Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G24080 Arabidopsis lyrata HOM05D000886 ORTHO05D000525 6.7e-136 487.6 302 100.0
Carub.0003s1177 Capsella rubella HOM05D000886 ORTHO05D000525 1.3e-54 217.6 296 48.6
CARHR086940 Cardamine hirsuta HOM05D000886 ORTHO05D000525 1.3e-54 217.6 305 43.6
AL3G24070 Arabidopsis lyrata HOM05D000886 ORTHO05D000525 1.4e-48 197.6 315 48.6
AT3G12410 Arabidopsis thaliana HOM05D000886 ORTHO05D000525 6.8e-48 195.3 299 42.8
BolC1t05224H Brassica oleracea HOM05D000886 ORTHO05D000525 7.8e-44 181.8 301 39.2
BcaC09g48236 Brassica carinata HOM05D000886 ORTHO05D000525 2.1e-41 173.7 299 37.1
CARHR086960 Cardamine hirsuta HOM05D000886 ORTHO05D000525 2.8e-41 173.3 303 37.6
Sp3g10600 Schrenkiella parvula HOM05D000886 ORTHO05D000525 2.8e-41 173.3 304 38.5
Carub.0003s1178 Capsella rubella HOM05D000886 ORTHO05D000525 3.6e-41 172.9 291 39.5
Sp7g04890 Schrenkiella parvula HOM05D000886 ORTHO05D000525 4.8e-41 172.6 303 39.3
AL3G53960 Arabidopsis lyrata HOM05D000886 ORTHO05D000525 6.2e-41 172.2 305 39.7
C01p52870 Brassica napus HOM05D000886 ORTHO05D000525 6.2e-41 172.2 301 37.5
AT3G12420 Arabidopsis thaliana HOM05D000886 ORTHO05D000525 5.3e-40 169.1 232 54.7
C01p52770 Brassica napus HOM05D000886 ORTHO05D000525 5.3e-40 169.1 302 39.4
BcaC09g48242 Brassica carinata HOM05D000886 ORTHO05D000525 9.0e-40 168.3 302 37.4
Carub.0003s3542 Capsella rubella HOM05D000886 ORTHO05D000525 1.2e-39 167.9 302 37.7
BcaB04g21078 Brassica carinata HOM05D000886 ORTHO05D000525 2.2e-38 163.7 302 35.8
AT3G12460 Arabidopsis thaliana HOM05D000886 ORTHO05D000525 4.9e-38 162.5 302 40.1
BolC1t05214H Brassica oleracea HOM05D000886 ORTHO05D000525 8.4e-38 161.8 301 36.9
Thhalv10022087m.g Eutrema salsugineum HOM05D000886 ORTHO05D000525 2.4e-37 160.2 307 36.5
A03p37620 Brassica napus HOM05D002835 ORTHO05D003008 3.2e-37 159.8 289 38.8
Thhalv10021493m.g Eutrema salsugineum HOM05D000886 ORTHO05D000525 9.3e-37 158.3 302 36.8
BcaC09g48243 Brassica carinata HOM05D000886 ORTHO05D000525 2.1e-36 157.1 306 36.6
Carub.0003s1180 Capsella rubella HOM05D000886 ORTHO05D000525 2.7e-36 156.8 299 36.5
AT3G12430 Arabidopsis thaliana HOM05D000886 ORTHO05D000525 4.6e-36 156.0 301 42.2
CARHR086970 Cardamine hirsuta HOM05D000886 ORTHO05D000525 6.6e-35 152.1 301 36.5
AL3G24100 Arabidopsis lyrata HOM05D000886 ORTHO05D000525 4.3e-34 149.4 300 37.3
AT3G12440 Arabidopsis thaliana HOM05D000886 ORTHO05D000525 9.6e-34 148.3 359 47.9
BcaC01g04049 Brassica carinata HOM05D000886 ORTHO05D000525 8.1e-33 145.2 299 38.5
Thhalv10028212m.g Eutrema salsugineum HOM05D000886 ORTHO05D000525 8.1e-33 145.2 299 33.8
AT3G12470 Arabidopsis thaliana HOM05D000886 ORTHO05D000525 1.1e-32 144.8 300 35.3
BcaB04g18681 Brassica carinata HOM05D000886 ORTHO05D000525 1.1e-32 144.8 297 38.4
Carub.0003s1179 Capsella rubella HOM05D000886 ORTHO05D000525 4.5e-31 139.4 300 40.3
CARHR086950 Cardamine hirsuta HOM05D000886 ORTHO05D000525 5.8e-31 139.0 304 35.9
C01p52780 Brassica napus HOM05D000886 ORTHO05D000525 2.9e-30 136.7 103 61.2
THA.LOC104821485 Tarenaya hassleriana HOM05D000886 ORTHO05D000525 1.4e-29 134.4 100 63.0
Thhalv10022181m.g Eutrema salsugineum HOM05D000886 ORTHO05D000525 6.0e-28 129.0 123 57.7
BraA03t12916Z Brassica rapa HOM05D002835 ORTHO05D003008 7.9e-28 128.6 302 32.8
Aa31LG4G16820 Aethionema arabicum HOM05D000886 ORTHO05D000525 2.1e-25 120.6 142 47.9
THA.LOC104821486 Tarenaya hassleriana HOM05D000886 ORTHO05D000525 2.1e-25 120.6 99 57.6
Thhalv10017696m.g Eutrema salsugineum HOM05D000886 ORTHO05D000525 8.1e-25 118.6 105 56.2
Aa31sc142G70 Aethionema arabicum HOM05D000886 ORTHO05D000525 3.1e-24 116.7 96 60.4
Carub.0004s1785 Capsella rubella HOM05D000886 ORTHO05D000525 3.1e-24 116.7 289 31.8
BolC1t05215H Brassica oleracea HOM05D000886 ORTHO05D000525 4.0e-24 116.3 95 56.8
Thhalv10028324m.g Eutrema salsugineum HOM05D000886 ORTHO05D000525 6.9e-24 115.5 74 71.6
TWI53G0058 Tripterygium wilfordii HOM05D000886 ORTHO05D000525 3.4e-23 113.2 291 29.6
Manes.03G206700 Manihot esculenta HOM05D000886 ORTHO05D000525 3.8e-22 109.8 101 50.5
Manes.15G001700 Manihot esculenta HOM05D000886 ORTHO05D000525 4.9e-22 109.4 100 49.0
AT2G36110 Arabidopsis thaliana HOM05D000886 ORTHO05D000525 6.5e-22 109.0 100 55.0
Carub.0004s1787 Capsella rubella HOM05D000886 ORTHO05D000525 1.1e-21 108.2 286 31.1
TWI53G0597 Tripterygium wilfordii HOM05D000886 ORTHO05D000525 1.1e-21 108.2 291 28.2
C03p45610 Brassica napus HOM05D002835 ORTHO05D003008 2.7e-20 103.6 291 33.3
AL4G32200 Arabidopsis lyrata HOM05D000886 ORTHO05D000525 1.1e-18 98.2 113 48.7
Lj6P693T55 Lonicera japonica HOM05D000886 ORTHO05D000525 1.5e-18 97.8 102 46.1
CARHR130350 Cardamine hirsuta HOM05D000886 ORTHO05D000525 9.6e-18 95.1 93 51.6
Hma1.2p1_0078F.1_g039890 Hydrangea macrophylla HOM05D000886 ORTHO05D000525 9.6e-18 95.1 104 47.1
BcaC09g48241 Brassica carinata HOM05D000886 ORTHO05D000525 2.8e-17 93.6 68 61.8
BolC3t16838H Brassica oleracea HOM05D002835 ORTHO05D003008 6.3e-17 92.4 64 65.6
BcaB04g21079 Brassica carinata HOM05D000886 ORTHO05D000525 1.1e-16 91.7 60 68.3
AL4G27870 Arabidopsis lyrata HOM05D000886 ORTHO05D000525 2.4e-16 90.5 100 49.0
Lj6P561T19 Lonicera japonica HOM05D000886 ORTHO05D000525 2.4e-16 90.5 97 47.4
Dinv15144 Davidia involucrata HOM05D015976 ORTHO05D019085 9.0e-16 88.6 131 42.0
Cfa020108 Carpinus fangiana HOM05D000886 ORTHO05D000525 5.9e-15 85.9 100 42.0
BolC1t05216H Brassica oleracea HOM05D000886 ORTHO05D000525 1.0e-14 85.1 60 63.3
VMungo0540G1700 Vigna mungo HOM05D000886 ORTHO05D000525 6.5e-14 82.4 307 26.7
Glyma.15G138600 Glycine max HOM05D000886 ORTHO05D000525 1.1e-13 81.6 101 43.6
PGR004G0208 Punica granatum HOM05D000886 ORTHO05D000525 2.5e-13 80.5 101 42.6
SGA_v2.0_scaffold66G22468 Striga asiatica HOM05D000886 ORTHO05D000525 7.2e-13 79.0 102 39.2
Aqoxy2G02689 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 9.3e-13 78.6 101 39.6
Cfa020109 Carpinus fangiana HOM05D000886 ORTHO05D000525 9.3e-13 78.6 100 40.0
Ca_00967_v3 Cicer arietinum L. HOM05D000886 ORTHO05D000525 1.2e-12 78.2 100 41.0
Aqoxy2G02688 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 2.1e-12 77.4 101 39.6
Gorai.005G068300 Gossypium raimondii HOM05D000886 ORTHO05D000525 2.7e-12 77.0 110 36.4
Gohir.D02G060600 Gossypium hirsutum HOM05D000886 ORTHO05D000525 3.5e-12 76.6 102 36.3
Gohir.A02G055600 Gossypium hirsutum HOM05D000886 ORTHO05D000525 4.6e-12 76.3 102 36.3
PSO017G2955 Papaver somniferum HOM05D000886 ORTHO05D000525 4.6e-12 76.3 100 38.0
TAR362G0877 Trochodendron aralioides HOM05D000886 ORTHO05D000525 4.6e-12 76.3 104 40.4
AUR62039256 Chenopodium quinoa HOM05D000886 ORTHO05D000525 1.8e-11 74.3 104 35.6
Psat1g162320 Pisum sativum HOM05D000886 ORTHO05D000525 6.7e-11 72.4 103 40.8
Nn4g25542 Nelumbo nucifera HOM05D000886 ORTHO05D000525 8.7e-11 72.0 102 38.2
MBI18_g35538_MAGBIO Magnolia biondii HOM05D000886 ORTHO05D000525 1.5e-10 71.2 101 36.6
PSO210G3345 Papaver somniferum HOM05D000886 ORTHO05D000525 2.5e-10 70.5 100 36.0
SalBow6G7074 Salvia bowleyana HOM05D000886 ORTHO05D000525 9.7e-10 68.6 99 38.4
Sp4g18350 Schrenkiella parvula HOM05D000886 ORTHO05D000525 9.7e-10 68.6 63 57.1
DCAR_030457 Daucus carota HOM05D000886 ORTHO05D000525 3.7e-09 66.6 94 38.3
arahy.Tifrunner.gnm1.ann1.5T13S1 Arachis hypogaea HOM05D000886 ORTHO05D000525 2.4e-08 63.9 103 35.0
Phvul.006G119400 Phaseolus vulgaris HOM05D000886 ORTHO05D000525 3.1e-08 63.5 104 36.5
PSO302G0060 Papaver somniferum HOM05D000886 ORTHO05D000525 6.9e-08 62.4 101 34.7
Rhsim04G0240900 Rhododendron simsii HOM05D000886 ORTHO05D000525 9.0e-08 62.0 104 34.6
Cpa.g.sc9.30 Carica papaya HOM05D000886 ORTHO05D000525 1.5e-07 61.2 81 38.3
Glyma.09G033900 Glycine max HOM05D000886 ORTHO05D000525 3.4e-07 60.1 123 36.6
AL3G24090 Arabidopsis lyrata HOM05D000886 ORTHO05D000525 7.7e-07 58.9 58 50.0
Ah.07g201460 Amaranthus hybridus HOM05D000886 ORTHO05D000525 6.5e-06 55.8 81 35.8
Phvul.006G119600 Phaseolus vulgaris HOM05D000886 ORTHO05D000525 8.5e-06 55.5 103 33.0


User provided reference genes

Program Settings