.0
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 1.5e-154 550.1 417 67.6
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 1.5e-154 550.1 417 67.9
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.6e-154 549.3 424 66.3
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 3.4e-154 548.9 426 66.7
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 5.7e-154 548.1 426 66.4
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 2.2e-153 546.2 425 65.6
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 2.8e-153 545.8 416 66.8
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.4e-152 543.5 441 63.7
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 2.7e-151 539.3 415 67.2
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 1.0e-150 537.3 416 67.8
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 2.9e-150 535.8 420 66.7
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 5.0e-150 535.0 415 68.2
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 1.1e-149 533.9 427 66.0
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 1.5e-149 533.5 421 66.0
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 2.5e-149 532.7 420 64.5
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 3.2e-149 532.3 417 65.5
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 3.2e-149 532.3 417 65.9
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 7.2e-149 531.2 415 66.5
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 9.4e-149 530.8 422 65.6
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 1.2e-148 530.4 428 64.7
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 1.6e-148 530.0 415 65.3
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 2.1e-148 529.6 423 63.8
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 2.1e-148 529.6 418 65.3
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 2.7e-148 529.3 415 65.5
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 1.4e-147 526.9 415 65.1
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 4.9e-145 518.5 416 65.9
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 8.3e-145 517.7 417 66.4
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 8.3e-145 517.7 417 66.4
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 1.4e-144 516.9 421 62.7
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 7.0e-144 514.6 417 65.9
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 9.2e-144 514.2 415 63.9
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 1.2e-143 513.8 415 65.3
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 1.2e-143 513.8 414 65.2
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 5.6e-141 505.0 420 63.8
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 2.3e-139 499.6 425 61.9
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 1.5e-138 496.9 422 62.1
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 5.9e-135 485.0 424 60.8
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 1.0e-134 484.2 425 60.0
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 1.6e-132 476.9 419 60.6
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 9.8e-130 467.6 422 59.5
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 1.3e-129 467.2 418 59.8
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 2.0e-127 459.9 416 61.5
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 3.5e-127 459.1 416 60.8
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 6.0e-127 458.4 423 57.4
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 2.3e-126 456.4 415 61.0
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 5.0e-126 455.3 384 62.2
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 6.6e-126 454.9 411 58.9
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 3.3e-125 452.6 413 59.8
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 9.5e-125 451.1 408 59.1
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 8.1e-124 448.0 415 57.8
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 3.7e-121 439.1 406 58.9
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 4.9e-121 438.7 366 61.5
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 8.3e-121 438.0 487 52.0
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 4.1e-120 435.6 408 59.8
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 8.6e-118 427.9 415 59.0
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 2.0e-114 416.8 415 54.5
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 3.9e-110 402.5 259 79.5
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 9.3e-104 381.3 258 74.8
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 6.0e-103 378.6 465 47.1
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 2.8e-100 369.8 272 69.1
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 4.9e-97 359.0 244 73.8
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 9.0e-91 338.2 468 42.9
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 6.0e-87 325.5 427 46.1
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 1.8e-86 323.9 273 63.0
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 8.1e-84 315.1 253 65.2
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 2.0e-82 310.5 420 46.0
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 2.6e-82 310.1 463 42.1
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 3.3e-69 266.5 435 40.7
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 2.5e-64 250.4 386 42.0
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 2.1e-63 247.3 185 68.6
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 5.0e-41 172.9 175 48.0
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 9.5e-32 142.1 191 45.0
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 1.8e-30 137.9 478 28.0
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 2.3e-30 137.5 177 44.6
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 2.6e-29 134.0 463 28.9
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 7.5e-29 132.5 499 24.4
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 1.2e-26 125.2 107 56.1
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 1.4e-22 111.7 70 75.7
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 1.8e-22 111.3 98 58.2
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 4.1e-19 100.1 108 45.4
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 8.3e-12 75.9 106 42.5


User provided reference genes

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