Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G20150 Arabidopsis lyrata HOM05D007125 ORTHO05D008766 0.0e+00 2162.1 1108 100.0
AT3G09080 Arabidopsis thaliana HOM05D007125 ORTHO05D008766 0.0e+00 1902.1 1109 89.8
Carub.0003s0824 Capsella rubella HOM05D007125 ORTHO05D008766 0.0e+00 1810.0 1109 84.6
BcaC09g48007 Brassica carinata HOM05D007125 ORTHO05D008766 0.0e+00 1698.7 1103 79.8
BraA01t04316Z Brassica rapa HOM05D007125 ORTHO05D008766 0.0e+00 1691.4 1103 79.3
BolC1t05475H Brassica oleracea HOM05D007125 ORTHO05D008766 0.0e+00 1681.8 1115 78.4
Sp3g07530 Schrenkiella parvula HOM05D007125 ORTHO05D008766 0.0e+00 1573.5 1013 80.7
CARHR083450 Cardamine hirsuta HOM05D007125 ORTHO05D008766 0.0e+00 1532.7 946 83.4
Thhalv10022253m.g Eutrema salsugineum HOM05D007125 ORTHO05D008766 0.0e+00 1446.0 1107 72.2
Aa31LG3G1610 Aethionema arabicum HOM05D007125 ORTHO05D008766 0.0e+00 1348.6 1112 66.5
THA.LOC104823281 Tarenaya hassleriana HOM05D007125 ORTHO05D008766 0.0e+00 1262.3 1137 61.7
Haze_20950 Corylus avellana HOM05D007125 ORTHO05D008766 2.7e-275 952.6 1213 46.7
Duzib093G0828 Durio zibethinus HOM05D007125 ORTHO05D008766 5.4e-268 928.3 1223 45.6
Cpa.g.sc56.115 Carica papaya HOM05D007125 ORTHO05D008766 7.8e-267 924.5 830 58.4
Thecc.05G022200 Theobroma cacao HOM05D007125 ORTHO05D008766 1.4e-263 913.7 1187 46.2
Potri.006G096400 Populus trichocarpa HOM05D007125 ORTHO05D008766 2.4e-263 912.9 1234 44.6
CiPaw.09G206100 Carya illinoinensis HOM05D007125 ORTHO05D008766 2.1e-259 899.8 1220 46.6
COL.COLO4_14596 Corchorus olitorius HOM05D007125 ORTHO05D008766 2.4e-255 886.3 1176 46.0
TWI77G0961 Tripterygium wilfordii HOM05D007125 ORTHO05D008766 3.4e-254 882.5 1188 44.9
Sabra06G0074100 Salix brachista HOM05D007125 ORTHO05D008766 1.4e-252 877.1 1223 43.3
Ciclev10013588m.g Citrus clementina HOM05D007125 ORTHO05D008766 6.7e-250 868.2 927 51.5
Dinv35513 Davidia involucrata HOM05D007125 ORTHO05D008766 3.8e-237 825.9 1243 42.0
Actinidia29131 Actinidia chinensis HOM05D007125 ORTHO05D008766 1.1e-236 824.3 1216 42.8
CANSAT35G1716 Cannabis sativa HOM05D007125 ORTHO05D008766 3.3e-233 812.8 923 49.5
CsaV3_4G025990 Cucumis sativus L. HOM05D007125 ORTHO05D008766 2.2e-232 810.1 1230 42.2
GSVIVG01034011001 Vitis vinifera HOM05D007125 ORTHO05D008766 2.2e-232 810.1 926 50.1
TAR623G0133 Trochodendron aralioides HOM05D007125 ORTHO05D008766 4.8e-232 808.9 1268 41.0
Sed0001650 Sechium edule HOM05D007125 ORTHO05D008766 4.5e-230 802.4 1089 43.9
Aqoxy1G00714 Aquilegia oxysepala HOM05D007125 ORTHO05D008766 3.2e-228 796.2 951 48.2
vmacro20236 Vaccinium macrocarpon HOM05D007125 ORTHO05D008766 1.2e-227 794.3 863 51.3
PGR031G2086 Punica granatum HOM05D007125 ORTHO05D008766 2.8e-224 783.1 1208 41.3
Nn2g11366 Nelumbo nucifera HOM05D007125 ORTHO05D008766 3.1e-223 779.6 1201 40.9
ClCG04G007250 Citrullus lanatus HOM05D007125 ORTHO05D008766 1.2e-222 777.7 1225 40.9
Lj2A79T37 Lonicera japonica HOM05D007125 ORTHO05D008766 1.3e-221 774.2 1227 40.5
Hma1.2p1_0763F.1_g214640 Hydrangea macrophylla HOM05D007125 ORTHO05D008766 2.4e-215 753.4 920 47.1
Phvul.008G107900 Phaseolus vulgaris HOM05D007125 ORTHO05D008766 3.8e-213 746.1 1188 40.2
arahy.Tifrunner.gnm1.ann1.8EY2MC Arachis hypogaea HOM05D007125 ORTHO05D008766 1.9e-212 743.8 1216 40.2
MBI05_g03452_MAGBIO Magnolia biondii HOM05D007125 ORTHO05D008766 1.2e-211 741.1 822 50.0
Lj1g0008640 Lotus japonicus HOM05D007125 ORTHO05D008766 3.0e-210 736.5 924 46.9
arahy.Tifrunner.gnm1.ann1.A1GI61 Arachis hypogaea HOM05D007125 ORTHO05D008766 9.7e-209 731.5 1195 40.3
PSO384G0252 Papaver somniferum HOM05D007125 ORTHO05D008766 1.1e-207 728.0 817 48.3
Glyma.07G144800 Glycine max HOM05D007125 ORTHO05D008766 2.2e-205 720.3 868 46.8
DCAR_024035 Daucus carota HOM05D007125 ORTHO05D008766 3.1e-199 699.9 1272 37.3
Lsat_1_v5_gn_8_99881 Lactuca sativa HOM05D007125 ORTHO05D008766 4.5e-198 696.0 1105 40.5
ATR0618G048 Amborella trichopoda HOM05D007125 ORTHO05D008766 2.3e-197 693.7 939 43.0
TPR.G1550 Trifolium pratense HOM05D007125 ORTHO05D008766 8.6e-197 691.8 722 52.2
Ca_09172_v3 Cicer arietinum L. HOM05D007125 ORTHO05D008766 1.9e-196 690.6 1219 37.0
Sopen09g007020 Solanum pennellii HOM05D007125 ORTHO05D008766 3.6e-195 686.4 816 47.4
Nitab4.5_0009193g0010 Nicotiana tabacum HOM05D007125 ORTHO05D008766 8.0e-195 685.3 872 45.2
Nitab4.5_0000008g0740 Nicotiana tabacum HOM05D007125 ORTHO05D008766 6.8e-194 682.2 871 45.2
Solyc09g013160.3 Solanum lycopersicum HOM05D007125 ORTHO05D008766 1.5e-193 681.0 816 47.4
Migut.J00225 Erythranthe guttata HOM05D007125 ORTHO05D008766 1.8e-191 674.1 1215 37.6
Psat3g131480 Pisum sativum HOM05D007125 ORTHO05D008766 2.4e-191 673.7 1191 38.0
Gohir.D09G158900 Gossypium hirsutum HOM05D007125 ORTHO05D008766 5.4e-191 672.5 974 43.0
MELO3C003224.2 Cucumis melo HOM05D007125 ORTHO05D008766 1.8e-186 657.5 1233 37.5
Gorai.006G180600 Gossypium raimondii HOM05D007125 ORTHO05D008766 7.5e-185 652.1 974 42.4
Oeu044362.1 Olea europaea HOM05D007125 ORTHO05D008766 4.6e-182 642.9 1180 35.9
SalBow5G1282 Salvia bowleyana HOM05D007125 ORTHO05D008766 2.3e-181 640.6 1148 37.2
Lalb_Chr03g0042991 Lupinus albus HOM05D007125 ORTHO05D008766 1.3e-173 614.8 803 44.8
VMungo1383G2599 Vigna mungo HOM05D007125 ORTHO05D008766 1.9e-172 610.9 1083 38.8
ECA236G2625 Erigeron canadensis HOM05D007125 ORTHO05D008766 3.4e-169 600.1 930 38.8
Manes.08G087700 Manihot esculenta HOM05D007125 ORTHO05D008766 3.3e-164 583.6 967 39.4
HanXRQChr04g0102021 Helianthus annuus HOM05D007125 ORTHO05D008766 1.4e-159 568.2 647 47.1
CDE04G1007 Ceratophyllum demersum HOM05D007125 ORTHO05D008766 4.4e-153 546.6 840 40.6
Mapoly0113s0048 Marchantia polymorpha HOM05D007125 ORTHO05D008766 9.0e-146 522.3 875 37.6
Pp3c9_8840 Physcomitrium patens HOM05D007125 ORTHO05D008766 2.6e-145 520.8 977 34.9
SMO358G0023 Selaginella moellendorffii HOM05D007125 ORTHO05D008766 1.0e-141 508.8 954 35.5
Gohir.A09G163400 Gossypium hirsutum HOM05D007125 ORTHO05D008766 1.9e-140 504.6 760 41.1
Atru.chr8.2198 Acer truncatum HOM05D007125 ORTHO05D008766 2.1e-139 501.1 832 40.0
AagrBONN_evm.TU.Sc2ySwM_228.1352 Anthoceros agrestis HOM05D007125 ORTHO05D008766 6.9e-138 496.1 981 35.0
MSTRG.19028 Avicennia marina HOM05D007125 ORTHO05D008766 5.3e-130 469.9 664 41.6
Pp3c3_16960 Physcomitrium patens HOM05D007125 ORTHO05D008766 2.9e-128 464.2 1062 32.0
Sc01g0006770 Simmondsia chinensis HOM05D007125 ORTHO05D008766 6.5e-128 463.0 511 49.5
Medtr7g066770 Medicago truncatula HOM05D007125 ORTHO05D008766 2.2e-123 448.0 461 51.0
PGSC0003DMG400020348 Solanum tuberosum HOM05D007125 ORTHO05D008766 2.8e-115 421.0 490 46.5
CSS0003995 Camellia sinensis var. sinensis HOM05D007125 ORTHO05D008766 1.0e-93 349.4 475 44.8
CARHR083440 Cardamine hirsuta HOM05D007125 ORTHO05D008766 5.8e-68 263.8 166 84.3
SEGI_28201 Sequoiadendron giganteum HOM05D007125 ORTHO05D008766 4.1e-66 257.7 388 42.0
Cre01.g034600 Chlamydomonas reinhardtii HOM05D007125 ORTHO05D008766 4.4e-60 237.7 747 28.0
MCO08G172 Micromonas commoda HOM05D007125 ORTHO05D008766 1.9e-58 232.3 888 26.1
Atru.chr8.2197 Acer truncatum HOM05D007125 ORTHO05D008766 1.7e-56 225.7 193 60.1
BolC1t05511H Brassica oleracea HOM05D007125 ORTHO05D008766 1.5e-52 212.6 184 66.3
Medtr7g066750 Medicago truncatula HOM05D007125 ORTHO05D008766 2.7e-49 201.8 593 28.3
arahy.Tifrunner.gnm1.ann1.IUS8SN Arachis hypogaea HOM05D007125 ORTHO05D008766 9.9e-44 183.3 251 41.4
arahy.Tifrunner.gnm1.ann1.KE62B1 Arachis hypogaea HOM05D007125 ORTHO05D008766 2.2e-43 182.2 251 41.0
HanXRQChr04g0102011 Helianthus annuus HOM05D007125 ORTHO05D008766 1.1e-42 179.9 294 37.1
arahy.Tifrunner.gnm1.ann1.KIE2XR Arachis hypogaea HOM05D007125 ORTHO05D008766 2.4e-42 178.7 251 40.6
Sc01g0006790 Simmondsia chinensis HOM05D007125 ORTHO05D008766 3.9e-32 144.8 260 37.7
unitig_27.g24821 Utricularia gibba HOM05D007125 ORTHO05D008766 1.1e-26 126.7 570 23.3
MSTRG.19029 Avicennia marina HOM05D007125 ORTHO05D008766 8.7e-24 117.1 101 57.4
Lalb_Chr03g0042981 Lupinus albus HOM05D007125 ORTHO05D008766 1.1e-23 116.7 89 66.3
VMungo1383G1324 Vigna mungo HOM05D007125 ORTHO05D008766 1.5e-23 116.3 88 65.9
BcaC09g47967 Brassica carinata HOM05D007125 ORTHO05D008766 5.6e-23 114.4 71 83.1
Actinidia13779 Actinidia chinensis HOM05D007125 ORTHO05D008766 2.1e-22 112.5 88 68.2
CSS0006466 Camellia sinensis var. sinensis HOM05D007125 ORTHO05D008766 2.8e-22 112.1 90 68.9
Sc01g0006780 Simmondsia chinensis HOM05D007125 ORTHO05D008766 7.9e-17 94.0 114 46.5
unitig_27.g24820 Utricularia gibba HOM05D007125 ORTHO05D008766 1.9e-10 72.8 77 50.6
Cfa025266 Carpinus fangiana HOM05D007125 ORTHO05D008766 5.5e-10 71.2 137 33.6
PRCOL_00005200 Prasinoderma coloniale HOM05D009332 ORTHO05D011893 7.1e-10 70.9 474 23.2
MBI11_g31733_MAGBIO Magnolia biondii HOM05D007125 ORTHO05D008766 1.2e-09 70.1 76 43.4
MBI05_g03454_MAGBIO Magnolia biondii HOM05D007125 ORTHO05D008766 9.7e-07 60.5 199 27.1
TPR.G1592 Trifolium pratense HOM05D007125 ORTHO05D008766 9.7e-07 60.5 119 30.3
SalBow2G1504 Salvia bowleyana HOM05D005544 ORTHO05D007303 2.8e-06 58.9 256 25.4


User provided reference genes

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