Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G36050 Arabidopsis lyrata HOM05D002874 ORTHO05D003250 5.4e-31 137.1 74 100.0
CARHR022860 Cardamine hirsuta HOM05D002874 ORTHO05D003250 1.2e-30 136.0 74 97.3
Carub.0001s2204 Capsella rubella HOM05D002874 ORTHO05D003250 6.0e-30 133.7 74 95.9
AT1G22510 Arabidopsis thaliana HOM05D002874 ORTHO05D003250 1.3e-29 132.5 74 97.3
THA.LOC104800136 Tarenaya hassleriana HOM05D002874 ORTHO05D003250 1.3e-29 132.5 74 89.2
AT1G72175 Arabidopsis thaliana HOM05D002874 ORTHO05D003250 2.3e-29 131.7 74 93.2
A07p38290 Brassica napus HOM05D002874 ORTHO05D003250 3.0e-29 131.3 74 91.9
BraA07t31393Z Brassica rapa HOM05D002874 ORTHO05D003250 3.0e-29 131.3 74 91.9
Thhalv10019196m.g Eutrema salsugineum HOM05D002874 ORTHO05D003250 3.0e-29 131.3 74 91.9
BcaB05g24721 Brassica carinata HOM05D002874 ORTHO05D003250 5.1e-29 130.6 74 91.9
Thhalv10008870m.g Eutrema salsugineum HOM05D002874 ORTHO05D003250 5.1e-29 130.6 73 95.9
Aa31LG4G8390 Aethionema arabicum HOM05D002874 ORTHO05D003250 6.6e-29 130.2 74 91.9
CARHR065030 Cardamine hirsuta HOM05D002874 ORTHO05D003250 8.7e-29 129.8 74 90.5
Sp5g27260 Schrenkiella parvula HOM05D002874 ORTHO05D003250 8.7e-29 129.8 74 90.5
BolC6t39680H Brassica oleracea HOM05D002874 ORTHO05D003250 1.5e-28 129.0 74 90.5
THA.LOC104809729 Tarenaya hassleriana HOM05D002874 ORTHO05D003250 1.5e-28 129.0 74 86.5
AL2G31840 Arabidopsis lyrata HOM05D002874 ORTHO05D003250 2.5e-28 128.3 74 91.9
BcaC08g46664 Brassica carinata HOM05D002874 ORTHO05D003250 7.3e-28 126.7 74 89.2
C06p46350 Brassica napus HOM05D002874 ORTHO05D003250 7.3e-28 126.7 74 89.2
BcaB03g14199 Brassica carinata HOM05D002874 ORTHO05D003250 9.6e-28 126.3 73 90.4
arahy.Tifrunner.gnm1.ann1.3TL6MN Arachis hypogaea HOM05D002874 ORTHO05D003250 2.8e-27 124.8 72 87.5
arahy.Tifrunner.gnm1.ann1.ULYQ5U Arachis hypogaea HOM05D002874 ORTHO05D003250 2.8e-27 124.8 72 87.5
Manes.18G106200 Manihot esculenta HOM05D002874 ORTHO05D003250 3.6e-27 124.4 74 82.4
Potri.013G105400 Populus trichocarpa HOM05D002874 ORTHO05D003250 6.2e-27 123.6 74 79.7
Cpa.g.sc66.5 Carica papaya HOM05D002874 ORTHO05D003250 8.1e-27 123.2 73 80.8
TWI59G0939 Tripterygium wilfordii HOM05D002874 ORTHO05D003250 8.1e-27 123.2 73 79.5
Carub.0002s1898 Capsella rubella HOM05D002874 ORTHO05D003250 1.4e-26 122.5 74 85.1
Potri.019G078800 Populus trichocarpa HOM05D002874 ORTHO05D003250 1.4e-26 122.5 74 79.7
Sabra19G0089700 Salix brachista HOM05D002874 ORTHO05D003250 2.4e-26 121.7 74 79.7
Cfa012972 Carpinus fangiana HOM05D002874 ORTHO05D003250 6.9e-26 120.2 74 81.1
Lalb_Chr15g0080121 Lupinus albus HOM05D002874 ORTHO05D003250 6.9e-26 120.2 72 83.3
CSS0020391 Camellia sinensis var. sinensis HOM05D002874 ORTHO05D003250 9.0e-26 119.8 74 81.1
CiPaw.07G235400 Carya illinoinensis HOM05D002874 ORTHO05D003250 9.0e-26 119.8 74 79.7
CiPaw.08G003100 Carya illinoinensis HOM05D002874 ORTHO05D003250 1.2e-25 119.4 74 79.7
CSS0018795 Camellia sinensis var. sinensis HOM05D002874 ORTHO05D003250 1.5e-25 119.0 74 81.1
Nitab4.5_0005616g0060 Nicotiana tabacum HOM05D002874 ORTHO05D003250 4.4e-25 117.5 74 79.7
Ciclev10002598m.g Citrus clementina HOM05D002874 ORTHO05D003250 1.3e-24 115.9 74 78.4
PGR083G2530 Punica granatum HOM05D002874 ORTHO05D003250 1.3e-24 115.9 74 77.0
Lj3g0022874 Lotus japonicus HOM05D002874 ORTHO05D003250 1.7e-24 115.5 73 82.2
Cc10_g09520 Coffea canephora HOM05D002874 ORTHO05D003250 2.2e-24 115.2 74 78.4
BcaC06g34971 Brassica carinata HOM05D002874 ORTHO05D003250 4.9e-24 114.0 73 82.2
A07p14340 Brassica napus HOM05D002874 ORTHO05D003250 4.9e-24 114.0 73 82.2
C07p21110 Brassica napus HOM05D002874 ORTHO05D003250 4.9e-24 114.0 73 82.2
BolC7t42639H Brassica oleracea HOM05D002874 ORTHO05D003250 4.9e-24 114.0 73 82.2
Gohir.A05G251600 Gossypium hirsutum HOM05D002874 ORTHO05D003250 4.9e-24 114.0 72 80.6
Solyc11g027810.3 Solanum lycopersicum HOM05D002874 ORTHO05D003250 4.9e-24 114.0 74 77.0
Migut.C01326 Erythranthe guttata HOM05D002874 ORTHO05D003250 6.4e-24 113.6 74 77.0
Gohir.D05G252200 Gossypium hirsutum HOM05D002874 ORTHO05D003250 6.4e-24 113.6 72 79.2
Gorai.009G265000 Gossypium raimondii HOM05D002874 ORTHO05D003250 6.4e-24 113.6 72 79.2
Hma1.2p1_0004F.1_g004110 Hydrangea macrophylla HOM05D002874 ORTHO05D003250 6.4e-24 113.6 72 77.8
Rhsim12G0006100 Rhododendron simsii HOM05D002874 ORTHO05D003250 6.4e-24 113.6 74 74.3
CAN.G2.32 Capsicum annuum HOM05D002874 ORTHO05D003250 8.4e-24 113.2 74 75.7
Atru.chr13.2374 Acer truncatum HOM05D002874 ORTHO05D003250 1.1e-23 112.8 73 74.0
CANSAT56G0379 Cannabis sativa HOM05D002874 ORTHO05D003250 1.1e-23 112.8 73 71.2
CANSAT56G0446 Cannabis sativa HOM05D002874 ORTHO05D003250 1.1e-23 112.8 73 71.2
Nn1g08358 Nelumbo nucifera HOM05D002874 ORTHO05D003250 1.9e-23 112.1 74 78.4
PGSC0003DMG400026730 Solanum tuberosum HOM05D002874 ORTHO05D003250 1.9e-23 112.1 74 74.3
Sc01g0002000 Simmondsia chinensis HOM05D002874 ORTHO05D003250 4.2e-23 110.9 74 71.6
TPR.G25522 Trifolium pratense HOM05D002874 ORTHO05D003250 1.2e-22 109.4 73 78.1
Medtr3g005800 Medicago truncatula HOM05D002874 ORTHO05D003250 1.6e-22 109.0 73 78.1
BcaB03g14961 Brassica carinata HOM05D002874 ORTHO05D003250 2.1e-22 108.6 74 82.4
Sabra13G0091100 Salix brachista HOM05D002874 ORTHO05D003250 2.1e-22 108.6 90 63.3
TAR628G0883 Trochodendron aralioides HOM05D002874 ORTHO05D003250 2.1e-22 108.6 74 73.0
GSVIVG01026089001 Vitis vinifera HOM05D002874 ORTHO05D003250 2.1e-22 108.6 72 70.8
Psat1g008160 Pisum sativum HOM05D002874 ORTHO05D003250 2.7e-22 108.2 73 76.7
Nitab4.5_0001463g0040 Nicotiana tabacum HOM05D002874 ORTHO05D003250 7.8e-22 106.7 74 75.7
Oeu059197.1 Olea europaea HOM05D002874 ORTHO05D003250 1.0e-21 106.3 71 71.8
Hund16773 Selenicereus undatus HOM05D002874 ORTHO05D003250 1.0e-21 106.3 74 73.0
Eucgr.F04113 Eucalyptus grandis HOM05D002874 ORTHO05D003250 1.3e-21 105.9 74 68.9
BcaC08g45227 Brassica carinata HOM05D002874 ORTHO05D003250 1.7e-21 105.5 70 72.9
VMungo1080G0651 Vigna mungo HOM05D002874 ORTHO05D003250 1.7e-21 105.5 69 72.5
Aqoxy6G00106 Aquilegia oxysepala HOM05D002874 ORTHO05D003250 2.3e-21 105.1 74 68.9
CsaV3_6G002730 Cucumis sativus L. HOM05D002874 ORTHO05D003250 3.0e-21 104.8 72 70.8
SGA_v2.0_scaffold24G10609 Striga asiatica HOM05D002874 ORTHO05D003250 3.9e-21 104.4 72 70.8
MSTRG.25476 Avicennia marina HOM05D002874 ORTHO05D003250 5.1e-21 104.0 74 70.3
PSO170G2830 Papaver somniferum HOM05D002874 ORTHO05D003250 1.1e-20 102.8 72 72.2
RcHm_v2.0_Chr7g0227111 Rosa chinensis HOM05D002874 ORTHO05D003250 1.1e-20 102.8 74 67.6
PSO782G4577 Papaver somniferum HOM05D002874 ORTHO05D003250 1.5e-20 102.4 70 74.3
FvH4_5g31590 Fragaria vesca HOM05D002874 ORTHO05D003250 1.9e-20 102.1 74 67.6
Haze_21316 Corylus avellana HOM05D002874 ORTHO05D003250 3.3e-20 101.3 115 53.0
unitig_37.g13102 Utricularia gibba HOM05D002874 ORTHO05D003250 3.3e-20 101.3 72 63.9
Glyma.04G255000 Glycine max HOM05D002874 ORTHO05D003250 4.3e-20 100.9 73 72.6
ATR0709G075 Amborella trichopoda HOM05D002874 ORTHO05D003250 9.6e-20 99.8 73 63.0
MSTRG.1570 Avicennia marina HOM05D002874 ORTHO05D003250 9.6e-20 99.8 74 66.2
Sed0010548 Sechium edule HOM05D002874 ORTHO05D003250 1.6e-19 99.0 74 66.2
HPP92_003141 Vanilla planifolia HOM05D002874 ORTHO05D003250 1.6e-19 99.0 72 65.3
HanXRQChr02g0036891 Helianthus annuus HOM05D002874 ORTHO05D003250 2.1e-19 98.6 73 65.8
ECA247G4052 Erigeron canadensis HOM05D002874 ORTHO05D003250 8.1e-19 96.7 73 64.4
FAN08G3034 Fragaria x ananassa HOM05D002874 ORTHO05D003250 1.1e-18 96.3 74 66.2
DCAR_017446 Daucus carota HOM05D002874 ORTHO05D003250 1.4e-18 95.9 57 87.7
MD15G1405300 Malus domestica HOM05D002874 ORTHO05D003250 2.4e-18 95.1 74 64.9
SEGI_08350 Sequoiadendron giganteum HOM05D002874 ORTHO05D003250 2.4e-18 95.1 72 62.5
vmacro00978 Vaccinium macrocarpon HOM05D002874 ORTHO05D003250 2.4e-18 95.1 62 75.8
FAN07G2383 Fragaria x ananassa HOM05D002874 ORTHO05D003250 3.1e-18 94.7 74 64.9
HanXRQChr04g0101991 Helianthus annuus HOM05D002874 ORTHO05D003250 3.1e-18 94.7 73 61.6
MBI17_g21478_MAGBIO Magnolia biondii HOM05D002874 ORTHO05D003250 5.3e-18 94.0 71 62.0
MD08G1217700 Malus domestica HOM05D002874 ORTHO05D003250 5.3e-18 94.0 74 63.5
Os03g0839000 Oryza sativa ssp. japonica HOM05D002874 ORTHO05D003250 6.9e-18 93.6 72 62.5
FAN18G1812 Fragaria x ananassa HOM05D002874 ORTHO05D003250 9.0e-18 93.2 73 64.4
COL.COLO4_24649 Corchorus olitorius HOM05D002874 ORTHO05D003250 1.2e-17 92.8 55 81.8
BcaB02g07327 Brassica carinata HOM05D002874 ORTHO05D003250 1.5e-17 92.4 72 63.9
Duzib116G0473 Durio zibethinus HOM05D002874 ORTHO05D003250 3.4e-17 91.3 57 77.2
Duzib211G0598 Durio zibethinus HOM05D002874 ORTHO05D003250 4.5e-17 90.9 55 78.2
Thecc.08G192600 Theobroma cacao HOM05D002874 ORTHO05D003250 5.8e-17 90.5 57 77.2
Haze_21322 Corylus avellana HOM05D002874 ORTHO05D003250 1.3e-16 89.4 58 75.9
Haze_21319 Corylus avellana HOM05D002874 ORTHO05D003250 8.4e-16 86.7 56 75.0
Ah.05g178590 Amaranthus hybridus HOM05D002874 ORTHO05D003250 7.1e-15 83.6 56 69.6
AUR62023545 Chenopodium quinoa HOM05D002874 ORTHO05D003250 7.1e-15 83.6 59 67.8
Pp3c4_27320 Physcomitrium patens HOM05D002874 ORTHO05D003250 7.1e-15 83.6 72 54.2
AUR62004599 Chenopodium quinoa HOM05D002874 ORTHO05D003250 1.6e-14 82.4 59 67.8
AagrBONN_evm.TU.Sc2ySwM_362.905 Anthoceros agrestis HOM05D002874 ORTHO05D003250 3.9e-13 77.8 72 51.4
Prupe.1G555800 Prunus persica HOM05D002874 ORTHO05D003250 6.7e-13 77.0 74 48.6
Lsat_1_v5_gn_1_25761 Lactuca sativa HOM05D002874 ORTHO05D003250 1.5e-12 75.9 66 57.6
ClCG08G002480 Citrullus lanatus HOM05D002874 ORTHO05D003250 4.3e-12 74.3 52 65.4
Mapoly0062s0090 Marchantia polymorpha HOM05D002874 ORTHO05D003250 5.6e-12 73.9 72 48.6
EL10Ac1g00137 Beta vulgaris HOM05D002874 ORTHO05D003250 1.4e-10 69.3 94 43.6
SMO347G0660 Selaginella moellendorffii HOM05D002874 ORTHO05D003250 1.7e-08 62.4 71 42.3
CBR_g38544 Chara braunii HOM05D002874 ORTHO05D003250 5.5e-07 57.4 66 45.5
BcaC08g45229 Brassica carinata HOM05D002874 ORTHO05D003250 7.9e-06 53.5 32 78.1


User provided reference genes

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