Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p26150 Brassica napus HOM05D005944 ORTHO05D007188 5.0e-162 574.3 278 100.0
BraA10t44674Z Brassica rapa HOM05D005944 ORTHO05D007188 5.0e-162 574.3 278 100.0
BolC9t59349H Brassica oleracea HOM05D005944 ORTHO05D007188 3.6e-160 568.2 278 98.6
BcaC04g19210 Brassica carinata HOM05D005944 ORTHO05D007188 8.0e-160 567.0 278 98.2
C09p65200 Brassica napus HOM05D005944 ORTHO05D007188 8.0e-160 567.0 278 98.2
BcaB08g37038 Brassica carinata HOM05D005944 ORTHO05D007188 5.4e-140 501.1 280 89.3
Thhalv10014372m.g Eutrema salsugineum HOM05D005944 ORTHO05D007188 4.4e-126 454.9 280 83.6
Sp6g32000 Schrenkiella parvula HOM05D005944 ORTHO05D007188 4.4e-126 454.9 279 83.5
Carub.0006s1010 Capsella rubella HOM05D005944 ORTHO05D007188 1.2e-120 436.8 280 78.2
AL6G22330 Arabidopsis lyrata HOM05D005944 ORTHO05D007188 6.4e-117 424.5 279 77.4
CARHR201600 Cardamine hirsuta HOM05D005944 ORTHO05D007188 7.1e-116 421.0 280 77.1
AT5G11620 Arabidopsis thaliana HOM05D005944 ORTHO05D007188 2.7e-115 419.1 280 77.1
Aa31LG3G15570 Aethionema arabicum HOM05D005944 ORTHO05D007188 7.3e-97 357.8 289 65.7
THA.LOC104799702 Tarenaya hassleriana HOM05D005944 ORTHO05D007188 1.1e-87 327.4 282 62.8
Potri.006G238000 Populus trichocarpa HOM05D005944 ORTHO05D007188 3.0e-58 229.6 277 48.4
QL12p041319 Quercus lobata HOM05D005944 ORTHO05D007188 5.1e-58 228.8 269 48.0
Manes.16G075200 Manihot esculenta HOM05D005944 ORTHO05D007188 3.3e-57 226.1 266 49.6
Cpa.g.sc78.4 Carica papaya HOM05D005944 ORTHO05D007188 1.1e-55 221.1 275 47.6
CANSAT25G1052 Cannabis sativa HOM05D005944 ORTHO05D007188 7.0e-55 218.4 274 45.6
VMungo1309G1803 Vigna mungo HOM05D005944 ORTHO05D007188 9.1e-55 218.0 239 49.0
Nn8g39119 Nelumbo nucifera HOM05D005944 ORTHO05D007188 2.0e-54 216.9 277 43.7
CiPaw.08G026000 Carya illinoinensis HOM05D005944 ORTHO05D007188 2.6e-54 216.5 268 46.3
MBI01_g42891_MAGBIO Magnolia biondii HOM05D005944 ORTHO05D007188 2.6e-54 216.5 250 47.6
TPR.G15103 Trifolium pratense HOM05D005944 ORTHO05D007188 3.5e-54 216.1 240 47.5
Cfa013369 Carpinus fangiana HOM05D005944 ORTHO05D007188 5.9e-54 215.3 269 47.6
PGR031G3052 Punica granatum HOM05D005944 ORTHO05D007188 5.9e-54 215.3 280 45.4
Eucgr.C00599 Eucalyptus grandis HOM05D005944 ORTHO05D007188 7.7e-54 214.9 272 43.8
MD08G1113400 Malus domestica HOM05D005944 ORTHO05D007188 1.0e-53 214.5 277 44.0
Phvul.009G110100 Phaseolus vulgaris HOM05D005944 ORTHO05D007188 1.0e-53 214.5 239 47.7
Psat5g021160 Pisum sativum HOM05D005944 ORTHO05D007188 1.3e-53 214.2 269 43.9
Prupe.1G447700 Prunus persica HOM05D005944 ORTHO05D007188 1.3e-53 214.2 269 44.2
TAR626G0255 Trochodendron aralioides HOM05D005944 ORTHO05D007188 1.7e-53 213.8 272 46.0
Glyma.06G086100 Glycine max HOM05D005944 ORTHO05D007188 2.9e-53 213.0 239 48.1
Haze_21893 Corylus avellana HOM05D005944 ORTHO05D007188 6.5e-53 211.8 269 46.8
Lalb_Chr11g0064511 Lupinus albus HOM05D005944 ORTHO05D007188 1.1e-52 211.1 266 45.9
Ca_15588_v3 Cicer arietinum L. HOM05D005944 ORTHO05D007188 1.4e-52 210.7 267 42.3
Sc09g0009310 Simmondsia chinensis HOM05D005944 ORTHO05D007188 1.9e-52 210.3 276 45.3
Duzib168G0738 Durio zibethinus HOM05D005944 ORTHO05D007188 2.5e-52 209.9 252 44.8
Sabra06G0186300 Salix brachista HOM05D005944 ORTHO05D007188 3.2e-52 209.5 279 45.9
Oeu031102.1 Olea europaea HOM05D005944 ORTHO05D007188 7.2e-52 208.4 266 46.6
Thecc.09G045700 Theobroma cacao HOM05D005944 ORTHO05D007188 1.2e-51 207.6 232 47.4
MSTRG.11696 Avicennia marina HOM05D005944 ORTHO05D007188 1.6e-51 207.2 271 45.8
Hma1.2p1_0049F.1_g028530 Hydrangea macrophylla HOM05D005944 ORTHO05D007188 1.6e-51 207.2 266 44.7
CiPaw.07G203800 Carya illinoinensis HOM05D005944 ORTHO05D007188 2.1e-51 206.8 275 44.0
Ciclev10009275m.g Citrus clementina HOM05D005944 ORTHO05D007188 2.1e-51 206.8 271 45.4
COL.COLO4_20974 Corchorus olitorius HOM05D005944 ORTHO05D007188 2.7e-51 206.5 244 45.1
Lj1g0013558 Lotus japonicus HOM05D005944 ORTHO05D007188 4.7e-51 205.7 239 47.3
Medtr3g109690 Medicago truncatula HOM05D005944 ORTHO05D007188 6.1e-51 205.3 239 44.4
PSO173G0044 Papaver somniferum HOM05D005944 ORTHO05D007188 6.1e-51 205.3 271 44.3
CSS0001771 Camellia sinensis var. sinensis HOM05D005944 ORTHO05D007188 1.0e-50 204.5 277 44.4
MD15G1092800 Malus domestica HOM05D005944 ORTHO05D007188 1.0e-50 204.5 274 44.5
Cc08_g09670 Coffea canephora HOM05D005944 ORTHO05D007188 3.0e-50 203.0 268 44.4
vmacro23277 Vaccinium macrocarpon HOM05D005944 ORTHO05D007188 3.0e-50 203.0 246 45.1
Aqoxy7G01465 Aquilegia oxysepala HOM05D005944 ORTHO05D007188 1.5e-49 200.7 254 46.5
Migut.A00199 Erythranthe guttata HOM05D005944 ORTHO05D007188 2.0e-49 200.3 268 43.3
TWI34G0404 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 3.3e-49 199.5 238 45.8
Peaxi162Scf00227g00915 Petunia axillaris HOM05D005944 ORTHO05D007188 4.4e-49 199.1 256 41.8
Gorai.010G106200 Gossypium raimondii HOM05D005944 ORTHO05D007188 9.7e-49 198.0 246 45.1
Gohir.D06G092200 Gossypium hirsutum HOM05D005944 ORTHO05D007188 1.3e-48 197.6 246 45.1
DCAR_003123 Daucus carota HOM05D005944 ORTHO05D007188 1.7e-48 197.2 268 42.5
Rhsim07G0147000 Rhododendron simsii HOM05D005944 ORTHO05D007188 2.2e-48 196.8 241 45.6
Sc09g0009320 Simmondsia chinensis HOM05D005944 ORTHO05D007188 2.8e-48 196.4 276 43.1
Lsat_1_v5_gn_5_33661 Lactuca sativa HOM05D005944 ORTHO05D007188 3.7e-48 196.1 244 41.8
TWI63G0268 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 3.7e-48 196.1 266 44.4
Gohir.A06G092600 Gossypium hirsutum HOM05D005944 ORTHO05D007188 4.8e-48 195.7 246 43.9
Atru.chr7.2083 Acer truncatum HOM05D005944 ORTHO05D007188 8.2e-48 194.9 275 42.9
MELO3C011137.2 Cucumis melo HOM05D005944 ORTHO05D007188 1.1e-47 194.5 266 42.1
Nitab4.5_0003794g0090 Nicotiana tabacum HOM05D005944 ORTHO05D007188 3.1e-47 193.0 276 41.3
PGSC0003DMG400002225 Solanum tuberosum HOM05D005944 ORTHO05D007188 9.1e-47 191.4 268 41.4
Solyc08g066550.3 Solanum lycopersicum HOM05D005944 ORTHO05D007188 1.2e-46 191.0 231 46.3
Sopen08g020390 Solanum pennellii HOM05D005944 ORTHO05D007188 1.2e-46 191.0 277 41.9
Ah.10g034990 Amaranthus hybridus HOM05D005944 ORTHO05D007188 2.0e-46 190.3 249 43.8
SalBow4G1457 Salvia bowleyana HOM05D005944 ORTHO05D007188 2.0e-46 190.3 250 45.2
Zm00001eb384710 Zea mays HOM05D005944 ORTHO05D007188 2.6e-46 189.9 240 43.8
Nitab4.5_0001567g0220 Nicotiana tabacum HOM05D005944 ORTHO05D007188 1.0e-45 188.0 249 42.6
Sed0026395 Sechium edule HOM05D005944 ORTHO05D007188 1.0e-45 188.0 265 43.4
ECA246G4186 Erigeron canadensis HOM05D005944 ORTHO05D007188 1.7e-45 187.2 241 41.5
PGSC0003DMG400018561 Solanum tuberosum HOM05D005944 ORTHO05D007188 1.1e-44 184.5 255 40.4
EL10Ac2g04013 Beta vulgaris HOM05D005944 ORTHO05D007188 1.9e-44 183.7 239 43.9
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 1.9e-44 183.7 250 43.6
HanXRQChr08g0234421 Helianthus annuus HOM05D005944 ORTHO05D007188 6.1e-43 178.7 245 39.6
unitig_32.g11474 Utricularia gibba HOM05D005944 ORTHO05D007188 1.8e-42 177.2 266 39.8
Sed0020456 Sechium edule HOM05D005944 ORTHO05D007188 2.3e-42 176.8 250 42.4
SGA_v2.0_scaffold243G44289 Striga asiatica HOM05D005944 ORTHO05D007188 2.3e-42 176.8 246 41.9
EL10Ac2g04010 Beta vulgaris HOM05D005944 ORTHO05D007188 3.0e-42 176.4 239 42.3
HPP92_024066 Vanilla planifolia HOM05D005944 ORTHO05D007188 3.0e-42 176.4 253 40.3
Nitab4.5_0000664g0190 Nicotiana tabacum HOM05D005944 ORTHO05D007188 1.5e-41 174.1 270 38.1
AUR62009271 Chenopodium quinoa HOM05D005944 ORTHO05D007188 1.3e-40 171.0 239 40.6
Os06g0554100 Oryza sativa ssp. japonica HOM05D005944 ORTHO05D007188 8.3e-40 168.3 243 40.3
AUR62039710 Chenopodium quinoa HOM05D005944 ORTHO05D007188 1.1e-39 167.9 246 39.8
ECA233G3370 Erigeron canadensis HOM05D005944 ORTHO05D007188 9.1e-39 164.9 231 41.6
AUR62011965 Chenopodium quinoa HOM05D005944 ORTHO05D007188 1.2e-38 164.5 239 39.3
TWI63G1513 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 5.9e-38 162.2 202 43.6
Ah.02g111320 Amaranthus hybridus HOM05D005944 ORTHO05D007188 6.5e-37 158.7 245 40.4
EL10Ac5g10487 Beta vulgaris HOM05D005944 ORTHO05D007188 4.2e-36 156.0 235 40.4
C02p05290 Brassica napus HOM05D005944 ORTHO05D007188 3.6e-35 152.9 216 45.4
RcHm_v2.0_Chr6g0306401 Rosa chinensis HOM05D005944 ORTHO05D007188 6.8e-34 148.7 237 36.7
HanXRQChr02g0050591 Helianthus annuus HOM05D005944 ORTHO05D007188 4.4e-33 146.0 226 38.5
Nitab4.5_0001515g0030 Nicotiana tabacum HOM05D005944 ORTHO05D007188 1.7e-32 144.1 276 34.1
FvH4_2g35480 Fragaria vesca HOM05D005944 ORTHO05D007188 3.7e-32 142.9 235 35.7
Glyma.04G084500 Glycine max HOM05D005944 ORTHO05D007188 3.7e-32 142.9 126 60.3
FAN27G2199 Fragaria x ananassa HOM05D005944 ORTHO05D007188 4.8e-32 142.5 235 35.7
BolC2t06477H Brassica oleracea HOM05D005944 ORTHO05D007188 8.3e-32 141.7 157 52.9
Actinidia14678 Actinidia chinensis HOM05D005944 ORTHO05D007188 1.1e-31 141.4 106 67.0
Peaxi162Scf00247g00005 Petunia axillaris HOM05D005944 ORTHO05D007188 2.4e-31 140.2 139 55.4
Solyc11g071190.3 Solanum lycopersicum HOM05D005944 ORTHO05D007188 4.1e-31 139.4 118 58.5
Sopen11g028870 Solanum pennellii HOM05D010581 ORTHO05D012655 9.1e-31 138.3 139 53.2
FAN20G0862 Fragaria x ananassa HOM05D005944 ORTHO05D007188 1.2e-30 137.9 242 33.5
ATR0561G048 Amborella trichopoda HOM05D005944 ORTHO05D007188 2.7e-30 136.7 260 36.5
FAN15G0753 Fragaria x ananassa HOM05D005944 ORTHO05D007188 7.7e-30 135.2 235 34.5
HanXRQChr13g0402041 Helianthus annuus HOM05D005944 ORTHO05D007188 3.8e-29 132.9 183 41.0
PSO824G0019 Papaver somniferum HOM05D005944 ORTHO05D007188 2.5e-28 130.2 238 36.1
PSO832G4257 Papaver somniferum HOM05D005944 ORTHO05D007188 1.3e-24 117.9 236 33.1
PSO832G3272 Papaver somniferum HOM05D005944 ORTHO05D007188 5.4e-23 112.5 241 34.0
AagrBONN_evm.TU.Sc2ySwM_228.5588 Anthoceros agrestis HOM05D005944 ORTHO05D007188 9.2e-23 111.7 263 32.3
SMO244G0014 Selaginella moellendorffii HOM05D005944 ORTHO05D007188 2.0e-22 110.5 255 31.8
PSO507G0019 Papaver somniferum HOM05D005944 ORTHO05D007188 3.5e-22 109.8 203 36.9
PSO173G0086 Papaver somniferum HOM05D005944 ORTHO05D007188 3.9e-21 106.3 238 30.7
Zm00001eb277580 Zea mays HOM05D005944 ORTHO05D007188 6.6e-21 105.5 149 45.0
Pp3c11_3140 Physcomitrium patens HOM05D005944 ORTHO05D007188 1.1e-20 104.8 251 33.1
SEGI_16652 Sequoiadendron giganteum HOM05D005944 ORTHO05D007188 1.9e-20 104.0 237 30.8
Cre09.g393550 Chlamydomonas reinhardtii HOM05D005944 ORTHO05D007188 3.6e-19 99.8 238 32.4
SMO281G0003 Selaginella moellendorffii HOM05D005944 ORTHO05D007188 2.3e-18 97.1 233 32.2
PSO173G0103 Papaver somniferum HOM05D005944 ORTHO05D007188 3.7e-16 89.7 211 33.6
PSO824G0035 Papaver somniferum HOM05D004877 ORTHO05D007188 3.2e-15 86.7 213 33.8
MCO02G382 Micromonas commoda HOM05D005944 ORTHO05D007188 1.7e-13 80.9 271 29.2
CDE05G1550 Ceratophyllum demersum HOM05D005944 ORTHO05D007188 4.3e-12 76.3 141 30.5
A02p01110 Brassica napus HOM05D005944 ORTHO05D007188 5.8e-09 65.9 33 90.9
RcHm_v2.0_Chr6g0306291 Rosa chinensis HOM05D005944 ORTHO05D007188 4.9e-08 62.8 56 48.2
Mapoly0068s0072 Marchantia polymorpha HOM05D005944 ORTHO05D007188 3.2e-07 60.1 155 28.4
BcaNung01940 Brassica carinata HOM05D005944 ORTHO05D007188 4.1e-07 59.7 50 62.0
RcHm_v2.0_Chr6g0306391 Rosa chinensis HOM05D005944 ORTHO05D007188 1.6e-06 57.8 95 35.8
RcHm_v2.0_Chr6g0306281 Rosa chinensis HOM05D005944 ORTHO05D007188 7.8e-06 55.5 37 51.4


User provided reference genes

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