Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G34920 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 5.9e-112 407.9 264 100.0
AUR62002589 Chenopodium quinoa HOM05D001486 ORTHO05D004921 8.7e-07 58.5 42 69.0
AUR62030013 Chenopodium quinoa HOM05D001486 ORTHO05D004921 8.7e-07 58.5 42 69.0
THA.LOC104823681 Tarenaya hassleriana HOM05D001486 ORTHO05D004921 8.7e-07 58.5 42 69.0
TPR.G19252 Trifolium pratense HOM05D001486 ORTHO05D004921 1.9e-06 57.4 42 64.3
BcaB02g06554 Brassica carinata HOM05D001486 ORTHO05D004921 2.5e-06 57.0 42 64.3
BcaC05g25406 Brassica carinata HOM05D001486 ORTHO05D004921 2.5e-06 57.0 42 64.3
C05p12830 Brassica napus HOM05D001486 ORTHO05D004921 2.5e-06 57.0 42 64.3
BolC5t30028H Brassica oleracea HOM05D001486 ORTHO05D004921 2.5e-06 57.0 42 64.3
Glyma.08G045900 Glycine max HOM05D001486 ORTHO05D004921 2.5e-06 57.0 42 61.9
Lj4g0010019 Lotus japonicus HOM05D001486 ORTHO05D004921 3.3e-06 56.6 42 61.9
Phvul.002G321200 Phaseolus vulgaris HOM05D001486 ORTHO05D004921 3.3e-06 56.6 42 61.9
Psat7g007960 Pisum sativum HOM05D001486 ORTHO05D004921 3.3e-06 56.6 42 64.3
VMungo0251G0466 Vigna mungo HOM05D001486 ORTHO05D004921 3.3e-06 56.6 42 61.9
Ah.13g072990 Amaranthus hybridus HOM05D001486 ORTHO05D004921 4.3e-06 56.2 42 66.7
Gorai.005G157100 Gossypium raimondii HOM05D001486 ORTHO05D004921 4.3e-06 56.2 42 66.7
Sc11g0004180 Simmondsia chinensis HOM05D001486 ORTHO05D004921 4.3e-06 56.2 42 66.7
Cpa.g.sc2.194 Carica papaya HOM05D001486 ORTHO05D004921 5.7e-06 55.8 42 64.3
CiPaw.06G051900 Carya illinoinensis HOM05D001486 ORTHO05D004921 5.7e-06 55.8 42 66.7
Haze_10881 Corylus avellana HOM05D001486 ORTHO05D004921 5.7e-06 55.8 42 66.7
MD13G1020400 Malus domestica HOM05D001486 ORTHO05D004921 5.7e-06 55.8 42 66.7
Manes.17G083900 Manihot esculenta HOM05D001486 ORTHO05D004921 5.7e-06 55.8 42 66.7
Prupe.1G333300 Prunus persica HOM05D001486 ORTHO05D004921 5.7e-06 55.8 42 66.7
QL03p035815 Quercus lobata HOM05D001486 ORTHO05D004921 5.7e-06 55.8 42 66.7
TWI74G0959 Tripterygium wilfordii HOM05D001486 ORTHO05D004921 5.7e-06 55.8 42 66.7
AL1G32070 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 7.4e-06 55.5 42 61.9
AT1G14850 Arabidopsis thaliana HOM05D001486 ORTHO05D004921 7.4e-06 55.5 42 61.9
Carub.0001s1464 Capsella rubella HOM05D001486 ORTHO05D004921 7.4e-06 55.5 42 61.9
CARHR015390 Cardamine hirsuta HOM05D001486 ORTHO05D004921 7.4e-06 55.5 42 61.9
Gohir.A03G115400 Gossypium hirsutum HOM05D001486 ORTHO05D004921 7.4e-06 55.5 42 64.3
Gohir.D02G139700 Gossypium hirsutum HOM05D001486 ORTHO05D004921 7.4e-06 55.5 42 64.3
Atru.chr11.925 Acer truncatum HOM05D001486 ORTHO05D004921 9.7e-06 55.1 42 61.9
AL1G26870 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 9.7e-06 55.1 42 59.5
BcaC07g41534 Brassica carinata HOM05D001486 ORTHO05D004921 9.7e-06 55.1 42 61.9
A09p61750 Brassica napus HOM05D001486 ORTHO05D004921 9.7e-06 55.1 42 61.9
C08p45360 Brassica napus HOM05D001486 ORTHO05D004921 9.7e-06 55.1 42 61.9
BolC8t52091H Brassica oleracea HOM05D001486 ORTHO05D004921 9.7e-06 55.1 42 61.9
COL.COLO4_16588 Corchorus olitorius HOM05D001486 ORTHO05D004921 9.7e-06 55.1 42 66.7
MELO3C026441.2 Cucumis melo HOM05D001486 ORTHO05D004921 9.7e-06 55.1 42 64.3
CsaV3_5G015740 Cucumis sativus L. HOM05D001486 ORTHO05D004921 9.7e-06 55.1 42 64.3
Dinv10475 Davidia involucrata HOM05D001486 ORTHO05D004921 9.7e-06 55.1 42 61.9
Duzib268G0355 Durio zibethinus HOM05D001486 ORTHO05D004921 9.7e-06 55.1 42 64.3
Glyma.05G238800 Glycine max HOM05D001486 ORTHO05D004921 9.7e-06 55.1 42 59.5
Sabra08G0102800 Salix brachista HOM05D001486 ORTHO05D004921 9.7e-06 55.1 42 64.3
Sed0010499 Sechium edule HOM05D001486 ORTHO05D004921 9.7e-06 55.1 42 64.3
TAR629G0611 Trochodendron aralioides HOM05D001486 ORTHO05D004921 9.7e-06 55.1 42 64.3
GSVIVG01011661001 Vitis vinifera HOM05D001486 ORTHO05D004921 9.7e-06 55.1 42 64.3


User provided reference genes

Program Settings