Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p26450 Brassica napus HOM05D006924 ORTHO05D008218 1.9e-172 609.4 378 100.0
BraA10t44702Z Brassica rapa HOM05D006924 ORTHO05D008218 3.4e-153 545.4 356 96.3
BcaC04g19245 Brassica carinata HOM05D006924 ORTHO05D008218 1.0e-141 507.3 361 91.7
BolC9t59383H Brassica oleracea HOM05D006924 ORTHO05D008218 1.3e-136 490.3 354 91.8
BcaB08g37076 Brassica carinata HOM05D006924 ORTHO05D008218 1.2e-129 467.2 365 87.7
Sp6g32290 Schrenkiella parvula HOM05D006924 ORTHO05D008218 3.6e-123 445.7 355 85.4
AL6G21900 Arabidopsis lyrata HOM05D006924 ORTHO05D008218 3.6e-115 419.1 359 80.5
CARHR201990 Cardamine hirsuta HOM05D006924 ORTHO05D008218 5.3e-114 415.2 351 75.2
Thhalv10013990m.g Eutrema salsugineum HOM05D006924 ORTHO05D008218 5.3e-114 415.2 356 80.3
AT5G11270 Arabidopsis thaliana HOM05D006924 ORTHO05D008218 2.2e-112 409.8 362 80.7
Carub.0006s0974 Capsella rubella HOM05D006924 ORTHO05D008218 1.4e-111 407.1 357 81.2
Aa31LG3G15920 Aethionema arabicum HOM05D006924 ORTHO05D008218 5.5e-95 352.1 354 69.2
THA.LOC104815037 Tarenaya hassleriana HOM05D006924 ORTHO05D008218 6.5e-88 328.6 354 61.6
Thecc.09G150000 Theobroma cacao HOM05D006924 ORTHO05D008218 9.7e-68 261.5 256 59.4
GSVIVG01035827001 Vitis vinifera HOM05D006924 ORTHO05D008218 1.1e-66 258.1 310 55.5
COL.COLO4_00196 Corchorus olitorius HOM05D006924 ORTHO05D008218 2.7e-65 253.4 259 65.3
Gorai.004G274200 Gossypium raimondii HOM05D006924 ORTHO05D008218 3.8e-64 249.6 265 62.3
Gohir.D08G257200 Gossypium hirsutum HOM05D006924 ORTHO05D008218 1.1e-63 248.1 265 63.0
QL02p022351 Quercus lobata HOM05D006924 ORTHO05D008218 1.5e-63 247.7 256 61.7
Cpa.g.sc115.10 Carica papaya HOM05D006924 ORTHO05D008218 2.5e-63 246.9 253 55.3
Cfa013171 Carpinus fangiana HOM05D006924 ORTHO05D008218 4.0e-61 239.6 254 62.6
TWI34G0486 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 5.2e-61 239.2 253 56.9
Manes.03G016800 Manihot esculenta HOM05D006924 ORTHO05D008218 6.8e-61 238.8 261 60.9
Ciclev10010768m.g Citrus clementina HOM05D006924 ORTHO05D008218 8.8e-61 238.4 319 56.7
Duzib187G1593 Durio zibethinus HOM05D006924 ORTHO05D008218 2.0e-60 237.3 262 56.1
Gohir.A08G236600 Gossypium hirsutum HOM05D006924 ORTHO05D008218 2.0e-60 237.3 261 63.6
Sabra06G0196700 Salix brachista HOM05D006924 ORTHO05D008218 1.3e-59 234.6 258 56.6
CSS0024674 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 1.8e-58 230.7 338 45.9
Potri.006G251700 Populus trichocarpa HOM05D006924 ORTHO05D008218 1.8e-58 230.7 258 58.1
Migut.E01789 Erythranthe guttata HOM05D006924 ORTHO05D008218 2.4e-58 230.3 263 57.8
TWI63G1089 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 3.1e-58 229.9 334 49.7
FAN27G0236 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.6e-57 227.6 260 59.6
Glyma.04G068000 Glycine max HOM05D006924 ORTHO05D008218 5.9e-57 225.7 253 53.0
Aqoxy7G02106 Aquilegia oxysepala HOM05D006924 ORTHO05D008218 2.3e-56 223.8 261 58.2
Glyma.06G069700 Glycine max HOM05D006924 ORTHO05D008218 2.3e-56 223.8 260 53.1
VMungo1309G0550 Vigna mungo HOM05D006924 ORTHO05D008218 2.9e-56 223.4 259 54.8
Cc08_g00950 Coffea canephora HOM05D006924 ORTHO05D008218 6.5e-56 222.2 270 51.9
MELO3C003685.2 Cucumis melo HOM05D006924 ORTHO05D008218 1.9e-55 220.7 249 60.2
FAN20G0173 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.9e-55 220.7 259 59.5
Lj1g0004722 Lotus japonicus HOM05D006924 ORTHO05D008218 1.9e-55 220.7 256 52.7
Lalb_Chr23g0268731 Lupinus albus HOM05D006924 ORTHO05D008218 1.9e-55 220.7 256 52.3
Nitab4.5_0009676g0020 Nicotiana tabacum HOM05D006924 ORTHO05D008218 2.5e-55 220.3 251 53.4
unitig_26.g9317 Utricularia gibba HOM05D006924 ORTHO05D008218 2.5e-55 220.3 252 53.6
FAN24G1985 Fragaria x ananassa HOM05D006924 ORTHO05D008218 3.2e-55 219.9 261 57.1
CAN.G6.23 Capsicum annuum HOM05D006924 ORTHO05D008218 1.2e-54 218.0 256 53.5
Lsat_1_v5_gn_5_30481 Lactuca sativa HOM05D006924 ORTHO05D008218 1.2e-54 218.0 282 48.6
Ca_15720_v3 Cicer arietinum L. HOM05D006924 ORTHO05D008218 1.6e-54 217.6 251 50.2
Dinv15967 Davidia involucrata HOM05D006924 ORTHO05D008218 1.6e-54 217.6 356 52.2
Dinv18229 Davidia involucrata HOM05D006924 ORTHO05D008218 1.6e-54 217.6 356 52.2
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 1.6e-54 217.6 292 48.3
Nitab4.5_0002007g0080 Nicotiana tabacum HOM05D006924 ORTHO05D008218 2.8e-54 216.9 265 52.1
MD08G1147000 Malus domestica HOM05D006924 ORTHO05D008218 6.1e-54 215.7 260 56.5
Nn8g39393 Nelumbo nucifera HOM05D006924 ORTHO05D008218 6.1e-54 215.7 252 60.3
Eucgr.C02804 Eucalyptus grandis HOM05D006924 ORTHO05D008218 8.0e-54 215.3 257 50.6
FvH4_2g29450 Fragaria vesca HOM05D006924 ORTHO05D008218 1.8e-53 214.2 261 57.9
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 3.0e-53 213.4 259 56.8
CANSAT21G2575 Cannabis sativa HOM05D006924 ORTHO05D008218 4.0e-53 213.0 254 58.3
Phvul.009G094300 Phaseolus vulgaris HOM05D006924 ORTHO05D008218 4.0e-53 213.0 258 55.4
vmacro11153 Vaccinium macrocarpon HOM05D006924 ORTHO05D008218 4.0e-53 213.0 263 56.3
CsaV3_3G046540 Cucumis sativus L. HOM05D006924 ORTHO05D008218 5.2e-53 212.6 250 60.0
Hund25749 Selenicereus undatus HOM05D006924 ORTHO05D008218 5.2e-53 212.6 348 49.4
PSO455G0271 Papaver somniferum HOM05D006924 ORTHO05D008218 6.8e-53 212.2 269 57.2
Actinidia13248 Actinidia chinensis HOM05D006924 ORTHO05D008218 2.6e-52 210.3 253 58.1
CDE04G2397 Ceratophyllum demersum HOM05D006924 ORTHO05D008218 4.4e-52 209.5 252 52.0
HanXRQChr08g0234821 Helianthus annuus HOM05D006924 ORTHO05D008218 5.7e-52 209.1 291 47.8
Sc09g0008380 Simmondsia chinensis HOM05D006924 ORTHO05D008218 5.7e-52 209.1 263 55.5
ClCG05G017060 Citrullus lanatus HOM05D006924 ORTHO05D008218 2.8e-51 206.8 266 58.3
Rhsim02G0195700 Rhododendron simsii HOM05D006924 ORTHO05D008218 2.8e-51 206.8 355 47.6
EL10Ac2g02609 Beta vulgaris HOM05D006924 ORTHO05D008218 3.7e-51 206.5 258 50.0
PSO455G0276 Papaver somniferum HOM05D006924 ORTHO05D008218 3.7e-51 206.5 268 56.0
MSTRG.1715 Avicennia marina HOM05D006924 ORTHO05D008218 8.3e-51 205.3 265 56.2
Medtr3g107530 Medicago truncatula HOM05D006924 ORTHO05D008218 8.3e-51 205.3 253 49.8
Sed0001141 Sechium edule HOM05D006924 ORTHO05D008218 8.3e-51 205.3 253 55.3
RcHm_v2.0_Chr6g0298241 Rosa chinensis HOM05D006924 ORTHO05D008218 1.1e-50 204.9 333 48.6
Psat5g028520 Pisum sativum HOM05D006924 ORTHO05D008218 1.8e-50 204.1 250 51.2
PSO170G6279 Papaver somniferum HOM05D006924 ORTHO05D008218 4.1e-50 203.0 279 54.1
Peaxi162Scf00073g01120 Petunia axillaris HOM05D006924 ORTHO05D008218 4.1e-50 203.0 249 55.8
Ah.12g064050 Amaranthus hybridus HOM05D006924 ORTHO05D008218 5.4e-50 202.6 261 54.4
Solyc08g061140.3 Solanum lycopersicum HOM05D006924 ORTHO05D008218 1.2e-49 201.4 252 51.6
arahy.Tifrunner.gnm1.ann1.SMV5T8 Arachis hypogaea HOM05D006924 ORTHO05D008218 1.6e-49 201.1 257 52.9
Zm00001eb385620 Zea mays HOM05D006924 ORTHO05D008218 1.6e-49 201.1 247 49.4
arahy.Tifrunner.gnm1.ann1.748QI4 Arachis hypogaea HOM05D006924 ORTHO05D008218 3.5e-49 199.9 254 52.0
PGSC0003DMG400020785 Solanum tuberosum HOM05D006924 ORTHO05D008218 2.9e-48 196.8 251 52.6
DCAR_001517 Daucus carota HOM05D006924 ORTHO05D008218 3.8e-48 196.4 254 53.1
Sopen08g016210 Solanum pennellii HOM05D006924 ORTHO05D008218 2.5e-47 193.7 255 50.6
FAN15G1620 Fragaria x ananassa HOM05D006924 ORTHO05D008218 7.3e-47 192.2 251 54.6
TPR.G31774 Trifolium pratense HOM05D006924 ORTHO05D008218 2.8e-46 190.3 172 55.8
Rhsim02G0198800 Rhododendron simsii HOM05D006924 ORTHO05D008218 8.0e-46 188.7 288 47.2
MBI04_g07630_MAGBIO Magnolia biondii HOM05D006924 ORTHO05D008218 1.0e-45 188.3 172 61.0
Atru.chr7.2389 Acer truncatum HOM05D006924 ORTHO05D008218 1.8e-45 187.6 338 44.1
CiPaw.08G012700 Carya illinoinensis HOM05D006924 ORTHO05D008218 5.2e-45 186.0 215 57.7
Prupe.1G478200 Prunus persica HOM05D006924 ORTHO05D008218 6.8e-45 185.7 372 46.5
ATR0564G047 Amborella trichopoda HOM05D006924 ORTHO05D008218 2.6e-44 183.7 247 47.4
C09p65600 Brassica napus HOM05D000552 ORTHO05D003270 3.4e-44 183.3 199 79.9
Os06g0601000 Oryza sativa ssp. japonica HOM05D006924 ORTHO05D008218 3.7e-43 179.9 250 48.0
AUR62024897 Chenopodium quinoa HOM05D006924 ORTHO05D008218 1.6e-41 174.5 249 45.8
PGR044G1352 Punica granatum HOM05D006924 ORTHO05D008218 1.9e-39 167.5 229 56.3
HPP92_003651 Vanilla planifolia HOM05D000347 ORTHO05D001997 5.6e-39 166.0 164 56.7
SalBow1G5089 Salvia bowleyana HOM05D006924 ORTHO05D008218 9.5e-39 165.2 146 65.1
Haze_21546 Corylus avellana HOM05D006924 ORTHO05D008218 5.2e-37 159.5 246 54.1
Lj7C719T2 Lonicera japonica HOM05D006924 ORTHO05D008218 5.0e-32 142.9 215 53.5
TAR626G1567 Trochodendron aralioides HOM05D006924 ORTHO05D008218 1.1e-31 141.7 146 55.5
CSS0004992 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 1.0e-24 118.6 117 53.8
Pp3c19_15790 Physcomitrium patens HOM05D006924 ORTHO05D008218 1.3e-24 118.2 272 40.1
Mapoly0029s0145 Marchantia polymorpha HOM05D006924 ORTHO05D008218 3.3e-23 113.6 254 36.6
Atru.chr7.2280 Acer truncatum HOM05D006924 ORTHO05D008218 1.2e-20 105.1 123 52.8
AUR62030642 Chenopodium quinoa HOM05D006924 ORTHO05D008218 1.5e-20 104.8 248 34.7
Atru.chr10.503 Acer truncatum HOM05D006924 ORTHO05D008218 7.3e-15 85.9 309 30.4
SEGI_32810 Sequoiadendron giganteum HOM05D006924 ORTHO05D008218 9.0e-13 79.0 217 33.6
SMO367G1066 Selaginella moellendorffii HOM05D024584 ORTHO05D008218 3.2e-10 70.5 100 37.0
Haze_21544 Corylus avellana HOM05D006924 ORTHO05D008218 4.2e-10 70.1 52 59.6
TPR.G28713 Trifolium pratense HOM05D006924 ORTHO05D008218 9.3e-10 68.9 39 71.8
Nn2g11969 Nelumbo nucifera HOM05D006924 ORTHO05D008218 1.7e-08 64.7 185 34.6
Atru.chr1.1063 Acer truncatum HOM05D006924 ORTHO05D008218 1.5e-07 61.6 87 51.7
AagrBONN_evm.TU.Sc2ySwM_368.1808 Anthoceros agrestis HOM05D006924 ORTHO05D008218 4.8e-06 56.6 134 32.1


User provided reference genes

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