Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G66380 Arabidopsis lyrata HOM05D041492 ORTHO05D031333 5.2e-72 274.2 136 100.0
AL1G66260 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 2.2e-17 92.8 137 44.5
Carub.0002s0747 Capsella rubella HOM05D000005 ORTHO05D000449 3.1e-16 89.0 147 42.9
AT1G56540 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 1.7e-14 83.2 106 46.2
Carub.0002s0748 Capsella rubella HOM05D000005 ORTHO05D000449 2.1e-12 76.3 83 48.2
Carub.0002s0749 Capsella rubella HOM05D000005 ORTHO05D000449 6.1e-12 74.7 77 51.9
Carub.0002s0750 Capsella rubella HOM05D000005 ORTHO05D000449 1.5e-10 70.1 81 49.4
Carub.0002s0097 Capsella rubella HOM05D000005 ORTHO05D000449 7.4e-10 67.8 85 49.4
CARHR047140 Cardamine hirsuta HOM05D000005 ORTHO05D000449 9.7e-10 67.4 75 44.0
AT1G63870 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 1.3e-09 67.0 106 40.6
Thhalv10000023m.g Eutrema salsugineum HOM05D000005 ORTHO05D000449 4.8e-09 65.1 113 41.6
AL2G11240 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 1.8e-08 63.2 79 50.6
Carub.0002s0095 Capsella rubella HOM05D000005 ORTHO05D000449 2.4e-08 62.8 102 35.3
Carub.0002s0093 Capsella rubella HOM05D000005 ORTHO05D000449 3.1e-08 62.4 101 41.6
CARHR055030 Cardamine hirsuta HOM05D000005 ORTHO05D000449 3.1e-08 62.4 188 31.4
C09p16850 Brassica napus HOM05D041492 ORTHO05D031333 1.5e-07 60.1 74 45.9
AT5G58120 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 3.4e-07 58.9 142 37.3
A09p15210 Brassica napus HOM05D000005 ORTHO05D000449 4.5e-07 58.5 89 40.4
BolC9t54583H Brassica oleracea HOM05D041492 ORTHO05D031333 1.0e-06 57.4 46 58.7
CARHR047110 Cardamine hirsuta HOM05D000005 ORTHO05D018715 1.0e-06 57.4 59 45.8
A09p15220 Brassica napus HOM05D000005 ORTHO05D000449 1.3e-06 57.0 78 44.9
BolC9t54581H Brassica oleracea HOM05D000005 ORTHO05D000449 1.3e-06 57.0 96 40.6
BolC9t54743H Brassica oleracea HOM05D000005 ORTHO05D000449 1.3e-06 57.0 78 43.6
Carub.0002s0461 Capsella rubella HOM05D000005 ORTHO05D000449 1.3e-06 57.0 74 43.2
AL2G11260 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 1.7e-06 56.6 65 50.8
BcaC04g22513 Brassica carinata HOM05D000005 ORTHO05D000449 1.7e-06 56.6 89 39.3
C09p18470 Brassica napus HOM05D000005 ORTHO05D000449 1.7e-06 56.6 89 39.3
BolC9t54742H Brassica oleracea HOM05D000005 ORTHO05D000449 1.7e-06 56.6 89 39.3
BraA09t37166Z Brassica rapa HOM05D000005 ORTHO05D000449 2.9e-06 55.8 78 43.6
AT1G56510 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 8.5e-06 54.3 99 39.4
BcaC04g22512 Brassica carinata HOM05D000005 ORTHO05D000449 8.5e-06 54.3 77 42.9
C09p18480 Brassica napus HOM05D000005 ORTHO05D000449 8.5e-06 54.3 77 42.9


User provided reference genes

Program Settings