Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G32650 Arabidopsis lyrata HOM05D046374 ORTHO05D031393 1.9e-53 212.2 107 100.0
AL3G12190 Arabidopsis lyrata HOM05D003800 ORTHO05D004549 1.1e-21 106.7 74 78.4
AT3G02780 Arabidopsis thaliana HOM05D003800 ORTHO05D004549 1.1e-21 106.7 75 80.0
Carub.0003s0188 Capsella rubella HOM05D003800 ORTHO05D004549 6.9e-19 97.4 77 71.4
AL4G15920 Arabidopsis lyrata HOM05D046374 ORTHO05D031393 2.9e-17 92.0 42 100.0
Thhalv10020933m.g Eutrema salsugineum HOM05D003800 ORTHO05D004549 2.1e-12 75.9 82 58.5
Sp3g01810 Schrenkiella parvula HOM05D003800 ORTHO05D004549 1.1e-11 73.6 81 58.0
CARHR076790 Cardamine hirsuta HOM05D003800 ORTHO05D004549 2.6e-10 68.9 81 56.8
A03p33110 Brassica napus HOM05D003800 ORTHO05D004549 2.2e-09 65.9 75 58.7
BraA03t12481Z Brassica rapa HOM05D003800 ORTHO05D004549 4.9e-09 64.7 74 58.1
A05p44340 Brassica napus HOM05D003800 ORTHO05D004549 6.0e-07 57.8 77 57.1
C05p21360 Brassica napus HOM05D003800 ORTHO05D031393 6.0e-07 57.8 62 54.8
BraA06t23290Z Brassica rapa HOM05D003800 ORTHO05D004549 6.0e-07 57.8 77 57.1
Aa31LG5G13250 Aethionema arabicum HOM05D003800 ORTHO05D004549 7.9e-07 57.4 64 53.1
BcaC05g30508 Brassica carinata HOM05D003800 ORTHO05D004549 1.8e-06 56.2 80 50.0
BcaC05g30511 Brassica carinata HOM05D003800 ORTHO05D004549 1.8e-06 56.2 74 54.1
AL6G27370 Arabidopsis lyrata HOM05D003800 ORTHO05D004549 3.9e-06 55.1 78 51.3
C03p40290 Brassica napus HOM05D003800 ORTHO05D004549 3.9e-06 55.1 78 47.4
BolC3t16294H Brassica oleracea HOM05D003800 ORTHO05D004549 3.9e-06 55.1 78 47.4
BcaNung04309 Brassica carinata HOM05D003800 ORTHO05D004549 5.1e-06 54.7 63 57.1
BolC1t05871H Brassica oleracea HOM05D003800 ORTHO05D004549 5.1e-06 54.7 63 57.1
C09p75900 Brassica napus HOM05D003800 ORTHO05D004549 8.7e-06 53.9 74 52.7
BolC5t35067H Brassica oleracea HOM05D003800 ORTHO05D004549 8.7e-06 53.9 74 52.7


User provided reference genes

Program Settings