Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G52910 Arabidopsis lyrata HOM05D004452 ORTHO05D005358 3.5e-253 877.9 458 100.0
AT1G45233 Arabidopsis thaliana HOM05D004452 ORTHO05D005358 2.9e-223 778.5 454 89.2
Carub.0001s3568 Capsella rubella HOM05D004452 ORTHO05D005358 5.2e-217 757.7 450 86.7
Sp1g34090 Schrenkiella parvula HOM05D004452 ORTHO05D005358 1.2e-200 703.4 449 82.0
Thhalv10011479m.g Eutrema salsugineum HOM05D004452 ORTHO05D005358 1.1e-195 686.8 451 80.5
CARHR036370 Cardamine hirsuta HOM05D004452 ORTHO05D005358 5.8e-192 674.5 448 80.4
BraA10t42942Z Brassica rapa HOM05D004452 ORTHO05D005358 2.7e-181 639.0 437 77.1
A10p06900 Brassica napus HOM05D004452 ORTHO05D005358 1.8e-180 636.3 450 74.7
BolC6t35279H Brassica oleracea HOM05D004452 ORTHO05D005358 2.3e-180 636.0 446 74.4
BcaC08g42910 Brassica carinata HOM05D004452 ORTHO05D005358 2.8e-178 629.0 448 73.9
C06p01470 Brassica napus HOM05D004452 ORTHO05D005358 6.3e-178 627.9 448 73.7
THA.LOC104822853 Tarenaya hassleriana HOM05D004452 ORTHO05D005358 1.7e-167 593.2 469 68.0
BcaB07g33871 Brassica carinata HOM05D004452 ORTHO05D005358 1.1e-163 580.5 443 70.2
AL8G17930 Arabidopsis lyrata HOM05D004452 ORTHO05D005358 4.4e-163 578.6 458 67.5
Thhalv10003147m.g Eutrema salsugineum HOM05D004452 ORTHO05D005358 6.3e-162 574.7 473 66.2
Carub.0008s0587 Capsella rubella HOM05D004452 ORTHO05D005358 2.0e-160 569.7 458 66.4
Aa31sc108G100 Aethionema arabicum HOM05D004452 ORTHO05D005358 2.6e-160 569.3 466 68.0
BcaC06g31738 Brassica carinata HOM05D004452 ORTHO05D005358 3.5e-160 568.9 473 65.8
CARHR181170 Cardamine hirsuta HOM05D004452 ORTHO05D005358 2.9e-159 565.8 459 66.2
Sp2g07660 Schrenkiella parvula HOM05D004452 ORTHO05D005358 2.9e-159 565.8 473 65.3
AT5G42920 Arabidopsis thaliana HOM05D004452 ORTHO05D005358 1.1e-158 563.9 458 66.8
Cfa018088 Carpinus fangiana HOM05D004452 ORTHO05D005358 1.9e-158 563.1 462 64.3
Aa31LG9G12980 Aethionema arabicum HOM05D004452 ORTHO05D005358 9.4e-158 560.8 461 66.8
Gohir.A05G203100 Gossypium hirsutum HOM05D004452 ORTHO05D005358 6.7e-156 554.7 458 64.0
BcaC02g10792 Brassica carinata HOM05D004452 ORTHO05D005358 5.7e-155 551.6 476 64.9
C04p25060 Brassica napus HOM05D004452 ORTHO05D005358 5.7e-155 551.6 476 64.9
BolC4t24007H Brassica oleracea HOM05D004452 ORTHO05D005358 5.7e-155 551.6 476 64.9
THA.LOC104812571 Tarenaya hassleriana HOM05D004452 ORTHO05D005358 9.7e-155 550.8 463 63.5
CiPaw.15G055600 Carya illinoinensis HOM05D004452 ORTHO05D005358 1.7e-154 550.1 462 63.9
Prupe.1G434400 Prunus persica HOM05D004452 ORTHO05D005358 1.8e-153 546.6 471 62.0
Manes.18G038000 Manihot esculenta HOM05D004452 ORTHO05D005358 2.4e-153 546.2 457 63.0
Duzib093G1704 Durio zibethinus HOM05D004452 ORTHO05D005358 7.0e-153 544.7 458 63.1
Thecc.08G005800 Theobroma cacao HOM05D004452 ORTHO05D005358 7.0e-153 544.7 458 62.7
TAR381G1434 Trochodendron aralioides HOM05D004452 ORTHO05D005358 1.6e-152 543.5 459 62.7
RcHm_v2.0_Chr6g0308041 Rosa chinensis HOM05D004452 ORTHO05D005358 2.7e-152 542.7 459 63.4
COL.COLO4_26520 Corchorus olitorius HOM05D004452 ORTHO05D005358 5.9e-152 541.6 455 62.9
Ciclev10000290m.g Citrus clementina HOM05D004452 ORTHO05D005358 3.8e-151 538.9 457 61.9
MD15G1081700 Malus domestica HOM05D004452 ORTHO05D005358 5.0e-151 538.5 457 62.1
Potri.014G028100 Populus trichocarpa HOM05D004452 ORTHO05D005358 1.1e-150 537.3 457 63.5
Actinidia23285 Actinidia chinensis HOM05D004452 ORTHO05D005358 1.2e-149 533.9 459 62.3
QL02p004676 Quercus lobata HOM05D004452 ORTHO05D005358 1.2e-149 533.9 461 61.6
CSS0026728 Camellia sinensis var. sinensis HOM05D004452 ORTHO05D005358 1.6e-149 533.5 461 61.8
BraA06t27686Z Brassica rapa HOM05D004452 ORTHO05D005358 3.6e-149 532.3 460 63.9
A06p48170 Brassica napus HOM05D004452 ORTHO05D005358 4.7e-149 531.9 460 64.1
Sabra14G0019200 Salix brachista HOM05D004452 ORTHO05D005358 1.0e-148 530.8 457 62.6
GSVIVG01009484001 Vitis vinifera HOM05D004452 ORTHO05D005358 1.0e-148 530.8 445 63.6
Dinv35952 Davidia involucrata HOM05D004452 ORTHO05D005358 5.2e-148 528.5 452 62.6
FAN15G1326 Fragaria x ananassa HOM05D004452 ORTHO05D005358 6.8e-148 528.1 459 62.1
FAN27G2914 Fragaria x ananassa HOM05D004452 ORTHO05D005358 6.8e-148 528.1 459 62.3
FvH4_2g34320 Fragaria vesca HOM05D004452 ORTHO05D005358 8.8e-148 527.7 459 61.7
Cc10_g04060 Coffea canephora HOM05D004452 ORTHO05D005358 1.2e-147 527.3 454 61.7
FAN20G1510 Fragaria x ananassa HOM05D004452 ORTHO05D005358 1.5e-147 526.9 459 62.3
Glyma.06G040600 Glycine max HOM05D004452 ORTHO05D005358 9.8e-147 524.2 457 61.5
CiPaw.16G042900 Carya illinoinensis HOM05D004452 ORTHO05D005358 1.3e-146 523.9 457 61.1
Lj4A59T44 Lonicera japonica HOM05D004452 ORTHO05D005358 3.7e-146 522.3 472 60.6
Gohir.D05G206300 Gossypium hirsutum HOM05D004452 ORTHO05D005358 6.3e-146 521.5 427 65.1
TWI56G0235 Tripterygium wilfordii HOM05D004452 ORTHO05D005358 2.4e-145 519.6 470 59.8
Dinv39307 Davidia involucrata HOM05D004452 ORTHO05D005358 3.1e-145 519.2 470 59.8
Rhsim06G0050800 Rhododendron simsii HOM05D004452 ORTHO05D005358 7.0e-145 518.1 471 58.4
Cpa.g.sc49.27 Carica papaya HOM05D004452 ORTHO05D005358 1.6e-144 516.9 453 61.1
Gorai.009G212700 Gossypium raimondii HOM05D004452 ORTHO05D005358 2.0e-144 516.5 427 64.6
Nn5g30286 Nelumbo nucifera HOM05D004452 ORTHO05D005358 2.7e-144 516.2 463 59.4
MBI06_g02568_MAGBIO Magnolia biondii HOM05D004452 ORTHO05D005358 1.0e-143 514.2 459 59.9
vmacro21515 Vaccinium macrocarpon HOM05D004452 ORTHO05D005358 1.0e-143 514.2 459 59.5
Lalb_Chr11g0062611 Lupinus albus HOM05D004452 ORTHO05D005358 1.7e-143 513.5 463 60.5
CAN.G1030.10 Capsicum annuum HOM05D004452 ORTHO05D005358 3.8e-143 512.3 460 60.0
Ca_15944_v3 Cicer arietinum L. HOM05D004452 ORTHO05D005358 6.5e-143 511.5 457 59.5
TPR.G24198 Trifolium pratense HOM05D004452 ORTHO05D005358 6.5e-143 511.5 453 59.8
TWI36G0852 Tripterygium wilfordii HOM05D004452 ORTHO05D005358 6.5e-143 511.5 470 58.5
Glyma.04G039400 Glycine max HOM05D004452 ORTHO05D005358 1.9e-142 510.0 457 59.7
Atru.chr13.704 Acer truncatum HOM05D004452 ORTHO05D005358 2.5e-142 509.6 465 58.5
Eucgr.F02336 Eucalyptus grandis HOM05D004452 ORTHO05D005358 2.5e-142 509.6 460 60.4
ClCG05G019920 Citrullus lanatus HOM05D004452 ORTHO05D005358 3.2e-142 509.2 460 58.5
PSO170G2588 Papaver somniferum HOM05D004452 ORTHO05D005358 4.2e-142 508.8 470 58.7
PGR031G1897 Punica granatum HOM05D004452 ORTHO05D005358 4.2e-142 508.8 458 59.6
Sc15g0006090 Simmondsia chinensis HOM05D004452 ORTHO05D005358 5.5e-142 508.4 468 59.2
PGSC0003DMG400007967 Solanum tuberosum HOM05D004452 ORTHO05D005358 7.2e-142 508.1 460 59.3
Lj1g0004160 Lotus japonicus HOM05D004452 ORTHO05D005358 9.5e-142 507.7 456 59.9
FAN24G0195 Fragaria x ananassa HOM05D004452 ORTHO05D005358 1.2e-141 507.3 508 55.9
MELO3C016756.2 Cucumis melo HOM05D004452 ORTHO05D005358 1.6e-141 506.9 460 58.0
PSO210G0441 Papaver somniferum HOM05D004452 ORTHO05D005358 2.1e-141 506.5 470 58.5
Aqoxy5G01224 Aquilegia oxysepala HOM05D004452 ORTHO05D005358 6.1e-141 505.0 462 58.2
Medtr3g101790 Medicago truncatula HOM05D004452 ORTHO05D005358 8.0e-141 504.6 459 58.8
Lsat_1_v5_gn_1_21181 Lactuca sativa HOM05D004452 ORTHO05D005358 1.8e-140 503.4 465 59.6
Psat5g042600 Pisum sativum HOM05D004452 ORTHO05D005358 5.2e-140 501.9 460 57.8
CsaV3_4G034360 Cucumis sativus L. HOM05D004452 ORTHO05D005358 6.8e-140 501.5 460 57.8
Solyc04g078830.3 Solanum lycopersicum HOM05D004452 ORTHO05D005358 6.8e-140 501.5 460 59.1
Nitab4.5_0002760g0030 Nicotiana tabacum HOM05D004452 ORTHO05D005358 8.8e-140 501.1 460 59.3
Oeu043579.4 Olea europaea HOM05D004452 ORTHO05D005358 2.6e-139 499.6 454 58.1
CANSAT11G1000 Cannabis sativa HOM05D004452 ORTHO05D005358 4.4e-139 498.8 470 59.8
Nitab4.5_0000287g0200 Nicotiana tabacum HOM05D004452 ORTHO05D005358 7.5e-139 498.0 460 59.6
AUR62041892 Chenopodium quinoa HOM05D004452 ORTHO05D005358 6.3e-138 495.0 458 57.9
Phvul.009G065600 Phaseolus vulgaris HOM05D004452 ORTHO05D005358 6.3e-138 495.0 457 58.0
arahy.Tifrunner.gnm1.ann1.Y5ZCTQ Arachis hypogaea HOM05D004452 ORTHO05D005358 1.4e-137 493.8 463 57.5
VMungo1309G1308 Vigna mungo HOM05D004452 ORTHO05D005358 2.4e-137 493.0 457 57.8
arahy.Tifrunner.gnm1.ann1.UAD7VL Arachis hypogaea HOM05D004452 ORTHO05D005358 9.2e-137 491.1 463 57.2
CDE08G0013 Ceratophyllum demersum HOM05D004452 ORTHO05D005358 1.2e-136 490.7 452 56.9
Sed0009272 Sechium edule HOM05D004452 ORTHO05D005358 1.2e-136 490.7 456 57.5
Hund23866 Selenicereus undatus HOM05D004452 ORTHO05D005358 2.7e-136 489.6 464 56.2
SGA_v2.0_scaffold28G11777 Striga asiatica HOM05D004452 ORTHO05D005358 3.5e-136 489.2 454 57.9
EL10Ac1g01836 Beta vulgaris HOM05D004452 ORTHO05D005358 2.9e-135 486.1 458 57.9
Migut.N02714 Erythranthe guttata HOM05D004452 ORTHO05D005358 6.6e-135 485.0 454 56.8
DCAR_019448 Daucus carota HOM05D004452 ORTHO05D005358 8.6e-135 484.6 452 59.3
arahy.Tifrunner.gnm1.ann1.IXK305 Arachis hypogaea HOM05D004452 ORTHO05D005358 5.6e-134 481.9 460 56.3
arahy.Tifrunner.gnm1.ann1.VB8FSW Arachis hypogaea HOM05D004452 ORTHO05D005358 5.6e-134 481.9 460 56.3
CANSAT11G0118 Cannabis sativa HOM05D004452 ORTHO05D005358 9.5e-134 481.1 463 57.5
HanXRQChr02g0039511 Helianthus annuus HOM05D004452 ORTHO05D005358 2.8e-133 479.6 463 57.9
ECA247G0253 Erigeron canadensis HOM05D004452 ORTHO05D005358 4.0e-132 475.7 468 56.4
MSTRG.24335 Avicennia marina HOM05D004452 ORTHO05D005358 6.8e-132 474.9 455 56.0
Peaxi162Scf00252g00221 Petunia axillaris HOM05D004452 ORTHO05D005358 3.4e-131 472.6 459 56.4
Sc02g0007190 Simmondsia chinensis HOM05D004452 ORTHO05D005358 1.7e-130 470.3 471 55.2
Lalb_Chr08g0245391 Lupinus albus HOM05D004452 ORTHO05D005358 4.9e-130 468.8 461 56.6
Glyma.17G241800 Glycine max HOM05D004452 ORTHO05D005358 6.4e-130 468.4 463 55.7
Phvul.001G022500 Phaseolus vulgaris HOM05D004452 ORTHO05D005358 6.4e-130 468.4 463 55.5
Glyma.14G083300 Glycine max HOM05D004452 ORTHO05D005358 1.1e-129 467.6 464 55.8
ATR1126G044 Amborella trichopoda HOM05D004452 ORTHO05D005358 4.1e-129 465.7 461 56.0
VMungo0647G1811 Vigna mungo HOM05D004452 ORTHO05D005358 1.7e-127 460.3 461 55.3
Oeu023860.1 Olea europaea HOM05D004452 ORTHO05D005358 1.8e-124 450.3 447 53.5
Hma1.2p1_2046F.1_g312410 Hydrangea macrophylla HOM05D004452 ORTHO05D005358 2.3e-124 449.9 491 53.6
Os02g0767100 Oryza sativa ssp. japonica HOM05D004452 ORTHO05D005358 1.5e-123 447.2 464 54.7
SHI08268 Sapria himalayana HOM05D004452 ORTHO05D005358 4.9e-122 442.2 469 53.1
CDE04G2017 Ceratophyllum demersum HOM05D004452 ORTHO05D005358 2.4e-121 439.9 408 56.4
Zm00001eb255990 Zea mays HOM05D004452 ORTHO05D005358 1.7e-119 433.7 459 52.9
Mapoly0012s0112 Marchantia polymorpha HOM05D004452 ORTHO05D005358 3.6e-109 399.4 463 49.7
MSTRG.25087 Avicennia marina HOM05D004452 ORTHO05D005358 1.4e-108 397.5 399 53.9
Sed0026470 Sechium edule HOM05D004452 ORTHO05D005358 9.9e-107 391.3 464 47.4
AagrBONN_evm.TU.Sc2ySwM_228.4151 Anthoceros agrestis HOM05D004452 ORTHO05D005358 6.2e-93 345.5 444 44.1
unitig_26.g10021 Utricularia gibba HOM05D002518 ORTHO05D002630 2.0e-91 340.5 454 44.3
Nn7g37344 Nelumbo nucifera HOM05D004452 ORTHO05D005358 2.3e-87 327.0 296 59.5
unitig_749.g13678 Utricularia gibba HOM05D004452 ORTHO05D005358 9.0e-84 315.1 425 42.6
Pp3c7_25670 Physcomitrium patens HOM05D004452 ORTHO05D005358 1.5e-83 314.3 457 41.1
SalBow8G0374 Salvia bowleyana HOM05D004452 ORTHO05D005358 2.9e-82 310.1 316 55.4
SalBow8G3632 Salvia bowleyana HOM05D004452 ORTHO05D005358 2.9e-82 310.1 316 55.4
AagrBONN_evm.TU.Sc2ySwM_117.2784 Anthoceros agrestis HOM05D004452 ORTHO05D005358 5.6e-78 295.8 441 39.9
SMO356G0003 Selaginella moellendorffii HOM05D004452 ORTHO05D005358 9.6e-78 295.0 373 45.0
SEGI_30975 Sequoiadendron giganteum HOM05D004452 ORTHO05D005358 5.8e-75 285.8 311 51.4
TAR625G1031 Trochodendron aralioides HOM05D004452 ORTHO05D005358 1.7e-74 284.3 262 59.9
HPP92_016717 Vanilla planifolia HOM05D004452 ORTHO05D005358 9.7e-70 268.5 401 39.7
MD08G1099200 Malus domestica HOM05D004452 ORTHO05D005358 1.6e-64 251.1 196 67.3
Nn3g17073 Nelumbo nucifera HOM05D004452 ORTHO05D005358 2.7e-64 250.4 231 61.0
Potri.002G125300 Populus trichocarpa HOM05D004452 ORTHO05D005358 7.2e-57 225.7 315 46.7
Sopen04g032430 Solanum pennellii HOM05D004452 ORTHO05D005358 2.8e-53 213.8 234 50.0
AUR62038817 Chenopodium quinoa HOM05D004452 ORTHO05D005358 1.1e-49 201.8 188 53.2
CBR_g24409 Chara braunii HOM05D004452 ORTHO05D005358 1.1e-44 185.3 359 34.3
SalBow8G2832 Salvia bowleyana HOM05D004452 ORTHO05D005358 3.1e-44 183.7 143 61.5
SalBow8G5418 Salvia bowleyana HOM05D004452 ORTHO05D005358 3.1e-44 183.7 143 61.5
MCO13G423 Micromonas commoda HOM05D004452 ORTHO05D005358 2.6e-43 180.6 448 31.5
MD08G1099300 Malus domestica HOM05D004452 ORTHO05D005358 1.0e-39 168.7 146 59.6
Cre17.g705550 Chlamydomonas reinhardtii HOM05D004452 ORTHO05D005358 3.8e-34 150.2 367 31.3
Aa31LG7G10550 Aethionema arabicum HOM05D004452 ORTHO05D005358 3.4e-30 137.1 92 69.6
Aa31LG7G10540 Aethionema arabicum HOM05D004452 ORTHO05D005358 2.6e-22 110.9 98 67.3
CARHR174670 Cardamine hirsuta HOM05D004452 ORTHO05D005358 9.8e-14 82.4 58 67.2
Actinidia22636 Actinidia chinensis HOM05D004452 ORTHO05D005358 2.0e-06 58.2 57 56.1


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