Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 2.7e-132 475.3 241 100.0
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 8.8e-131 470.3 241 98.3
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 1.6e-127 459.5 241 95.4
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 3.2e-125 451.8 241 93.4
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 7.2e-125 450.7 241 92.9
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 3.6e-124 448.4 241 93.4
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 2.0e-122 442.6 241 91.3
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 7.5e-122 440.7 241 90.9
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 7.5e-122 440.7 241 90.9
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 9.8e-122 440.3 241 91.3
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 4.8e-121 438.0 241 91.3
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 1.8e-120 436.0 232 94.0
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 5.4e-120 434.5 232 93.5
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 4.7e-108 394.8 240 80.4
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 8.9e-107 390.6 241 79.7
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 8.9e-107 390.6 241 80.5
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 1.5e-106 389.8 241 79.3
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 2.0e-106 389.4 241 79.3
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 4.4e-106 388.3 241 79.3
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 4.4e-106 388.3 231 80.5
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 4.4e-106 388.3 210 91.4
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 9.8e-106 387.1 241 80.1
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 9.8e-106 387.1 241 78.8
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 1.3e-105 386.7 241 78.4
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 1.3e-105 386.7 241 78.4
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 1.3e-105 386.7 230 80.9
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 1.3e-105 386.7 241 78.0
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 2.2e-105 386.0 241 78.8
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 4.9e-105 384.8 241 77.2
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 4.9e-105 384.8 241 77.2
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 1.1e-104 383.6 241 75.9
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 1.4e-104 383.3 241 77.6
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 1.4e-104 383.3 241 78.0
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 2.4e-104 382.5 241 76.8
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 2.4e-104 382.5 241 76.3
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 4.1e-104 381.7 253 75.9
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 5.4e-104 381.3 235 77.9
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 9.2e-104 380.6 241 77.2
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 9.2e-104 380.6 232 79.7
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 1.6e-103 379.8 238 77.3
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.7e-103 379.0 235 77.4
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 7.8e-103 377.5 232 77.6
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 1.7e-102 376.3 228 79.8
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 3.9e-102 375.2 221 82.8
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 5.0e-102 374.8 241 75.1
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 5.0e-102 374.8 241 74.7
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 5.0e-102 374.8 238 76.1
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 8.6e-102 374.0 247 75.3
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 1.5e-101 373.2 232 76.7
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 1.5e-101 373.2 236 77.1
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 1.9e-101 372.9 241 73.4
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 2.5e-101 372.5 232 77.6
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 3.3e-101 372.1 232 75.4
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 4.3e-101 371.7 241 75.9
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.2e-100 370.2 237 74.7
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 6.2e-100 367.9 236 74.2
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 8.0e-100 367.5 225 76.4
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 1.0e-99 367.1 243 74.1
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 8.9e-99 364.0 231 77.1
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 2.0e-98 362.8 241 72.6
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 3.4e-98 362.1 241 72.2
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 4.4e-98 361.7 241 71.0
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 2.2e-97 359.4 241 70.5
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 2.2e-97 359.4 231 75.8
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 2.2e-97 359.4 223 77.1
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 2.2e-97 359.4 264 68.6
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 8.3e-97 357.5 260 68.5
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 3.2e-96 355.5 241 70.1
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 3.2e-96 355.5 223 77.6
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 3.2e-96 355.5 225 76.0
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 3.2e-96 355.5 262 68.3
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 7.0e-96 354.4 236 73.7
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 9.2e-96 354.0 252 69.4
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 2.0e-95 352.8 233 74.7
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 6.0e-95 351.3 229 72.5
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 1.0e-94 350.5 238 70.2
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 1.0e-94 350.5 233 74.2
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 1.0e-94 350.5 229 74.2
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 3.0e-94 349.0 233 73.8
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 3.9e-94 348.6 229 73.4
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 1.5e-93 346.7 209 80.4
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 2.8e-92 342.4 241 71.8
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.4e-91 340.1 232 72.0
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 4.0e-91 338.6 282 63.8
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 6.8e-91 337.8 255 67.8
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 6.8e-91 337.8 241 69.7
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 8.9e-91 337.4 240 65.8
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 1.5e-90 336.7 232 71.6
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 2.2e-89 332.8 264 65.2
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 1.5e-85 320.1 232 68.5
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 1.6e-79 300.1 196 76.0
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 1.0e-78 297.4 196 73.5
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 1.1e-77 293.9 231 61.5
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 5.6e-77 291.6 226 61.5
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 7.3e-77 291.2 211 66.8
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 1.8e-75 286.6 229 64.2
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.2e-74 283.9 266 57.9
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 4.4e-74 282.0 236 62.7
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 8.4e-73 277.7 177 76.3
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 6.0e-71 271.6 306 49.0
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 3.0e-70 269.2 237 56.1
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 2.0e-66 256.5 194 69.1
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 7.1e-64 248.1 151 74.8
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 1.3e-62 243.8 231 56.7
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 7.4e-61 238.0 225 52.9
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 7.4e-61 238.0 184 64.7
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 7.4e-61 238.0 184 64.7
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 1.3e-60 237.3 219 51.1
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 4.8e-60 235.3 181 66.3
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 7.1e-56 221.5 194 62.9
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 1.3e-54 217.2 221 49.3
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 2.1e-44 183.3 123 74.8
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 4.5e-42 175.6 128 68.0
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 8.2e-36 154.8 164 51.2
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 2.9e-33 146.4 122 62.3
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 3.3e-29 132.9 78 79.5
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.4e-27 126.7 93 69.9
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 8.5e-25 118.2 71 71.8
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 1.1e-24 117.9 80 68.8
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 4.2e-24 115.9 61 86.9
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 1.8e-22 110.5 55 87.3
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 4.8e-20 102.4 102 56.9
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 1.8e-14 84.0 152 33.6
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 3.3e-13 79.7 69 63.8
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 1.2e-10 71.2 70 55.7


User provided reference genes

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