Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 0.0e+00 1114.8 584 100.0
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 0.0e+00 1083.9 588 98.0
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 3.2e-304 1047.7 588 93.2
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 4.0e-294 1014.2 589 90.0
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 2.3e-278 961.8 588 87.6
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 4.9e-252 874.4 607 78.4
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 2.5e-219 765.8 602 69.6
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 3.0e-217 758.8 604 69.4
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 1.4e-209 733.4 606 66.8
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 2.8e-207 725.7 607 66.2
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 2.2e-180 636.3 486 70.4
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 4.1e-174 615.5 592 57.6
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 1.6e-170 603.6 603 57.9
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 5.1e-140 502.3 611 46.8
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 6.0e-133 478.8 617 44.9
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 3.9e-132 476.1 597 47.4
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 6.6e-132 475.3 605 45.3
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 1.9e-131 473.8 583 46.8
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 8.1e-130 468.4 611 43.4
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 1.4e-129 467.6 607 44.3
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 6.9e-129 465.3 605 44.8
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 1.5e-128 464.2 609 43.8
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 3.4e-128 463.0 607 44.5
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 3.4e-128 463.0 605 43.3
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 6.4e-127 458.8 607 44.6
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 5.4e-126 455.7 616 44.0
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 9.3e-126 454.9 670 41.0
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 1.5e-123 447.6 609 43.3
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 2.5e-123 446.8 605 42.3
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 4.3e-123 446.0 603 43.6
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 4.3e-123 446.0 593 43.0
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 1.4e-121 441.0 604 41.7
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 5.3e-121 439.1 597 41.7
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 6.9e-121 438.7 602 42.5
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 6.9e-121 438.7 594 42.8
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.5e-120 437.6 614 43.2
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 2.0e-120 437.2 607 42.5
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 2.0e-120 437.2 607 41.8
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 4.5e-120 436.0 614 42.5
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 9.9e-120 434.9 603 42.5
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 1.7e-119 434.1 612 41.8
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 2.2e-119 433.7 631 41.2
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 2.9e-119 433.3 538 44.6
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 4.9e-119 432.6 594 42.1
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 8.4e-119 431.8 592 41.0
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.9e-118 430.6 631 41.0
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 3.2e-118 429.9 603 40.6
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 4.2e-118 429.5 631 40.9
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 5.4e-118 429.1 602 41.7
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 1.0e-116 424.9 592 41.2
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 2.3e-116 423.7 605 41.8
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 1.5e-115 421.0 584 42.5
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 1.9e-115 420.6 653 39.5
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 1.9e-115 420.6 603 41.5
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 1.3e-114 417.9 604 39.4
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 1.6e-114 417.5 611 41.7
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 2.1e-114 417.2 617 38.9
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 6.2e-114 415.6 536 44.0
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 1.1e-113 414.8 618 40.9
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 6.9e-113 412.1 670 39.1
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 2.6e-112 410.2 611 39.8
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 1.0e-111 408.3 612 39.4
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 2.2e-111 407.1 607 39.5
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 1.1e-110 404.8 578 42.4
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 4.6e-109 399.4 607 40.9
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 1.3e-106 391.3 600 39.8
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 2.1e-106 390.6 667 36.0
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 2.8e-106 390.2 542 43.0
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 2.4e-105 387.1 655 36.8
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 5.3e-105 386.0 617 39.2
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 9.0e-105 385.2 609 38.8
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 1.0e-103 381.7 631 38.8
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 1.0e-103 381.7 606 39.4
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 1.9e-102 377.5 614 40.1
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 4.6e-101 372.9 573 39.8
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 6.1e-101 372.5 581 40.4
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 2.8e-98 363.6 606 38.0
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 8.2e-98 362.1 613 36.1
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 8.2e-98 362.1 514 43.0
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.8e-97 360.9 539 39.5
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 1.8e-92 344.4 660 35.3
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 4.3e-91 339.7 614 35.5
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 7.7e-88 328.9 506 38.9
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 7.7e-88 328.9 612 34.6
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 1.8e-84 317.8 477 41.3
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 2.8e-82 310.5 423 41.1
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 4.8e-82 309.7 420 42.6
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 2.6e-80 303.9 577 34.0
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.0e-75 287.7 380 43.4
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 4.8e-74 283.1 380 42.6
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 5.3e-73 279.6 375 42.4
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 1.3e-71 275.0 396 39.6
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 5.5e-70 269.6 632 31.6
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 1.6e-69 268.1 648 30.9
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.5e-62 245.0 363 39.7
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 4.2e-62 243.4 446 34.8
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 6.1e-61 239.6 600 29.5
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 3.1e-57 227.3 565 30.3
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 9.8e-51 205.7 334 38.3
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 2.8e-45 187.6 451 31.0
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 6.2e-45 186.4 306 36.6
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 6.4e-42 176.4 265 40.8
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 3.1e-36 157.5 257 37.0
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 5.4e-33 146.7 162 49.4
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 1.3e-31 142.1 241 37.3
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 6.6e-31 139.8 560 23.9
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 3.6e-29 134.0 515 24.3
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 8.1e-29 132.9 502 25.9
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 5.8e-27 126.7 521 23.0
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 7.8e-24 116.3 155 41.9
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 9.6e-22 109.4 496 25.0
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 3.9e-15 87.4 162 35.8
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.5e-14 85.5 91 47.3
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 4.0e-12 77.4 127 38.6
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 5.3e-12 77.0 128 36.7
Medtr1g013010 Medicago truncatula HOM05D006351 ORTHO05D007796 5.1e-07 60.5 72 44.4


User provided reference genes

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