Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G13040 Arabidopsis lyrata HOM05D004586 ORTHO05D005266 0.0e+00 1184.5 805 100.0
AT1G03530 Arabidopsis thaliana HOM05D004586 ORTHO05D005266 4.3e-283 978.0 821 83.3
Carub.0001s0267 Capsella rubella HOM05D004586 ORTHO05D005266 1.7e-266 922.9 794 78.8
CARHR002890 Cardamine hirsuta HOM05D004586 ORTHO05D005266 3.7e-234 815.5 822 70.8
Thhalv10006867m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 2.8e-229 799.3 816 71.8
BcaB02g06919 Brassica carinata HOM05D004586 ORTHO05D005266 2.8e-213 746.1 795 68.9
Sp1g02460 Schrenkiella parvula HOM05D004586 ORTHO05D005266 7.8e-200 701.4 499 83.6
C05p01990 Brassica napus HOM05D004586 ORTHO05D005266 4.6e-184 649.0 698 63.8
BcaC05g24523 Brassica carinata HOM05D004586 ORTHO05D005266 1.5e-179 634.0 705 63.4
BolC5t28977H Brassica oleracea HOM05D004586 ORTHO05D005266 1.5e-179 634.0 705 63.4
C08p00660 Brassica napus HOM05D004586 ORTHO05D005266 9.3e-177 624.8 718 54.7
BraA10t42477Z Brassica rapa HOM05D000330 ORTHO05D000209 5.3e-172 609.0 682 60.4
A10p02080 Brassica napus HOM05D000330 ORTHO05D005266 3.0e-167 593.2 688 60.6
BraA08t35631Z Brassica rapa HOM05D004586 ORTHO05D005266 5.7e-166 589.0 687 56.6
A08p37340 Brassica napus HOM05D004586 ORTHO05D005266 4.4e-158 562.8 404 72.3
Thhalv10024822m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 3.6e-152 543.1 623 61.2
Aa31LG1G20890 Aethionema arabicum HOM05D004586 ORTHO05D005266 6.7e-151 538.9 833 52.9
THA.LOC104826023 Tarenaya hassleriana HOM05D004586 ORTHO05D005266 5.2e-135 486.1 735 51.4
BolC8t46864H Brassica oleracea HOM05D004586 ORTHO05D005266 3.8e-85 320.5 243 70.0
Actinidia12449 Actinidia chinensis HOM05D004586 ORTHO05D005266 4.2e-76 290.4 435 45.7
BcaB08g36102 Brassica carinata HOM05D004586 ORTHO05D005266 8.7e-74 282.7 401 59.1
Actinidia09891 Actinidia chinensis HOM05D004586 ORTHO05D005266 1.1e-73 282.3 420 47.4
CSS0039758 Camellia sinensis var. sinensis HOM05D004586 ORTHO05D005266 1.1e-73 282.3 396 45.7
Ciclev10014470m.g Citrus clementina HOM05D004586 ORTHO05D005266 2.5e-73 281.2 406 49.5
RcHm_v2.0_Chr2g0162091 Rosa chinensis HOM05D004586 ORTHO05D005266 9.6e-73 279.3 396 47.2
Potri.013G145300 Populus trichocarpa HOM05D004586 ORTHO05D005266 1.6e-72 278.5 425 47.5
Sabra13G0117000 Salix brachista HOM05D004586 ORTHO05D005266 2.8e-72 277.7 432 48.8
Manes.12G079600 Manihot esculenta HOM05D004586 ORTHO05D005266 4.8e-72 276.9 438 43.8
Cpa.g.sc34.112 Carica papaya HOM05D004586 ORTHO05D005266 6.2e-72 276.6 464 45.9
FAN09G2343 Fragaria x ananassa HOM05D004586 ORTHO05D005266 6.2e-72 276.6 413 46.5
Atru.chr6.3049 Acer truncatum HOM05D004586 ORTHO05D005266 8.1e-72 276.2 441 46.9
TAR627G0949 Trochodendron aralioides HOM05D004586 ORTHO05D005266 3.1e-71 274.2 433 45.3
Haze_13103 Corylus avellana HOM05D004586 ORTHO05D005266 4.0e-71 273.9 439 48.7
Nitab4.5_0009520g0030 Nicotiana tabacum HOM05D004586 ORTHO05D005266 6.9e-71 273.1 429 44.8
SGA_v2.0_scaffold49G18309 Striga asiatica HOM05D004586 ORTHO05D005266 9.0e-71 272.7 357 48.7
FvH4_6g44910 Fragaria vesca HOM05D004586 ORTHO05D005266 2.0e-70 271.6 413 46.0
TWI36G0730 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 2.0e-70 271.6 441 44.9
FAN14G4866 Fragaria x ananassa HOM05D004586 ORTHO05D005266 3.4e-70 270.8 410 46.1
SalBow1G4799 Salvia bowleyana HOM05D004586 ORTHO05D005266 5.8e-70 270.0 380 48.4
SalBow7G1236 Salvia bowleyana HOM05D004586 ORTHO05D005266 5.8e-70 270.0 380 48.4
Duzib106G1111 Durio zibethinus HOM05D004586 ORTHO05D005266 3.8e-69 267.3 458 42.6
FAN05G3704 Fragaria x ananassa HOM05D004586 ORTHO05D005266 4.9e-69 266.9 404 46.3
Duzib052G0504 Durio zibethinus HOM05D004586 ORTHO05D005266 6.4e-69 266.5 430 46.7
Potri.019G104400 Populus trichocarpa HOM05D004586 ORTHO05D005266 6.4e-69 266.5 383 47.3
Hma1.2p1_0875F.1_g231553 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 1.1e-68 265.8 382 47.1
Hma1.2p1_0875F.1_g231580 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 1.1e-68 265.8 382 47.1
MD09G1092000 Malus domestica HOM05D004586 ORTHO05D005266 1.1e-68 265.8 419 44.6
Nitab4.5_0003018g0070 Nicotiana tabacum HOM05D004586 ORTHO05D005266 1.1e-68 265.8 394 47.2
SGA_v2.0_scaffold159G37633 Striga asiatica HOM05D004586 ORTHO05D005266 1.1e-68 265.8 406 46.8
MD17G1081900 Malus domestica HOM05D004586 ORTHO05D005266 2.5e-68 264.6 423 46.1
PGR042G3101 Punica granatum HOM05D004586 ORTHO05D005266 3.2e-68 264.2 446 42.8
Prupe.3G233000 Prunus persica HOM05D004586 ORTHO05D005266 4.2e-68 263.8 424 44.6
Eucgr.B03848 Eucalyptus grandis HOM05D004586 ORTHO05D005266 7.1e-68 263.1 442 47.7
FAN02G1766 Fragaria x ananassa HOM05D004586 ORTHO05D005266 7.1e-68 263.1 421 46.8
GSVIVG01030569001 Vitis vinifera HOM05D004586 ORTHO05D005266 9.3e-68 262.7 399 46.4
Cfa014556 Carpinus fangiana HOM05D004586 ORTHO05D005266 1.2e-67 262.3 426 48.8
Peaxi162Scf00007g02845 Petunia axillaris HOM05D004586 ORTHO05D005266 2.1e-67 261.5 398 44.2
COL.COLO4_13701 Corchorus olitorius HOM05D004586 ORTHO05D005266 7.9e-67 259.6 365 47.9
Oeu025511.1 Olea europaea HOM05D004586 ORTHO05D005266 1.0e-66 259.2 396 45.5
Thecc.02G173500 Theobroma cacao HOM05D004586 ORTHO05D005266 1.0e-66 259.2 436 44.5
CANSAT64G2104 Cannabis sativa HOM05D004586 ORTHO05D005266 1.3e-66 258.8 449 47.4
Gohir.D13G149100 Gossypium hirsutum HOM05D004586 ORTHO05D005266 3.0e-66 257.7 456 45.8
Gorai.013G166800 Gossypium raimondii HOM05D004586 ORTHO05D005266 3.9e-66 257.3 455 45.9
Lsat_1_v5_gn_4_68860 Lactuca sativa HOM05D004586 ORTHO05D005266 3.9e-66 257.3 330 49.4
Solyc07g054460.4 Solanum lycopersicum HOM05D004586 ORTHO05D005266 8.7e-66 256.1 402 44.5
Lj1C734T7 Lonicera japonica HOM05D004586 ORTHO05D005266 1.5e-65 255.4 285 52.3
HanXRQChr05g0140481 Helianthus annuus HOM05D004586 ORTHO05D005266 2.5e-65 254.6 381 45.1
Lalb_Chr01g0005391 Lupinus albus HOM05D004586 ORTHO05D005266 3.3e-65 254.2 409 45.0
VMungo1127G2109 Vigna mungo HOM05D004586 ORTHO05D005266 3.3e-65 254.2 393 44.8
CiPaw.03G171000 Carya illinoinensis HOM05D004586 ORTHO05D005266 1.6e-64 251.9 380 45.8
MSTRG.14187 Avicennia marina HOM05D004586 ORTHO05D005266 2.1e-64 251.5 417 42.4
vmacro12267 Vaccinium macrocarpon HOM05D004586 ORTHO05D005266 2.8e-64 251.1 434 41.7
HanXRQChr14g0441421 Helianthus annuus HOM05D004586 ORTHO05D005266 3.7e-64 250.8 254 53.1
Gohir.A13G144300 Gossypium hirsutum HOM05D004586 ORTHO05D005266 4.8e-64 250.4 450 45.3
Rhsim06G0149700 Rhododendron simsii HOM05D004586 ORTHO05D005266 6.2e-64 250.0 378 44.2
PGSC0003DMG400018364 Solanum tuberosum HOM05D004586 ORTHO05D005266 6.2e-64 250.0 397 44.1
Sopen07g028400 Solanum pennellii HOM05D004586 ORTHO05D005266 1.1e-63 249.2 400 44.8
Lj3g0023901 Lotus japonicus HOM05D004586 ORTHO05D005266 2.4e-63 248.1 391 43.2
CAN.G78.83 Capsicum annuum HOM05D004586 ORTHO05D005266 5.3e-63 246.9 387 43.7
QL10p048480 Quercus lobata HOM05D004586 ORTHO05D005266 6.9e-63 246.5 389 43.4
arahy.Tifrunner.gnm1.ann1.FC6AAX Arachis hypogaea HOM05D004586 ORTHO05D005266 1.2e-62 245.7 361 44.6
ECA234G1777 Erigeron canadensis HOM05D004586 ORTHO05D005266 2.0e-62 245.0 445 40.2
PSO675G0516 Papaver somniferum HOM05D004586 ORTHO05D005266 2.0e-62 245.0 299 48.8
TPR.G21660 Trifolium pratense HOM05D004586 ORTHO05D005266 3.4e-62 244.2 208 64.4
PSO541G0834 Papaver somniferum HOM05D004586 ORTHO05D005266 4.5e-62 243.8 299 48.2
Migut.H01030 Erythranthe guttata HOM05D004586 ORTHO05D005266 3.8e-61 240.7 417 43.9
TWI18G0514 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 8.4e-61 239.6 272 51.1
MBI02_g10548_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 1.1e-60 239.2 242 55.0
Sc12g0002770 Simmondsia chinensis HOM05D004586 ORTHO05D005266 1.9e-60 238.4 266 58.3
AUR62035735 Chenopodium quinoa HOM05D004586 ORTHO05D005266 3.2e-60 237.7 402 42.8
EL10As5g23555 Beta vulgaris HOM05D004586 ORTHO05D005266 5.5e-60 236.9 170 69.4
arahy.Tifrunner.gnm1.ann1.SANC69 Arachis hypogaea HOM05D004586 ORTHO05D005266 1.6e-59 235.3 347 44.1
CsaV3_2G036510 Cucumis sativus L. HOM05D004586 ORTHO05D005266 1.6e-59 235.3 377 44.8
Sed0007770 Sechium edule HOM05D004586 ORTHO05D005266 2.1e-59 235.0 432 42.6
unitig_26.g9937 Utricularia gibba HOM05D004586 ORTHO05D005266 2.1e-59 235.0 219 56.6
COL.COLO4_08510 Corchorus olitorius HOM05D004586 ORTHO05D005266 2.7e-59 234.6 193 65.3
Phvul.011G112400 Phaseolus vulgaris HOM05D004586 ORTHO05D005266 7.9e-59 233.0 376 42.8
ClCG02G017410 Citrullus lanatus HOM05D004586 ORTHO05D005266 1.0e-58 232.6 435 41.1
Psat0s4261g0040 Pisum sativum HOM05D004586 ORTHO05D005266 1.3e-58 232.3 200 62.0
Medtr0072s0050 Medicago truncatula HOM05D004586 ORTHO05D005266 1.8e-58 231.9 384 43.5
MELO3C003861.2 Cucumis melo HOM05D004586 ORTHO05D005266 3.0e-58 231.1 362 44.8
Glyma.06G297000 Glycine max HOM05D004586 ORTHO05D005266 6.7e-58 229.9 393 42.0
ATR0693G407 Amborella trichopoda HOM05D004586 ORTHO05D005266 1.5e-57 228.8 182 63.7
MELO3C021880.2 Cucumis melo HOM05D004586 ORTHO05D005266 1.9e-57 228.4 337 46.9
PSO384G2677 Papaver somniferum HOM05D004586 ORTHO05D005266 1.9e-57 228.4 251 52.2
Ca_27565_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 3.3e-57 227.6 349 44.1
Peaxi162Scf00485g00032 Petunia axillaris HOM05D004586 ORTHO05D005266 4.3e-57 227.3 473 39.3
CAN.G996.7 Capsicum annuum HOM05D004586 ORTHO05D005266 7.4e-57 226.5 395 42.3
Ca_20687_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 9.7e-57 226.1 389 42.4
Glyma.12G108100 Glycine max HOM05D004586 ORTHO05D005266 6.3e-56 223.4 368 42.7
TAR629G0893 Trochodendron aralioides HOM05D004586 ORTHO05D005266 9.0e-55 219.5 429 39.9
SHI10466 Sapria himalayana HOM05D004586 ORTHO05D005266 1.5e-54 218.8 383 41.3
CDE02G0135 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 1.0e-53 216.1 326 44.8
Hund09647 Selenicereus undatus HOM05D004586 ORTHO05D005266 1.9e-52 211.8 384 39.8
AUR62000198 Chenopodium quinoa HOM05D004586 ORTHO05D005266 3.2e-52 211.1 351 41.3
Cc00_g21120 Coffea canephora HOM05D004586 ORTHO05D005266 3.2e-52 211.1 379 42.7
Os05g0502800 Oryza sativa ssp. japonica HOM05D004586 ORTHO05D005266 1.2e-51 209.1 446 37.7
Nn1g03938 Nelumbo nucifera HOM05D004586 ORTHO05D005266 6.7e-50 203.4 169 60.4
Lj3g0000702 Lotus japonicus HOM05D004586 ORTHO05D005266 3.3e-49 201.1 334 47.6
SEGI_15076 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 7.4e-49 199.9 182 55.5
HPP92_014062 Vanilla planifolia HOM05D004586 ORTHO05D005266 1.3e-48 199.1 350 40.9
Ah.01g003940 Amaranthus hybridus HOM05D004586 ORTHO05D005266 2.8e-48 198.0 391 40.2
Medtr2g090095 Medicago truncatula HOM05D004586 ORTHO05D005266 8.2e-48 196.4 229 48.5
Nitab4.5_0007732g0010 Nicotiana tabacum HOM05D004586 ORTHO05D005266 1.1e-47 196.1 182 56.6
DCAR_019194 Daucus carota HOM05D004586 ORTHO05D005266 5.3e-47 193.7 311 45.7
BcaB01g00913 Brassica carinata HOM05D004586 ORTHO05D005266 4.2e-44 184.1 141 77.3
Zm00001eb292050 Zea mays HOM05D004586 ORTHO05D005266 4.2e-44 184.1 304 42.4
Psat5g270160 Pisum sativum HOM05D004586 ORTHO05D005266 7.2e-44 183.3 394 37.1
arahy.Tifrunner.gnm1.ann1.IS01QF Arachis hypogaea HOM05D004586 ORTHO05D005266 4.7e-43 180.6 176 57.4
arahy.Tifrunner.gnm1.ann1.7D4Z5S Arachis hypogaea HOM05D004586 ORTHO05D005266 1.8e-42 178.7 176 57.4
Dinv15471 Davidia involucrata HOM05D004586 ORTHO05D005266 8.8e-42 176.4 383 38.6
TPR.G27075 Trifolium pratense HOM05D004586 ORTHO05D005266 3.3e-41 174.5 200 50.5
CBR_g12767 Chara braunii HOM05D004586 ORTHO05D005266 3.7e-40 171.0 252 44.0
CDE02G4059 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 1.1e-39 169.5 344 38.7
SMO137G0274 Selaginella moellendorffii HOM05D004586 ORTHO05D005266 1.3e-37 162.5 137 54.7
Lalb_Chr22g0356411 Lupinus albus HOM05D004586 ORTHO05D005266 2.2e-37 161.8 157 52.9
Pp3c14_14050 Physcomitrium patens HOM05D004586 ORTHO05D005266 2.9e-37 161.4 157 51.6
SEGI_36208 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 2.5e-36 158.3 138 58.7
Pp3c10_10230 Physcomitrium patens HOM05D004586 ORTHO05D005266 9.4e-36 156.4 156 49.4
AagrBONN_evm.TU.Sc2ySwM_117.2920 Anthoceros agrestis HOM05D004586 ORTHO05D005266 2.1e-35 155.2 252 42.9
Mapoly0108s0039 Marchantia polymorpha HOM05D004586 ORTHO05D005266 6.7e-34 150.2 172 48.3
MBI02_g27225_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 1.3e-29 136.0 422 31.3
Psat0s10217g0080 Pisum sativum HOM05D004586 ORTHO05D005266 2.1e-19 102.1 96 58.3
PSO339G0898 Papaver somniferum HOM05D004586 ORTHO05D005266 1.4e-15 89.4 105 45.7
Medtr7g116780 Medicago truncatula HOM05D004586 ORTHO05D005266 1.6e-14 85.9 71 53.5
MCO05G032 Micromonas commoda HOM05D004586 ORTHO05D005266 2.8e-11 75.1 170 32.4
Cre10.g467100 Chlamydomonas reinhardtii HOM05D004586 ORTHO05D005266 1.0e-10 73.2 149 34.9
DCAR_012988 Daucus carota HOM05D004586 ORTHO05D005266 8.9e-10 70.1 125 44.0
AL2G23840 Arabidopsis lyrata HOM05D020923 ORTHO05D021440 5.4e-07 60.8 74 44.6
BcaB08g36101 Brassica carinata HOM05D004586 ORTHO05D005266 1.2e-06 59.7 70 52.9
Carub.0006s3370 Capsella rubella HOM05D020923 ORTHO05D021440 7.8e-06 57.0 107 35.5


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