Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 1.1e-107 393.3 202 100.0
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 4.4e-107 391.3 202 99.5
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 5.7e-107 391.0 202 99.5
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 7.4e-107 390.6 202 99.5
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 4.8e-106 387.9 202 98.5
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 4.8e-106 387.9 202 98.5
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 4.8e-106 387.9 202 98.5
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 4.8e-106 387.9 202 98.5
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 4.8e-106 387.9 202 98.5
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 4.8e-106 387.9 202 98.5
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 4.8e-106 387.9 202 98.5
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 4.8e-106 387.9 202 98.5
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 4.8e-106 387.9 202 98.5
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 2.1e-101 372.5 204 96.1
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 2.9e-95 352.1 202 90.1
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 5.0e-95 351.3 202 89.6
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 5.0e-95 351.3 202 89.1
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 6.5e-95 350.9 202 90.1
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 6.5e-95 350.9 202 90.1
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 6.5e-95 350.9 202 90.1
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 6.5e-95 350.9 202 90.1
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 6.5e-95 350.9 202 90.1
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 6.5e-95 350.9 202 90.1
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 6.5e-95 350.9 202 90.1
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 5.5e-94 347.8 202 89.6
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 1.6e-93 346.3 202 89.1
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 2.1e-93 345.9 202 88.1
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.1e-93 345.9 202 89.1
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.1e-93 345.9 202 89.1
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 3.6e-93 345.1 202 87.1
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 8.0e-93 344.0 202 88.1
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 1.4e-92 343.2 202 88.1
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 1.4e-92 343.2 202 88.1
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 3.0e-92 342.0 202 88.1
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 3.0e-92 342.0 202 88.1
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 4.0e-92 341.7 202 88.6
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 8.8e-92 340.5 202 86.6
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 8.8e-92 340.5 202 87.6
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 2.2e-90 335.9 202 86.6
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 8.5e-87 323.9 202 84.2
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 2.1e-85 319.3 204 84.8
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 2.1e-85 319.3 204 84.8
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 2.3e-84 315.8 202 82.7
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.2e-83 313.5 202 82.7
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 1.7e-82 309.7 202 79.7
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 1.7e-82 309.7 202 79.7
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 1.7e-82 309.7 202 79.7
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 1.7e-82 309.7 202 79.7
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 1.7e-82 309.7 202 79.7
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 1.7e-82 309.7 202 79.7
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 1.7e-82 309.7 202 79.7
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 3.1e-81 305.4 199 80.4
Thhalv10010766m.g Eutrema salsugineum HOM05D005573 ORTHO05D007161 1.0e-79 300.4 202 81.2
Glyma.01G153400 Glycine max HOM05D005573 ORTHO05D007161 3.8e-79 298.5 185 82.2
C09p29560 Brassica napus HOM05D005573 ORTHO05D007161 6.6e-79 297.7 157 98.1
Gorai.006G201300 Gossypium raimondii HOM05D005573 ORTHO05D007161 2.3e-76 289.3 182 83.5
EL10As12g24021 Beta vulgaris HOM05D005573 ORTHO05D007161 3.0e-76 288.9 178 83.7
Gohir.D09G179300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.2e-75 287.0 182 83.0
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 4.9e-74 281.6 182 83.0
Medtr0002s0590 Medicago truncatula HOM05D005573 ORTHO05D007161 9.2e-73 277.3 182 78.0
Zm00001eb039100 Zea mays HOM05D005573 ORTHO05D007161 8.9e-68 260.8 172 78.5
Zm00001eb231240 Zea mays HOM05D005573 ORTHO05D007161 1.7e-66 256.5 177 75.7
Lalb_Chr07g0191491 Lupinus albus HOM05D005573 ORTHO05D007161 9.2e-65 250.8 151 86.1
SEGI_18745 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 1.0e-63 247.3 208 64.4
Gohir.A09G103300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.6e-61 238.8 163 79.1
Nitab4.5_0006596g0030 Nicotiana tabacum HOM05D005573 ORTHO05D007161 2.3e-60 236.1 148 84.5
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 2.0e-59 233.0 156 80.1
TWI60G0396 Tripterygium wilfordii HOM05D005573 ORTHO05D007161 2.6e-59 232.6 138 84.1
GSVIVG01021975001 Vitis vinifera HOM05D005573 ORTHO05D007161 1.5e-54 216.9 132 87.1
BraSC25t45875Z Brassica rapa HOM05D005573 ORTHO05D007161 6.8e-52 208.0 103 99.0
arahy.Tifrunner.gnm1.ann1.NT5R3P Arachis hypogaea HOM05D005573 ORTHO05D007161 8.9e-52 207.6 151 73.5
Nn2g13212 Nelumbo nucifera HOM05D005573 ORTHO05D007161 4.6e-48 195.3 114 86.0
Nn423s46610 Nelumbo nucifera HOM05D005573 ORTHO05D007161 4.6e-48 195.3 114 86.0
Gohir.A10G100366 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.3e-47 193.7 114 84.2
HanXRQChr13g0413641 Helianthus annuus HOM05D005573 ORTHO05D007161 3.0e-47 192.6 114 85.1
HanXRQChr13g0413711 Helianthus annuus HOM05D005573 ORTHO05D007161 3.0e-47 192.6 114 85.1
HanXRQChr13g0413781 Helianthus annuus HOM05D005573 ORTHO05D007161 3.0e-47 192.6 114 85.1
HanXRQChr13g0413861 Helianthus annuus HOM05D005573 ORTHO05D007161 3.0e-47 192.6 114 85.1
HanXRQChr13g0413931 Helianthus annuus HOM05D005573 ORTHO05D007161 3.0e-47 192.6 114 85.1
Nn6g33243 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.9e-46 189.9 114 83.3
Oeu062838.1 Olea europaea HOM05D005573 ORTHO05D007161 7.3e-46 188.0 129 80.6
Gohir.A07G163636 Gossypium hirsutum HOM05D005573 ORTHO05D007161 9.6e-46 187.6 114 82.5
Eucgr.B02956 Eucalyptus grandis HOM05D005573 ORTHO05D007161 1.2e-45 187.2 114 79.8
CDE08G0454 Ceratophyllum demersum HOM05D000219 ORTHO05D000226 3.6e-45 185.7 114 81.6
ClCG00G003940 Citrullus lanatus HOM05D005573 ORTHO05D007161 4.7e-45 185.3 101 96.0
Zm00001eb438350 Zea mays HOM05D005573 ORTHO05D007161 3.4e-43 179.1 114 78.9
Potri.013G163300 Populus trichocarpa HOM05D005573 ORTHO05D007161 9.3e-41 171.0 103 81.6
CAN.G1478.12 Capsicum annuum HOM05D005573 ORTHO05D007161 1.6e-40 170.2 103 83.5
Phvul.011G056580 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 1.7e-39 166.8 101 85.1
CAN.G129.6 Capsicum annuum HOM05D005573 ORTHO05D007161 3.9e-39 165.6 103 81.6
Solyc09g015310.3 Solanum lycopersicum HOM05D005573 ORTHO05D007161 1.5e-38 163.7 102 79.4
Lalb_Chr15g0080691 Lupinus albus HOM05D005573 ORTHO05D007161 1.9e-38 163.3 103 77.7
CAN.G100.47 Capsicum annuum HOM05D005573 ORTHO05D007161 3.1e-36 156.0 103 76.7
Nn5g30925 Nelumbo nucifera HOM05D005573 ORTHO05D007161 4.0e-36 155.6 90 84.4
Phvul.008G150500 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 9.0e-36 154.5 94 76.6
Migut.D01353 Erythranthe guttata HOM05D005573 ORTHO05D007161 2.0e-35 153.3 143 62.2
SMO086G0035 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 3.5e-32 142.5 193 47.2
SMO086G0038 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 3.5e-32 142.5 193 47.2
BolC9t56936H Brassica oleracea HOM05D005573 ORTHO05D007161 1.0e-31 141.0 77 93.5
BolSC29t60458H Brassica oleracea HOM05D005573 ORTHO05D007161 6.6e-31 138.3 69 98.6
BolSC47t61104H Brassica oleracea HOM05D005573 ORTHO05D007161 6.6e-31 138.3 69 98.6
Zm00001eb434930 Zea mays HOM05D005573 ORTHO05D007161 3.3e-30 136.0 89 75.3
Gohir.A09G045300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.1e-28 129.4 70 95.7
SEGI_40009 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 6.9e-28 128.3 111 64.0
arahy.Tifrunner.gnm1.ann1.NAZW4C Arachis hypogaea HOM05D005573 ORTHO05D007161 2.6e-27 126.3 104 65.4
Gohir.A09G045446 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.4e-27 125.9 74 83.8
BolC7t41664H Brassica oleracea HOM05D005573 ORTHO05D007161 4.9e-26 122.1 76 80.3
TAR625G0941 Trochodendron aralioides HOM05D005573 ORTHO05D007161 4.9e-26 122.1 75 77.3
BolSC47t61119H Brassica oleracea HOM05D005573 ORTHO05D007161 1.1e-25 120.9 64 96.9
Oeu056456.1 Olea europaea HOM05D005573 ORTHO05D007161 1.2e-24 117.5 66 84.8
CAN.G63.13 Capsicum annuum HOM05D005573 ORTHO05D007161 1.3e-23 114.0 77 72.7
HanXRQChr00c0345g0573881 Helianthus annuus HOM05D005573 ORTHO05D007161 1.8e-23 113.6 67 83.6
CiPaw.12G056900 Carya illinoinensis HOM05D005573 ORTHO05D007161 2.3e-23 113.2 74 74.3
Sc09g0006540 Simmondsia chinensis HOM05D005573 ORTHO05D005696 1.9e-22 110.2 79 75.9
Nn071s42388 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.3e-21 107.5 77 81.8
Solyc11g022610.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 1.6e-21 107.1 87 72.4
CAN.G653.3 Capsicum annuum HOM05D005573 ORTHO05D007161 1.4e-20 104.0 64 82.8
Mapoly0090s0058 Marchantia polymorpha HOM05D005573 ORTHO05D007161 2.2e-18 96.7 66 71.2
CAN.G331.1 Capsicum annuum HOM05D005573 ORTHO05D007161 2.9e-18 96.3 64 71.9
TAR375G0006 Trochodendron aralioides HOM05D005573 ORTHO05D007161 8.4e-18 94.7 61 77.0
MELO3C027485.2 Cucumis melo HOM05D005573 ORTHO05D007161 1.6e-16 90.5 50 86.0
BraSC25t45840Z Brassica rapa HOM05D005573 ORTHO05D007161 4.6e-16 89.0 52 90.4
MELO3C022836.2 Cucumis melo HOM05D005573 ORTHO05D007161 6.0e-16 88.6 49 85.7
Oeu052069.1 Olea europaea HOM05D005573 ORTHO05D007161 5.1e-15 85.5 109 51.4
Nn055s41940 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.9e-14 83.6 48 83.3
Nn021s41552 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.8e-12 77.0 41 92.7
Oeu042745.1 Olea europaea HOM05D005573 ORTHO05D007161 6.9e-12 75.1 104 49.0
HanXRQChr13g0413681 Helianthus annuus HOM05D005573 ORTHO05D029920 1.2e-11 74.3 45 80.0
HanXRQChr13g0413751 Helianthus annuus HOM05D005573 ORTHO05D029920 1.2e-11 74.3 45 80.0
HanXRQChr13g0413831 Helianthus annuus HOM05D005573 ORTHO05D029920 1.2e-11 74.3 45 80.0
HanXRQChr13g0413901 Helianthus annuus HOM05D005573 ORTHO05D029920 1.2e-11 74.3 45 80.0
Solyc11g022620.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 1.2e-11 74.3 55 65.5
BolC9t55817H Brassica oleracea HOM05D005573 ORTHO05D007161 5.8e-11 72.0 48 79.2
BolSC29t60581H Brassica oleracea HOM05D005573 ORTHO05D007161 1.0e-10 71.2 36 100.0
ClCG11G007200 Citrullus lanatus HOM05D005573 ORTHO05D007161 2.9e-10 69.7 46 71.7
Nitab4.5_0000261g0250 Nicotiana tabacum HOM05D005573 ORTHO05D007161 2.9e-10 69.7 42 81.0
Nn055s41939 Nelumbo nucifera HOM05D005573 ORTHO05D007161 6.5e-10 68.6 37 89.2
Glyma.18G203700 Glycine max HOM05D005573 ORTHO05D007161 9.3e-09 64.7 40 82.5
Oeu041772.1 Olea europaea HOM05D005573 ORTHO05D007161 2.1e-08 63.5 58 62.1


User provided reference genes

Program Settings