Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p25910 Brassica napus HOM05D003275 ORTHO05D003732 7.1e-40 166.8 82 100.0
BolC9t59327H Brassica oleracea HOM05D003275 ORTHO05D003732 1.6e-39 165.6 82 98.8
BraA10t44653Z Brassica rapa HOM05D003275 ORTHO05D003732 1.7e-38 162.2 83 98.8
A10p25900 Brassica napus HOM05D003275 ORTHO05D003732 1.2e-34 149.4 73 100.0
BcaC04g19190 Brassica carinata HOM05D003275 ORTHO05D003732 2.6e-34 148.3 73 98.6
C09p64990 Brassica napus HOM05D003275 ORTHO05D003732 2.6e-34 148.3 73 98.6
Thhalv10014390m.g Eutrema salsugineum HOM05D003275 ORTHO05D003732 5.4e-32 140.6 82 82.9
Sp6g31730 Schrenkiella parvula HOM05D003275 ORTHO05D003732 2.1e-31 138.7 82 81.7
Carub.0006s1040 Capsella rubella HOM05D003275 ORTHO05D003732 2.7e-31 138.3 82 80.5
CARHR201290 Cardamine hirsuta HOM05D003275 ORTHO05D003732 1.1e-29 132.9 82 75.6
AT5G11870 Arabidopsis thaliana HOM05D003275 ORTHO05D003732 7.3e-29 130.2 82 76.8
THA.LOC104799163 Tarenaya hassleriana HOM05D003275 ORTHO05D003732 6.2e-28 127.1 82 73.2
AL6G22630 Arabidopsis lyrata HOM05D003275 ORTHO05D003732 2.4e-27 125.2 82 74.4
Gohir.A06G087400 Gossypium hirsutum HOM05D003275 ORTHO05D003732 3.0e-22 108.2 82 63.4
BolC3t20831H Brassica oleracea HOM05D003275 ORTHO05D003732 5.1e-22 107.5 73 76.7
Gohir.D06G086800 Gossypium hirsutum HOM05D003275 ORTHO05D003732 6.7e-22 107.1 82 63.4
Gorai.010G100200 Gossypium raimondii HOM05D003275 ORTHO05D003732 7.4e-21 103.6 78 62.8
Aa31LG3G15330 Aethionema arabicum HOM05D003275 ORTHO05D003732 1.3e-20 102.8 83 60.2
C03p85430 Brassica napus HOM05D003275 ORTHO05D039187 1.3e-20 102.8 73 74.0
Thecc.09G054400 Theobroma cacao HOM05D003275 ORTHO05D003732 1.6e-20 102.4 82 62.2
Duzib168G2080 Durio zibethinus HOM05D003275 ORTHO05D003732 2.1e-20 102.1 82 59.8
BcaC01g00871 Brassica carinata HOM05D003275 ORTHO05D039187 6.2e-20 100.5 73 72.6
Sabra06G0177100 Salix brachista HOM05D003275 ORTHO05D003732 8.1e-20 100.1 82 59.8
Atru.chr7.1081 Acer truncatum HOM05D003275 ORTHO05D003732 1.8e-19 99.0 73 60.3
Haze_18185 Corylus avellana HOM05D003275 ORTHO05D003732 1.8e-19 99.0 78 59.0
Haze_18178 Corylus avellana HOM05D003275 ORTHO05D003732 9.0e-19 96.7 73 61.6
CANSAT25G2318 Cannabis sativa HOM05D003275 ORTHO05D003732 1.2e-18 96.3 82 56.1
TWI34G1634 Tripterygium wilfordii HOM05D003275 ORTHO05D003732 1.5e-18 95.9 78 59.0
Potri.006G228700 Populus trichocarpa HOM05D003275 ORTHO05D003732 3.4e-18 94.7 81 56.8
Ciclev10009178m.g Citrus clementina HOM05D003275 ORTHO05D003732 5.8e-18 94.0 78 57.7
Eucgr.C00652 Eucalyptus grandis HOM05D003275 ORTHO05D003732 5.8e-18 94.0 73 60.3
Nn6g35489 Nelumbo nucifera HOM05D003275 ORTHO05D003732 5.8e-18 94.0 73 57.5
Nn8g38852 Nelumbo nucifera HOM05D003275 ORTHO05D003732 1.0e-17 93.2 82 53.7
CiPaw.15G038500 Carya illinoinensis HOM05D003275 ORTHO05D003732 1.3e-17 92.8 81 53.1
Glyma.06G052300 Glycine max HOM05D003275 ORTHO05D003732 1.3e-17 92.8 82 51.2
Phvul.009G077800 Phaseolus vulgaris HOM05D003275 ORTHO05D003732 1.3e-17 92.8 75 53.3
TAR383G0517 Trochodendron aralioides HOM05D003275 ORTHO05D003732 2.2e-17 92.0 75 57.3
FvH4_2g31810 Fragaria vesca HOM05D003275 ORTHO05D003732 2.9e-17 91.7 78 53.8
GSVIVG01035399001 Vitis vinifera HOM05D003275 ORTHO05D003732 2.9e-17 91.7 73 56.2
QL02p001118 Quercus lobata HOM05D003275 ORTHO05D003732 3.8e-17 91.3 81 51.9
RcHm_v2.0_Chr6g0311011 Rosa chinensis HOM05D003275 ORTHO05D003732 3.8e-17 91.3 78 53.8
PSO832G1640 Papaver somniferum HOM05D003275 ORTHO05D003732 1.9e-16 89.0 78 51.3
MD15G1059000 Malus domestica HOM05D003275 ORTHO05D003732 2.5e-16 88.6 78 50.0
arahy.Tifrunner.gnm1.ann1.32MGU6 Arachis hypogaea HOM05D003275 ORTHO05D003732 4.2e-16 87.8 71 53.5
Glyma.04G051500 Glycine max HOM05D003275 ORTHO05D003732 4.2e-16 87.8 82 50.0
Psat0ss1279g0400 Pisum sativum HOM05D003275 ORTHO05D003732 7.1e-16 87.0 75 49.3
MBI01_g01261_MAGBIO Magnolia biondii HOM05D003275 ORTHO05D003732 9.3e-16 86.7 70 54.3
MD08G1062700 Malus domestica HOM05D003275 ORTHO05D003732 2.1e-15 85.5 78 50.0
HPP92_000672 Vanilla planifolia HOM05D003275 ORTHO05D003732 2.7e-15 85.1 73 53.4
Manes.03G048000 Manihot esculenta HOM05D003275 ORTHO05D003732 3.5e-15 84.7 73 53.4
PGR031G0256 Punica granatum HOM05D003275 ORTHO05D003732 3.5e-15 84.7 92 47.8
Lalb_Chr08g0245071 Lupinus albus HOM05D003275 ORTHO05D003732 4.6e-15 84.3 74 50.0
VMungo1309G2424 Vigna mungo HOM05D003275 ORTHO05D003732 4.6e-15 84.3 72 50.0
THA.LOC104798496 Tarenaya hassleriana HOM05D003275 ORTHO05D003732 6.0e-15 84.0 78 51.3
Lalb_Chr14g0366311 Lupinus albus HOM05D003275 ORTHO05D003732 1.0e-14 83.2 70 51.4
ATR0026G038 Amborella trichopoda HOM05D003275 ORTHO05D003732 2.3e-14 82.0 73 52.1
arahy.Tifrunner.gnm1.ann1.WQ6HRD Arachis hypogaea HOM05D003275 ORTHO05D003732 3.9e-14 81.3 77 49.4
Lj1g0012846 Lotus japonicus HOM05D003275 ORTHO05D003732 3.9e-14 81.3 71 47.9
SEGI_25464 Sequoiadendron giganteum HOM05D003275 ORTHO05D003732 3.9e-14 81.3 75 52.0
Migut.B00827 Erythranthe guttata HOM05D003275 ORTHO05D003732 6.7e-14 80.5 78 46.2
AL2G30800 Arabidopsis lyrata HOM05D003275 ORTHO05D003732 8.7e-14 80.1 78 47.4
AT1G71190 Arabidopsis thaliana HOM05D003275 ORTHO05D003732 8.7e-14 80.1 78 47.4
CAN.G798.6 Capsicum annuum HOM05D003275 ORTHO05D003732 1.1e-13 79.7 75 49.3
Psat0s4497g0080 Pisum sativum HOM05D003275 ORTHO05D003732 1.1e-13 79.7 75 48.0
THA.LOC104812760 Tarenaya hassleriana HOM05D003275 ORTHO05D003732 1.1e-13 79.7 78 46.2
C06p35730 Brassica napus HOM05D000145 ORTHO05D003732 1.5e-13 79.3 78 46.2
BolC6t38696H Brassica oleracea HOM05D000145 ORTHO05D003732 1.5e-13 79.3 78 46.2
Thhalv10018974m.g Eutrema salsugineum HOM05D003275 ORTHO05D003732 1.5e-13 79.3 78 46.2
Potri.001G211600 Populus trichocarpa HOM05D003275 ORTHO05D003732 1.5e-13 79.3 75 48.0
PGSC0003DMG400023796 Solanum tuberosum HOM05D003275 ORTHO05D003732 1.5e-13 79.3 75 48.0
Oeu008899.2 Olea europaea HOM05D003275 ORTHO05D003732 1.9e-13 79.0 78 48.7
Peaxi162Scf00011g00534 Petunia axillaris HOM05D003275 ORTHO05D003732 1.9e-13 79.0 75 48.0
PGR142G1307 Punica granatum HOM05D003275 ORTHO05D003732 1.9e-13 79.0 77 49.4
Thecc.02G087700 Theobroma cacao HOM05D003275 ORTHO05D003732 1.9e-13 79.0 78 47.4
GSVIVG01022875001 Vitis vinifera HOM05D003275 ORTHO05D003732 1.9e-13 79.0 78 48.7
Aa31LG4G9320 Aethionema arabicum HOM05D003275 ORTHO05D003732 2.5e-13 78.6 78 46.2
BcaC08g45789 Brassica carinata HOM05D000145 ORTHO05D003732 2.5e-13 78.6 78 44.9
A07p30830 Brassica napus HOM05D000145 ORTHO05D003732 2.5e-13 78.6 78 44.9
BraA07t30720Z Brassica rapa HOM05D000145 ORTHO05D003732 2.5e-13 78.6 78 44.9
CARHR064460 Cardamine hirsuta HOM05D003275 ORTHO05D003732 2.5e-13 78.6 75 46.7
Medtr1g016080 Medicago truncatula HOM05D003275 ORTHO05D003732 2.5e-13 78.6 73 46.6
PGR044G2065 Punica granatum HOM05D003275 ORTHO05D003732 2.5e-13 78.6 73 49.3
Sed0021534 Sechium edule HOM05D003275 ORTHO05D003732 2.5e-13 78.6 78 47.4
TWI14G0966 Tripterygium wilfordii HOM05D003275 ORTHO05D003732 3.3e-13 78.2 78 46.2
Cpa.g.sc113.53 Carica papaya HOM05D003275 ORTHO05D003732 4.3e-13 77.8 78 47.4
Nitab4.5_0000816g0100 Nicotiana tabacum HOM05D003275 ORTHO05D003732 4.3e-13 77.8 75 48.0
Sabra01G0163400 Salix brachista HOM05D003275 ORTHO05D003732 4.3e-13 77.8 78 46.2
Solyc01g104080.4 Solanum lycopersicum HOM05D003275 ORTHO05D003732 4.3e-13 77.8 75 48.0
Sopen01g046490 Solanum pennellii HOM05D003275 ORTHO05D003732 4.3e-13 77.8 75 48.0
Actinidia26152 Actinidia chinensis HOM05D003275 ORTHO05D003732 5.7e-13 77.4 78 46.2
EL10Ac6g14059 Beta vulgaris HOM05D003275 ORTHO05D003732 5.7e-13 77.4 79 48.1
CiPaw.05G048000 Carya illinoinensis HOM05D003275 ORTHO05D003732 5.7e-13 77.4 78 46.2
FAN08G1391 Fragaria x ananassa HOM05D003275 ORTHO05D003732 5.7e-13 77.4 78 46.2
FAN18G2082 Fragaria x ananassa HOM05D003275 ORTHO05D003732 5.7e-13 77.4 78 46.2
MD08G1233100 Malus domestica HOM05D003275 ORTHO05D003732 5.7e-13 77.4 78 46.2
Nitab4.5_0007514g0030 Nicotiana tabacum HOM05D003275 ORTHO05D003732 5.7e-13 77.4 75 48.0
Prupe.1G571000 Prunus persica HOM05D003275 ORTHO05D003732 5.7e-13 77.4 78 46.2
QL02p099154 Quercus lobata HOM05D003275 ORTHO05D003732 5.7e-13 77.4 75 48.0
CSS0025935 Camellia sinensis var. sinensis HOM05D003275 ORTHO05D003732 7.4e-13 77.0 78 46.2
CSS0029284 Camellia sinensis var. sinensis HOM05D003275 ORTHO05D003732 7.4e-13 77.0 78 46.2
ClCG09G013890 Citrullus lanatus HOM05D003275 ORTHO05D003732 7.4e-13 77.0 69 50.7
ECA240G3384 Erigeron canadensis HOM05D000006 ORTHO05D000001 7.4e-13 77.0 78 44.9
FAN15G3499 Fragaria x ananassa HOM05D003275 ORTHO05D003732 7.4e-13 77.0 96 43.8
Gohir.D13G033600 Gossypium hirsutum HOM05D003275 ORTHO05D003732 7.4e-13 77.0 78 46.2
Gorai.013G038000 Gossypium raimondii HOM05D003275 ORTHO05D003732 7.4e-13 77.0 78 46.2
Sp5g26350 Schrenkiella parvula HOM05D003275 ORTHO05D003732 7.4e-13 77.0 75 44.0
SGA_v2.0_scaffold110G31330 Striga asiatica HOM05D003275 ORTHO05D003732 7.4e-13 77.0 78 47.4
TPR.G13175 Trifolium pratense HOM05D003275 ORTHO05D003732 7.4e-13 77.0 75 45.3
CANSAT11G1659 Cannabis sativa HOM05D003275 ORTHO05D003732 9.6e-13 76.6 78 46.2
Ciclev10002064m.g Citrus clementina HOM05D003275 ORTHO05D003732 9.6e-13 76.6 78 46.2
TAR381G0360 Trochodendron aralioides HOM05D003275 ORTHO05D003732 9.6e-13 76.6 78 47.4
MSTRG.16515 Avicennia marina HOM05D003275 ORTHO05D003732 1.3e-12 76.3 78 47.4
Hma1.2p1_0217F.1_g092140 Hydrangea macrophylla HOM05D003275 ORTHO05D003732 1.3e-12 76.3 78 47.4
Manes.07G017000 Manihot esculenta HOM05D003275 ORTHO05D003732 1.3e-12 76.3 78 46.2
vmacro19886 Vaccinium macrocarpon HOM05D003275 ORTHO05D003732 1.3e-12 76.3 78 46.2
BcaB03g15596 Brassica carinata HOM05D003275 ORTHO05D003732 1.6e-12 75.9 73 45.2
COL.COLO4_11783 Corchorus olitorius HOM05D003275 ORTHO05D003732 1.6e-12 75.9 78 43.6
Haze_01710 Corylus avellana HOM05D003275 ORTHO05D003732 1.6e-12 75.9 74 47.3
Eucgr.I02729 Eucalyptus grandis HOM05D003275 ORTHO05D003732 1.6e-12 75.9 77 45.5
BcaB03g14876 Brassica carinata HOM05D003275 ORTHO05D003732 2.1e-12 75.5 73 43.8
DCAR_006703 Daucus carota HOM05D003275 ORTHO05D003732 2.1e-12 75.5 78 47.4
Gohir.A13G035200 Gossypium hirsutum HOM05D003275 ORTHO05D003732 2.1e-12 75.5 78 44.9
Carub.0002s1807 Capsella rubella HOM05D003275 ORTHO05D003732 2.8e-12 75.1 78 46.2
HanXRQChr03g0073631 Helianthus annuus HOM05D003275 ORTHO05D003732 2.8e-12 75.1 78 43.6
Rhsim05G0119500 Rhododendron simsii HOM05D003275 ORTHO05D003732 2.8e-12 75.1 78 46.2
RcHm_v2.0_Chr7g0222011 Rosa chinensis HOM05D003275 ORTHO05D003732 2.8e-12 75.1 78 44.9
Atru.chr4.1466 Acer truncatum HOM05D003275 ORTHO05D003732 3.7e-12 74.7 78 43.6
CSS0049502 Camellia sinensis var. sinensis HOM05D003275 ORTHO05D003732 3.7e-12 74.7 78 46.2
CBR_g3553 Chara braunii HOM05D003275 ORTHO05D003732 3.7e-12 74.7 79 41.8
Cc02_g22610 Coffea canephora HOM05D003275 ORTHO05D003732 3.7e-12 74.7 75 46.7
MELO3C014372.2 Cucumis melo HOM05D003275 ORTHO05D003732 3.7e-12 74.7 78 44.9
CsaV3_6G037450 Cucumis sativus L. HOM05D003275 ORTHO05D003732 3.7e-12 74.7 78 44.9
Medtr3g104420 Medicago truncatula HOM05D003275 ORTHO05D003732 3.7e-12 74.7 71 46.5
HPP92_011386 Vanilla planifolia HOM05D003275 ORTHO05D003732 4.8e-12 74.3 75 45.3
Dinv19374 Davidia involucrata HOM05D003275 ORTHO05D003732 6.2e-12 73.9 77 45.5
Sc07g0004860 Simmondsia chinensis HOM05D003275 ORTHO05D003732 6.2e-12 73.9 78 46.2
Duzib132G0935 Durio zibethinus HOM05D003275 ORTHO05D003732 8.2e-12 73.6 78 46.2
Zm00001eb362500 Zea mays HOM05D003275 ORTHO05D003732 1.1e-11 73.2 78 42.3
Aqoxy6G00228 Aquilegia oxysepala HOM05D001206 ORTHO05D002068 1.4e-11 72.8 78 44.9
CARHR056290 Cardamine hirsuta HOM05D003275 ORTHO05D003732 1.4e-11 72.8 73 45.2
Lj5g0008225 Lotus japonicus HOM05D003275 ORTHO05D003732 2.4e-11 72.0 73 46.6
arahy.Tifrunner.gnm1.ann1.4G20NP Arachis hypogaea HOM05D003275 ORTHO05D003732 3.1e-11 71.6 78 44.9
arahy.Tifrunner.gnm1.ann1.9MB0YU Arachis hypogaea HOM05D003275 ORTHO05D003732 4.0e-11 71.2 78 44.9
Ca_17783_v3 Cicer arietinum L. HOM05D003275 ORTHO05D003732 4.0e-11 71.2 78 43.6
AUR62041115 Chenopodium quinoa HOM05D003275 ORTHO05D003732 5.3e-11 70.9 75 45.3
Nn5g28307 Nelumbo nucifera HOM05D003275 ORTHO05D003732 5.3e-11 70.9 78 44.9
PSO170G2758 Papaver somniferum HOM05D003275 ORTHO05D003732 5.3e-11 70.9 77 44.2
Pp3c3_10770 Physcomitrium patens HOM05D003275 ORTHO05D003732 5.3e-11 70.9 77 42.9
Lalb_Chr18g0060911 Lupinus albus HOM05D003275 ORTHO05D003732 6.9e-11 70.5 78 43.6
Glyma.08G186900 Glycine max HOM05D003275 ORTHO05D003732 9.0e-11 70.1 78 43.6
PSO528G0003 Papaver somniferum HOM05D003275 ORTHO05D003732 9.0e-11 70.1 77 42.9
TPR.G40725 Trifolium pratense HOM05D003275 ORTHO05D003732 9.0e-11 70.1 64 51.6
AUR62014227 Chenopodium quinoa HOM05D003275 ORTHO05D003732 1.2e-10 69.7 75 44.0
Glyma.15G046100 Glycine max HOM05D003275 ORTHO05D003732 1.5e-10 69.3 78 43.6
Lsat_1_v5_gn_9_118660 Lactuca sativa HOM05D003275 ORTHO05D003732 1.5e-10 69.3 78 43.6
Phvul.011G155400 Phaseolus vulgaris HOM05D003275 ORTHO05D003732 1.5e-10 69.3 78 41.0
ATR0584G052 Amborella trichopoda HOM05D003275 ORTHO05D003732 2.6e-10 68.6 78 42.3
Lalb_Chr07g0185451 Lupinus albus HOM05D003275 ORTHO05D003732 2.6e-10 68.6 78 43.6
VMungo0251G2850 Vigna mungo HOM05D003275 ORTHO05D003732 3.4e-10 68.2 74 43.2
CSS0010820 Camellia sinensis var. sinensis HOM05D003275 ORTHO05D003732 4.5e-10 67.8 73 43.8
CSS0034523 Camellia sinensis var. sinensis HOM05D003275 ORTHO05D003732 4.5e-10 67.8 73 43.8
Ca_00066_v3 Cicer arietinum L. HOM05D003275 ORTHO05D003732 4.5e-10 67.8 78 41.0
Os01g0962200 Oryza sativa ssp. japonica HOM05D003275 ORTHO05D003732 4.5e-10 67.8 75 40.0
COL.COLO4_11784 Corchorus olitorius HOM05D003275 ORTHO05D003732 5.8e-10 67.4 77 40.3
Glyma.08G131300 Glycine max HOM05D003275 ORTHO05D003732 5.8e-10 67.4 78 41.0
MD08G1232600 Malus domestica HOM05D003275 ORTHO05D003732 5.8e-10 67.4 69 43.5
SMO339G0029 Selaginella moellendorffii HOM05D003275 ORTHO05D003732 5.8e-10 67.4 67 41.8
VMungo1127G2090 Vigna mungo HOM05D003275 ORTHO05D003732 7.6e-10 67.0 78 41.0
Ah.03g137170 Amaranthus hybridus HOM05D003275 ORTHO05D003732 1.0e-09 66.6 73 43.8
Medtr2g006770 Medicago truncatula HOM05D003275 ORTHO05D003732 1.0e-09 66.6 78 41.0
Nn5g28309 Nelumbo nucifera HOM05D003275 ORTHO05D003732 1.3e-09 66.2 77 44.2
Lj6g0004299 Lotus japonicus HOM05D003275 ORTHO05D003732 2.2e-09 65.5 75 41.3
SMO356G0484 Selaginella moellendorffii HOM05D003275 ORTHO05D003732 2.2e-09 65.5 75 37.3
Psat1g221280 Pisum sativum HOM05D003275 ORTHO05D003732 2.9e-09 65.1 68 42.6
TPR.G2088 Trifolium pratense HOM05D003275 ORTHO05D003732 2.9e-09 65.1 75 41.3
Lj4g0028052 Lotus japonicus HOM05D003275 ORTHO05D003732 3.8e-09 64.7 75 41.3
Mapoly0016s0101 Marchantia polymorpha HOM05D003275 ORTHO05D003732 3.8e-09 64.7 77 39.0
Psat7g059520 Pisum sativum HOM05D003275 ORTHO05D003732 3.8e-09 64.7 67 44.8
AagrBONN_evm.TU.Sc2ySwM_117.3889 Anthoceros agrestis HOM05D003275 ORTHO05D003732 1.1e-08 63.2 77 35.1
Medtr8g089715 Medicago truncatula HOM05D003275 ORTHO05D003732 1.9e-08 62.4 69 40.6
TPR.G6212 Trifolium pratense HOM05D003275 ORTHO05D003732 1.9e-08 62.4 69 40.6
Phvul.002G259100 Phaseolus vulgaris HOM05D003275 ORTHO05D003732 2.5e-08 62.0 74 40.5
CDE06G1849 Ceratophyllum demersum HOM05D003275 ORTHO05D003732 4.2e-08 61.2 75 38.7
Nn7g38013 Nelumbo nucifera HOM05D003275 ORTHO05D003732 5.5e-08 60.8 69 43.5
AL3G26750 Arabidopsis lyrata HOM05D003275 ORTHO05D003732 6.1e-07 57.4 50 64.0


User provided reference genes

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