Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G21560 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 3.5e-94 348.2 167 100.0
BcaC03g16543 Brassica carinata HOM05D006976 ORTHO05D008761 2.4e-82 308.9 230 71.7
C09p40240 Brassica napus HOM05D006976 ORTHO05D008761 2.4e-82 308.9 230 71.7
BolSC35t60749H Brassica oleracea HOM05D006976 ORTHO05D008761 2.4e-82 308.9 230 71.7
BolSC46t61034H Brassica oleracea HOM05D006976 ORTHO05D008761 2.4e-82 308.9 230 71.7
BraSC25t45865Z Brassica rapa HOM05D006976 ORTHO05D008761 2.4e-82 308.9 230 71.7
Thhalv10010976m.g Eutrema salsugineum HOM05D006976 ORTHO05D008761 2.6e-81 305.4 230 71.3
CARHR282110 Cardamine hirsuta HOM05D006976 ORTHO05D008761 9.9e-81 303.5 230 70.4
ATCG00530 Arabidopsis thaliana HOM05D006976 ORTHO05D008761 1.7e-80 302.8 230 70.4
BraA06t25422Z Brassica rapa HOM05D006976 ORTHO05D008761 6.4e-80 300.8 231 70.6
A06p23180 Brassica napus HOM05D006976 ORTHO05D008761 5.1e-77 291.2 221 70.6
BolC9t56930H Brassica oleracea HOM05D006976 ORTHO05D008761 5.1e-77 291.2 228 69.3
BolSC47t61096H Brassica oleracea HOM05D006976 ORTHO05D008761 2.0e-73 279.3 229 66.4
C02p43530 Brassica napus HOM05D006976 ORTHO05D008761 2.1e-70 269.2 230 64.8
AL2G20664 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 1.1e-68 263.5 230 64.3
PGR111G0047 Punica granatum HOM05D006976 ORTHO05D008761 2.1e-59 232.6 189 63.5
Eucgr.E01114 Eucalyptus grandis HOM05D006976 ORTHO05D008761 3.7e-59 231.9 191 63.4
Eucgr.E02607 Eucalyptus grandis HOM05D006976 ORTHO05D008761 3.7e-59 231.9 191 63.4
HanXRQChr01g0020351 Helianthus annuus HOM05D006976 ORTHO05D008761 4.8e-59 231.5 191 62.3
HanXRQChr10g0283561 Helianthus annuus HOM05D006976 ORTHO05D008761 4.8e-59 231.5 191 62.3
HanXRQChr10g0284251 Helianthus annuus HOM05D006976 ORTHO05D008761 4.8e-59 231.5 191 62.3
HanXRQChr10g0289271 Helianthus annuus HOM05D006976 ORTHO05D008761 4.8e-59 231.5 191 62.3
HanXRQChr10g0318191 Helianthus annuus HOM05D006976 ORTHO05D008761 4.8e-59 231.5 191 62.3
HanXRQChr11g0326831 Helianthus annuus HOM05D006976 ORTHO05D008761 4.8e-59 231.5 191 62.3
HanXRQChr16g0528991 Helianthus annuus HOM05D006976 ORTHO05D008761 4.8e-59 231.5 191 62.3
HanXRQChr17g0548241 Helianthus annuus HOM05D006976 ORTHO05D008761 4.8e-59 231.5 191 62.3
HanXRQCPg0580041 Helianthus annuus HOM05D006976 ORTHO05D008761 4.8e-59 231.5 191 62.3
HanXRQChr15g0497531 Helianthus annuus HOM05D006976 ORTHO05D008761 1.1e-58 230.3 191 61.8
Nn2g14969 Nelumbo nucifera HOM05D006976 ORTHO05D008761 2.6e-57 225.7 191 62.3
Sed0001172 Sechium edule HOM05D006976 ORTHO05D008761 2.6e-57 225.7 192 62.0
GSVIVG01029875001 Vitis vinifera HOM05D006976 ORTHO05D008761 9.9e-57 223.8 186 63.4
Hund28750 Selenicereus undatus HOM05D006976 ORTHO05D008761 2.2e-56 222.6 182 63.2
Potri.013G162300 Populus trichocarpa HOM05D006976 ORTHO05D008761 3.8e-56 221.9 189 62.4
RcHm_v2.0_CPg0502081 Rosa chinensis HOM05D006976 ORTHO05D008761 1.1e-55 220.3 191 61.8
CAN.G129.10 Capsicum annuum HOM05D006976 ORTHO05D008761 1.4e-55 219.9 191 60.2
Potri.016G094100 Populus trichocarpa HOM05D006976 ORTHO05D008761 7.1e-55 217.6 189 61.4
SalBow1G3572 Salvia bowleyana HOM05D006976 ORTHO05D008761 7.1e-55 217.6 191 60.7
Hund29806 Selenicereus undatus HOM05D000806 ORTHO05D002324 7.1e-55 217.6 191 59.7
Hma1.2p1_1409F.1_g281660 Hydrangea macrophylla HOM05D006976 ORTHO05D008761 9.3e-55 217.2 187 62.0
BolSC49t61182H Brassica oleracea HOM05D006976 ORTHO05D008761 2.7e-54 215.7 132 81.8
Hund07993 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.7e-54 215.7 191 59.2
DCAR_032496 Daucus carota HOM05D006976 ORTHO05D008761 4.6e-54 214.9 191 60.2
Lj2P1239T139 Lonicera japonica HOM05D006976 ORTHO05D008761 4.6e-54 214.9 197 57.9
PSO548G0011 Papaver somniferum HOM05D006976 ORTHO05D008761 3.3e-52 208.8 191 56.5
BolSC29t60590H Brassica oleracea HOM05D006976 ORTHO05D008761 1.6e-51 206.5 153 72.5
arahy.Tifrunner.gnm1.ann1.Z0BJS7 Arachis hypogaea HOM05D000806 ORTHO05D002324 3.7e-51 205.3 191 58.6
CAN.G232.11 Capsicum annuum HOM05D006976 ORTHO05D008761 1.4e-50 203.4 191 56.5
BolSC35t60647H Brassica oleracea HOM05D006976 ORTHO05D008761 6.5e-48 194.5 135 75.6
Gohir.D01G101878 Gossypium hirsutum HOM05D006976 ORTHO05D008761 2.5e-47 192.6 167 62.9
Phvul.002G278108 Phaseolus vulgaris HOM05D006976 ORTHO05D008761 1.6e-46 189.9 188 54.8
Lj1P303T18 Lonicera japonica HOM05D006976 ORTHO05D008761 2.3e-45 186.0 174 56.3
HanXRQChr13g0421821 Helianthus annuus HOM05D006976 ORTHO05D008761 5.1e-45 184.9 166 60.2
Gohir.A09G041060 Gossypium hirsutum HOM05D006976 ORTHO05D008761 2.5e-44 182.6 154 63.6
HPP92_028424 Vanilla planifolia HOM05D006976 ORTHO05D008761 1.8e-42 176.4 195 51.3
Medtr5g019520 Medicago truncatula HOM05D006976 ORTHO05D008761 6.5e-40 167.9 168 56.0
HanXRQChr11g0345161 Helianthus annuus HOM05D006976 ORTHO05D008761 1.4e-39 166.8 160 57.5
HanXRQChr02g0044891 Helianthus annuus HOM05D006976 ORTHO05D008761 1.0e-37 160.6 114 69.3
BraSC59t46590Z Brassica rapa HOM05D006976 ORTHO05D008761 1.8e-37 159.8 106 75.5
Prupe.7G029500 Prunus persica HOM05D006976 ORTHO05D008761 9.7e-36 154.1 111 71.2
HanXRQChr05g0161171 Helianthus annuus HOM05D006976 ORTHO05D008761 3.7e-35 152.1 113 66.4
EL10Ac4g09265 Beta vulgaris HOM05D006976 ORTHO05D008761 4.8e-35 151.8 114 68.4
Lalb_Chr23g0274511 Lupinus albus HOM05D006976 ORTHO05D008761 6.3e-35 151.4 158 53.8
Solyc00g500020.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 1.3e-32 143.7 156 53.2
Solyc00g500067.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 1.3e-32 143.7 156 53.2
GSVIVG01030620001 Vitis vinifera HOM05D006976 ORTHO05D008761 2.2e-32 142.9 124 60.5
Oeu012774.1 Olea europaea HOM05D006976 ORTHO05D008761 1.9e-31 139.8 119 59.7
FvH4_3g27991 Fragaria vesca HOM05D006976 ORTHO05D008761 1.6e-30 136.7 99 69.7
Gohir.D02G130401 Gossypium hirsutum HOM05D006976 ORTHO05D008761 1.6e-30 136.7 127 61.4
arahy.Tifrunner.gnm1.ann1.Z0Q6DR Arachis hypogaea HOM05D006976 ORTHO05D008761 3.6e-30 135.6 102 68.6
TAR633G2101 Trochodendron aralioides HOM05D006976 ORTHO05D008761 1.8e-29 133.3 120 57.5
Eucgr.I02539 Eucalyptus grandis HOM05D006976 ORTHO05D008761 1.5e-28 130.2 106 64.2
Lalb_Chr18g0049641 Lupinus albus HOM05D006976 ORTHO05D008761 1.5e-28 130.2 156 51.9
Gorai.002G160100 Gossypium raimondii HOM05D006976 ORTHO05D008761 2.6e-28 129.4 100 67.0
Gorai.001G104700 Gossypium raimondii HOM05D006976 ORTHO05D008761 3.3e-28 129.0 122 58.2
CAN.G16.7 Capsicum annuum HOM05D006976 ORTHO05D008761 2.2e-27 126.3 134 50.0
BolSC46t61001H Brassica oleracea HOM05D006976 ORTHO05D008761 1.8e-26 123.2 75 85.3
Gohir.D07G097266 Gossypium hirsutum HOM05D006976 ORTHO05D008761 1.8e-26 123.2 118 56.8
C09p40410 Brassica napus HOM05D006976 ORTHO05D008761 9.1e-26 120.9 55 98.2
HPP92_022279 Vanilla planifolia HOM05D006976 ORTHO05D008761 9.1e-26 120.9 138 50.0
EL10As15g24128 Beta vulgaris HOM05D000806 ORTHO05D002324 3.4e-25 119.0 94 67.0
Gorai.005G146300 Gossypium raimondii HOM05D006976 ORTHO05D008761 7.7e-25 117.9 120 57.5
HanXRQChr02g0041581 Helianthus annuus HOM05D000806 ORTHO05D002324 1.3e-24 117.1 162 46.3
Psat0s2754g0120 Pisum sativum HOM05D000806 ORTHO05D002324 1.3e-24 117.1 128 50.8
Psat0s2288g0200 Pisum sativum HOM05D006976 ORTHO05D008761 2.9e-24 115.9 128 50.8
Glyma.07G028150 Glycine max HOM05D006976 ORTHO05D008761 5.0e-24 115.2 88 63.6
QL93p0999_0001 Quercus lobata HOM05D006976 ORTHO05D008761 1.6e-22 110.2 103 58.3
BNapus_Darmor_BZH_scaffold_253p00220 Brassica napus HOM05D000806 ORTHO05D002324 2.0e-20 103.2 50 98.0
Peaxi162Scf00413g00828 Petunia axillaris HOM05D000806 ORTHO05D002324 5.7e-20 101.7 92 60.9
GSVIVG01017636001 Vitis vinifera HOM05D006976 ORTHO05D008761 1.8e-18 96.7 133 50.4
Gohir.A01G204050 Gossypium hirsutum HOM05D006976 ORTHO05D008761 1.6e-17 93.6 61 75.4
Migut.D01165 Erythranthe guttata HOM05D006976 ORTHO05D008761 2.0e-17 93.2 70 65.7
HanXRQChr08g0209641 Helianthus annuus HOM05D006976 ORTHO05D008761 3.5e-17 92.4 74 63.5
Peaxi162Scf00021g00087 Petunia axillaris HOM05D000806 ORTHO05D002324 3.5e-17 92.4 113 49.6
BraSC103t45467Z Brassica rapa HOM05D006976 ORTHO05D008761 5.9e-17 91.7 51 92.2
Nitab4.5_0010235g0040 Nicotiana tabacum HOM05D006976 ORTHO05D008761 5.9e-17 91.7 84 58.3
SEGI_11203 Sequoiadendron giganteum HOM05D006976 ORTHO05D008761 2.2e-16 89.7 81 55.6
Nn010s41437 Nelumbo nucifera HOM05D006976 ORTHO05D008761 5.0e-16 88.6 54 75.9
TPR.G11768 Trifolium pratense HOM05D006976 ORTHO05D008761 1.9e-15 86.7 87 54.0
Nitab4.5_0007680g0040 Nicotiana tabacum HOM05D006976 ORTHO05D008761 7.2e-15 84.7 51 76.5
Nn010s41442 Nelumbo nucifera HOM05D006976 ORTHO05D008761 9.4e-15 84.3 78 57.7
Migut.G01116 Erythranthe guttata HOM05D006976 ORTHO05D008761 3.6e-14 82.4 71 62.0
Lalb_Chr03g0036051 Lupinus albus HOM05D006976 ORTHO05D008761 3.6e-14 82.4 103 46.6
Sc03g0010000 Simmondsia chinensis HOM05D006976 ORTHO05D008761 3.6e-14 82.4 53 69.8
Oeu028777.1 Olea europaea HOM05D000806 ORTHO05D002324 6.1e-14 81.6 54 68.5
Gorai.007G243600 Gossypium raimondii HOM05D000806 ORTHO05D002324 2.2e-11 73.2 47 78.7
GSVIVG01037398001 Vitis vinifera HOM05D006976 ORTHO05D008761 2.8e-11 72.8 42 76.2
Medtr3g111320 Medicago truncatula HOM05D006976 ORTHO05D008761 3.7e-11 72.4 80 50.0
Oeu039082.1 Olea europaea HOM05D006976 ORTHO05D008761 6.3e-11 71.6 93 47.3
TPR.G15439 Trifolium pratense HOM05D006976 ORTHO05D008761 4.1e-10 68.9 74 50.0
Nitab4.5_0002181g0020 Nicotiana tabacum HOM05D006976 ORTHO05D008761 5.3e-10 68.6 77 45.5
Hund10572 Selenicereus undatus HOM05D006976 ORTHO05D008761 6.5e-08 61.6 59 52.5
Gorai.012G112700 Gossypium raimondii HOM05D000806 ORTHO05D002324 8.5e-08 61.2 34 76.5
Lalb_Chr03g0039211 Lupinus albus HOM05D006976 ORTHO05D008761 8.5e-08 61.2 43 72.1
MD10G1104000 Malus domestica HOM05D006976 ORTHO05D008761 1.5e-07 60.5 53 56.6
Eucgr.I00197 Eucalyptus grandis HOM05D006976 ORTHO05D008761 4.2e-07 58.9 27 85.2
Gorai.012G094700 Gossypium raimondii HOM05D000806 ORTHO05D002324 5.5e-07 58.5 30 83.3
Glyma.14G104700 Glycine max HOM05D006976 ORTHO05D008761 1.2e-06 57.4 135 27.4
Oeu062852.1 Olea europaea HOM05D006976 ORTHO05D008761 4.7e-06 55.5 36 61.1
Gohir.D04G084920 Gossypium hirsutum HOM05D000806 ORTHO05D002324 6.1e-06 55.1 30 76.7


User provided reference genes

Program Settings