Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G15170 Arabidopsis lyrata HOM05D005899 ORTHO05D007445 4.2e-130 468.0 231 100.0
AT3G04880 Arabidopsis thaliana HOM05D005899 ORTHO05D007445 1.5e-124 449.5 231 95.7
CARHR079150 Cardamine hirsuta HOM05D005899 ORTHO05D007445 5.1e-120 434.5 229 93.0
Sp3g03700 Schrenkiella parvula HOM05D005899 ORTHO05D007445 2.2e-118 429.1 230 91.3
Aa31LG5G15270 Aethionema arabicum HOM05D005899 ORTHO05D007445 5.9e-116 421.0 227 90.3
BraA05t22981Z Brassica rapa HOM05D005899 ORTHO05D007445 1.4e-114 416.4 230 89.1
C05p62440 Brassica napus HOM05D005899 ORTHO05D007445 4.2e-114 414.8 230 88.7
A05p42720 Brassica napus HOM05D005899 ORTHO05D007445 5.5e-114 414.5 230 88.3
BolC5t34897H Brassica oleracea HOM05D005899 ORTHO05D007445 4.7e-113 411.4 230 88.3
BcaB03g11648 Brassica carinata HOM05D005899 ORTHO05D007445 1.4e-109 399.8 230 83.9
THA.LOC104802822 Tarenaya hassleriana HOM05D005899 ORTHO05D007445 1.0e-107 393.7 231 81.0
Cfa006459 Carpinus fangiana HOM05D005899 ORTHO05D007445 6.7e-96 354.4 229 72.1
Manes.09G155900 Manihot esculenta HOM05D005899 ORTHO05D007445 8.8e-96 354.0 230 73.0
CiPaw.07G006200 Carya illinoinensis HOM05D005899 ORTHO05D007445 3.3e-95 352.1 229 72.1
QL03p024530 Quercus lobata HOM05D005899 ORTHO05D007445 7.5e-95 350.9 229 72.5
MD12G1237200 Malus domestica HOM05D005899 ORTHO05D007445 6.3e-94 347.8 229 71.2
RcHm_v2.0_Chr3g0451931 Rosa chinensis HOM05D005899 ORTHO05D007445 6.3e-94 347.8 228 71.9
Cpa.g.sc117.66 Carica papaya HOM05D005899 ORTHO05D007445 5.3e-93 344.7 229 71.2
FvH4_6g03430 Fragaria vesca HOM05D005899 ORTHO05D007445 7.0e-93 344.4 229 70.7
Ciclev10001941m.g Citrus clementina HOM05D005899 ORTHO05D007445 1.2e-92 343.6 229 69.9
TAR362G0589 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.6e-92 343.2 229 69.9
Eucgr.L01763 Eucalyptus grandis HOM05D005899 ORTHO05D007445 2.0e-92 342.8 230 70.9
arahy.Tifrunner.gnm1.ann1.41KAT0 Arachis hypogaea HOM05D005899 ORTHO05D007445 2.7e-92 342.4 229 69.9
Gorai.007G285000 Gossypium raimondii HOM05D005899 ORTHO05D007445 7.7e-92 340.9 229 69.9
CSS0047717 Camellia sinensis var. sinensis HOM05D005899 ORTHO05D007445 2.2e-91 339.3 230 71.3
Potri.005G050600 Populus trichocarpa HOM05D005899 ORTHO05D007445 2.2e-91 339.3 230 69.1
DCAR_006615 Daucus carota HOM05D005899 ORTHO05D007445 2.9e-91 339.0 231 72.7
Ciclev10001942m.g Citrus clementina HOM05D005899 ORTHO05D007445 5.0e-91 338.2 229 68.1
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 5.0e-91 338.2 230 71.7
Medtr7g114750 Medicago truncatula HOM05D005899 ORTHO05D007445 5.0e-91 338.2 229 70.3
FAN14G1139 Fragaria x ananassa HOM05D005899 ORTHO05D007445 6.5e-91 337.8 229 69.0
Gohir.A11G255200 Gossypium hirsutum HOM05D005899 ORTHO05D007445 1.1e-90 337.0 229 69.0
Thecc.05G288500 Theobroma cacao HOM05D005899 ORTHO05D007445 1.1e-90 337.0 229 69.9
MBI01_g13083_MAGBIO Magnolia biondii HOM05D005899 ORTHO05D007445 1.5e-90 336.7 230 69.1
Actinidia05763 Actinidia chinensis HOM05D005899 ORTHO05D007445 1.9e-90 336.3 229 69.0
CANSAT54G2589 Cannabis sativa HOM05D005899 ORTHO05D007445 2.5e-90 335.9 230 69.6
VMungo0540G1799 Vigna mungo HOM05D005899 ORTHO05D007445 2.5e-90 335.9 229 69.0
FAN02G1821 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.2e-90 335.5 226 69.5
Gohir.D11G264900 Gossypium hirsutum HOM05D005899 ORTHO05D007445 3.2e-90 335.5 229 69.0
Glyma.19G243000 Glycine max HOM05D005899 ORTHO05D007445 4.2e-90 335.1 229 68.6
TWI56G0091 Tripterygium wilfordii HOM05D005899 ORTHO05D007445 4.2e-90 335.1 232 69.0
EL10Ac4g09173 Beta vulgaris HOM05D005899 ORTHO05D007445 9.4e-90 334.0 230 68.7
Prupe.6G339900 Prunus persica HOM05D005899 ORTHO05D007445 9.4e-90 334.0 229 68.1
PSO761G0524 Papaver somniferum HOM05D005899 ORTHO05D007445 1.2e-89 333.6 229 68.1
Duzib128G1862 Durio zibethinus HOM05D005899 ORTHO05D007445 1.6e-89 333.2 229 69.4
Duzib177G0382 Durio zibethinus HOM05D005899 ORTHO05D007445 1.6e-89 333.2 229 69.9
TPR.G6971 Trifolium pratense HOM05D005899 ORTHO05D007445 1.6e-89 333.2 229 69.0
Lalb_Chr15g0076871 Lupinus albus HOM05D005899 ORTHO05D007445 2.1e-89 332.8 229 66.4
PGR083G2155 Punica granatum HOM05D005899 ORTHO05D007445 2.7e-89 332.4 228 70.6
Sabra15G0068500 Salix brachista HOM05D005899 ORTHO05D007445 8.0e-89 330.9 230 68.3
Phvul.006G099800 Phaseolus vulgaris HOM05D005899 ORTHO05D007445 1.8e-88 329.7 229 68.6
Psat0s62g0080 Pisum sativum HOM05D005899 ORTHO05D007445 2.3e-88 329.3 229 68.1
Ca_09408_v3 Cicer arietinum L. HOM05D005899 ORTHO05D007445 4.0e-88 328.6 229 69.0
Sed0018425 Sechium edule HOM05D005899 ORTHO05D007445 4.0e-88 328.6 229 67.7
Lj1g0012490 Lotus japonicus HOM05D005899 ORTHO05D007445 5.2e-88 328.2 229 67.2
Rhsim07G0131800 Rhododendron simsii HOM05D005899 ORTHO05D007445 1.5e-87 326.6 235 68.5
CDE05G2514 Ceratophyllum demersum HOM05D005899 ORTHO05D007445 4.4e-87 325.1 230 66.1
SGA_v2.0_scaffold517G52669 Striga asiatica HOM05D005899 ORTHO05D007445 4.4e-87 325.1 230 69.1
Migut.N00303 Erythranthe guttata HOM05D005899 ORTHO05D007445 5.7e-87 324.7 230 70.9
Oeu064565.1 Olea europaea HOM05D005899 ORTHO05D007445 7.5e-87 324.3 232 69.0
vmacro14199 Vaccinium macrocarpon HOM05D005899 ORTHO05D007445 7.5e-87 324.3 239 66.9
AUR62000983 Chenopodium quinoa HOM05D005899 ORTHO05D007445 1.3e-86 323.6 229 66.4
Lj7P487T33 Lonicera japonica HOM05D005899 ORTHO05D007445 1.3e-86 323.6 229 68.1
ATR0681G168 Amborella trichopoda HOM05D005899 ORTHO05D007445 8.3e-86 320.9 226 67.7
HPP92_023141 Vanilla planifolia HOM05D005899 ORTHO05D007445 1.1e-85 320.5 227 67.8
ECA233G4289 Erigeron canadensis HOM05D005899 ORTHO05D007445 3.5e-84 315.5 232 66.4
Solyc01g097800.3 Solanum lycopersicum HOM05D005899 ORTHO05D007445 3.8e-83 312.0 229 65.5
PGSC0003DMG400022509 Solanum tuberosum HOM05D005899 ORTHO05D007445 3.8e-83 312.0 229 65.1
Cc02_g31760 Coffea canephora HOM05D005899 ORTHO05D007445 5.0e-83 311.6 233 65.7
Zm00001eb162780 Zea mays HOM05D005899 ORTHO05D007445 5.0e-83 311.6 229 65.5
SHI18352 Sapria himalayana HOM05D005899 ORTHO05D007445 6.5e-83 311.2 230 65.7
Os01g0542000 Oryza sativa ssp. japonica HOM05D005899 ORTHO05D007445 1.5e-82 310.1 229 64.2
Sopen01g041400 Solanum pennellii HOM05D005899 ORTHO05D007445 3.3e-82 308.9 229 65.1
HanXRQChr02g0057281 Helianthus annuus HOM05D005899 ORTHO05D007445 5.5e-82 308.1 229 64.2
Lsat_1_v5_gn_6_53000 Lactuca sativa HOM05D005899 ORTHO05D007445 5.5e-82 308.1 229 65.9
FAN05G2237 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.6e-81 306.6 229 65.1
Nitab4.5_0002361g0040 Nicotiana tabacum HOM05D005899 ORTHO05D007445 1.0e-80 303.9 229 63.3
Oeu044665.1 Olea europaea HOM05D005899 ORTHO05D007445 1.4e-80 303.5 233 64.8
Sc13g0006240 Simmondsia chinensis HOM05D005899 ORTHO05D007445 1.4e-80 303.5 229 64.2
TPR.G8897 Trifolium pratense HOM05D005899 ORTHO05D007445 3.0e-80 302.4 223 65.0
QL03p024564 Quercus lobata HOM05D005899 ORTHO05D007445 1.7e-78 296.6 229 65.5
Cfa006460 Carpinus fangiana HOM05D005899 ORTHO05D007445 7.0e-77 291.2 226 64.2
SEGI_33796 Sequoiadendron giganteum HOM05D005899 ORTHO05D007445 1.2e-76 290.4 227 60.4
Eucgr.L02099 Eucalyptus grandis HOM05D005899 ORTHO05D007445 6.1e-73 278.1 205 65.9
SMO367G0143 Selaginella moellendorffii HOM05D005899 ORTHO05D007445 6.1e-73 278.1 229 58.5
Carub.0003s0407 Capsella rubella HOM05D005899 ORTHO05D007445 8.0e-73 277.7 148 89.2
Peaxi162Scf00404g00009 Petunia axillaris HOM05D005899 ORTHO05D007445 2.0e-71 273.1 196 65.8
Ah.04g162380 Amaranthus hybridus HOM05D005899 ORTHO05D007445 2.5e-66 256.1 171 69.0
Nn4g26305 Nelumbo nucifera HOM05D005899 ORTHO05D007445 7.3e-66 254.6 169 71.6
Pp3c6_4500 Physcomitrium patens HOM05D005899 ORTHO05D007445 2.8e-65 252.7 337 42.4
Haze_04330 Corylus avellana HOM05D005899 ORTHO05D007445 8.0e-65 251.1 229 53.7
Sabra15G0041400 Salix brachista HOM05D005899 ORTHO05D007445 8.0e-65 251.1 230 55.7
CAN.G134.162 Capsicum annuum HOM05D005899 ORTHO05D007445 5.2e-64 248.4 235 57.9
Nitab4.5_0013433g0050 Nicotiana tabacum HOM05D005899 ORTHO05D007445 8.9e-64 247.7 193 61.7
Eucgr.L02186 Eucalyptus grandis HOM05D005899 ORTHO05D007445 9.8e-63 244.2 228 51.8
Eucgr.B01712 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.3e-59 233.8 228 53.1
Atru.chr2.732 Acer truncatum HOM05D005899 ORTHO05D007445 8.6e-59 231.1 166 66.9
Atru.chr2.745 Acer truncatum HOM05D005899 ORTHO05D007445 1.1e-58 230.7 164 67.7
FAN09G0887 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.1e-53 214.2 229 49.3
Dinv12477 Davidia involucrata HOM05D005899 ORTHO05D007445 2.7e-52 209.5 134 75.4
Sabra15G0056900 Salix brachista HOM05D005899 ORTHO05D007445 5.1e-51 205.3 139 67.6
Sabra15G0057000 Salix brachista HOM05D005899 ORTHO05D007445 5.1e-51 205.3 139 67.6
Sabra15G0068600 Salix brachista HOM05D005899 ORTHO05D007445 5.1e-51 205.3 139 67.6
AUR62004985 Chenopodium quinoa HOM05D005899 ORTHO05D007445 4.0e-48 195.7 229 48.0
Atru.chr2.742 Acer truncatum HOM05D005899 ORTHO05D007445 4.4e-47 192.2 162 60.5
Eucgr.B01710 Eucalyptus grandis HOM05D005899 ORTHO05D007445 2.2e-46 189.9 228 46.5
FAN05G4786 Fragaria x ananassa HOM05D005899 ORTHO05D007445 2.9e-46 189.5 102 83.3
SGA_v2.0_scaffold31G12627 Striga asiatica HOM05D005899 ORTHO05D007445 4.3e-42 175.6 127 63.0
Actinidia36917 Actinidia chinensis HOM05D005899 ORTHO05D007445 1.8e-40 170.2 133 60.9
Cfa006462 Carpinus fangiana HOM05D005899 ORTHO05D007445 1.8e-40 170.2 134 61.2
BcaNung06538 Brassica carinata HOM05D005899 ORTHO05D007445 1.2e-39 167.5 90 91.1
unitig_744.g24569 Utricularia gibba HOM05D005899 ORTHO05D007445 9.6e-26 121.3 115 54.8
Medtr8g098320 Medicago truncatula HOM05D005899 ORTHO05D007445 1.3e-25 120.9 109 56.9
AUR62004976 Chenopodium quinoa HOM05D005899 ORTHO05D007445 4.0e-24 115.9 88 60.2
TAR140G0002 Trochodendron aralioides HOM05D005899 ORTHO05D007445 5.3e-24 115.5 109 58.7
TAR623G1042 Trochodendron aralioides HOM05D005899 ORTHO05D007445 5.3e-24 115.5 109 58.7
Medtr7g114730 Medicago truncatula HOM05D005899 ORTHO05D007445 2.6e-23 113.2 90 61.1
TAR375G0990 Trochodendron aralioides HOM05D005899 ORTHO05D007445 3.8e-22 109.4 110 57.3
TAR636G1090 Trochodendron aralioides HOM05D005899 ORTHO05D007445 8.4e-22 108.2 109 56.0
unitig_21.g20175 Utricularia gibba HOM05D005899 ORTHO05D007445 1.1e-18 97.8 86 57.0
TAR625G0400 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.5e-18 97.4 94 56.4
RcHm_v2.0_Chr7g0217791 Rosa chinensis HOM05D005899 ORTHO05D007445 1.0e-14 84.7 129 40.3
TAR375G0306 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.9e-10 70.5 53 69.8
PRCOL_00001982 Prasinoderma coloniale HOM05D005899 ORTHO05D007445 9.7e-10 68.2 79 45.6
TAR365G0745 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.2e-09 67.0 61 62.3
TPR.G21843 Trifolium pratense HOM05D005899 ORTHO05D007445 3.7e-09 66.2 45 73.3
FvH4_7g17710 Fragaria vesca HOM05D005899 ORTHO05D045384 3.1e-08 63.2 58 51.7
FAN05G4109 Fragaria x ananassa HOM05D005899 ORTHO05D007445 2.0e-07 60.5 89 40.4
FAN06G4129 Fragaria x ananassa HOM05D005899 ORTHO05D045384 2.0e-07 60.5 57 50.9
Carub.0003s0408 Capsella rubella HOM05D005899 ORTHO05D007445 2.2e-06 57.0 27 100.0


User provided reference genes

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