Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p17410 Brassica napus HOM05D001038 ORTHO05D000395 2.5e-223 778.5 403 100.0
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 5.4e-165 584.7 394 79.9
BolC7t44008H Brassica oleracea HOM05D001038 ORTHO05D000395 6.9e-120 434.9 291 81.1
A07p31540 Brassica napus HOM05D001038 ORTHO05D100668 2.5e-98 363.2 180 100.0
BolC7t41881H Brassica oleracea HOM05D001038 ORTHO05D000395 3.8e-54 216.5 245 50.6
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 7.2e-53 212.2 233 51.5
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 8.0e-52 208.8 233 51.1
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 5.2e-51 206.1 257 46.7
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 4.0e-43 179.9 271 42.4
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 9.8e-42 175.3 258 44.2
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 8.3e-41 172.2 242 44.2
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 1.1e-40 171.8 290 39.7
C06p18900 Brassica napus HOM05D001038 ORTHO05D016716 1.8e-40 171.0 243 44.0
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 1.8e-40 171.0 242 43.8
C05p36690 Brassica napus HOM05D001038 ORTHO05D000395 7.0e-40 169.1 232 46.1
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 7.0e-40 169.1 259 42.5
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 7.0e-40 169.1 259 42.5
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 7.8e-39 165.6 239 44.4
BcaB05g23893 Brassica carinata HOM05D000015 ORTHO05D001173 1.2e-36 158.3 222 43.7
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 3.2e-32 143.7 262 38.9
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 4.1e-32 143.3 258 35.7
BcaB05g25087 Brassica carinata HOM05D001038 ORTHO05D000395 1.6e-31 141.4 245 39.2
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-31 141.0 262 38.9
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 7.8e-31 139.0 238 39.5
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 7.8e-31 139.0 207 44.4
C09p42070 Brassica napus HOM05D001038 ORTHO05D021947 1.7e-30 137.9 238 39.5
BraA05t20300Z Brassica rapa HOM05D001038 ORTHO05D000395 1.7e-30 137.9 208 43.3
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 3.9e-30 136.7 245 39.2
BraA09t36747Z Brassica rapa HOM05D001038 ORTHO05D000395 3.9e-30 136.7 262 37.8
BcaB06g26982 Brassica carinata HOM05D001038 ORTHO05D000395 5.0e-30 136.3 238 40.3
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 5.0e-30 136.3 237 38.8
C02p52080 Brassica napus HOM05D001038 ORTHO05D019962 5.0e-30 136.3 243 40.7
BolC2t11293H Brassica oleracea HOM05D001038 ORTHO05D019962 5.0e-30 136.3 243 40.7
BcaB08g35144 Brassica carinata HOM05D001038 ORTHO05D021599 8.6e-30 135.6 228 41.2
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 8.6e-30 135.6 263 37.6
BraA07t28816Z Brassica rapa HOM05D001038 ORTHO05D000395 1.1e-29 135.2 235 37.0
BraSC36t46061Z Brassica rapa HOM05D001038 ORTHO05D000395 7.3e-29 132.5 235 37.0
BcaB08g34782 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-28 131.7 372 31.2
BolC4t25611H Brassica oleracea HOM05D001038 ORTHO05D033058 1.2e-28 131.7 89 75.3
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 2.1e-28 131.0 237 37.1
BraA06t24545Z Brassica rapa HOM05D001038 ORTHO05D024045 2.8e-28 130.6 311 35.0
BraA04t16494Z Brassica rapa HOM05D001038 ORTHO05D021947 3.6e-28 130.2 256 35.9
BcaB03g16260 Brassica carinata HOM05D001038 ORTHO05D019962 2.3e-27 127.5 273 37.0
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 2.3e-27 127.5 307 33.6
A09p28390 Brassica napus HOM05D001038 ORTHO05D000395 5.2e-27 126.3 252 37.3
BolC6t38914H Brassica oleracea HOM05D001038 ORTHO05D000395 5.2e-27 126.3 228 39.0
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 6.8e-27 125.9 262 35.5
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 6.8e-27 125.9 262 35.5
C04p40310 Brassica napus HOM05D001038 ORTHO05D033058 1.2e-26 125.2 85 75.3
BraA02t06493Z Brassica rapa HOM05D001038 ORTHO05D000395 2.0e-26 124.4 265 36.2
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 3.4e-26 123.6 171 45.6
C09p35780 Brassica napus HOM05D001038 ORTHO05D000395 3.4e-26 123.6 260 35.4
BcaC04g20563 Brassica carinata HOM05D001038 ORTHO05D021947 7.5e-26 122.5 225 38.7
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 9.8e-26 122.1 245 36.3
BolC8t47295H Brassica oleracea HOM05D001038 ORTHO05D000395 1.3e-25 121.7 244 35.2
BolC9t56412H Brassica oleracea HOM05D001038 ORTHO05D000395 1.7e-25 121.3 260 35.0
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 1.1e-24 118.6 197 37.6
BraA02t08907Z Brassica rapa HOM05D001038 ORTHO05D000395 1.1e-24 118.6 256 36.3
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-24 118.2 288 33.0
C09p52160 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-24 118.2 256 34.8
C08p05950 Brassica napus HOM05D001038 ORTHO05D000395 2.4e-24 117.5 225 39.1
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 2.4e-24 117.5 227 36.1
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 4.1e-24 116.7 243 34.6
BolC9t58082H Brassica oleracea HOM05D001038 ORTHO05D000395 4.1e-24 116.7 256 34.4
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 1.2e-23 115.2 256 35.5
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 1.2e-23 115.2 256 35.5
C06p38180 Brassica napus HOM05D001038 ORTHO05D000395 2.1e-23 114.4 295 32.9
BolC4t27362H Brassica oleracea HOM05D001038 ORTHO05D000395 2.1e-23 114.4 93 64.5
A03p68060 Brassica napus HOM05D001038 ORTHO05D000395 3.5e-23 113.6 202 36.1
BcaB02g10843 Brassica carinata HOM05D001038 ORTHO05D000395 4.6e-23 113.2 288 33.0
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-22 112.1 239 36.4
A01p01820 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-22 111.7 247 34.0
BcaC04g21093 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-22 111.3 238 35.3
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-22 110.5 236 38.1
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-21 107.8 246 35.4
C01p11550 Brassica napus HOM05D001038 ORTHO05D040626 1.9e-21 107.8 378 30.4
A02p12560 Brassica napus HOM05D001038 ORTHO05D019929 3.3e-21 107.1 230 33.9
BraA10t43452Z Brassica rapa HOM05D001038 ORTHO05D019929 3.3e-21 107.1 230 33.9
BraA05t21706Z Brassica rapa HOM05D001038 ORTHO05D019929 4.3e-21 106.7 230 33.9
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 7.3e-21 105.9 241 34.0
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-20 104.8 227 34.4
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 1.6e-20 104.8 222 35.1
BolC7t42716H Brassica oleracea HOM05D001038 ORTHO05D019929 1.6e-20 104.8 230 33.9
BraA06t24710Z Brassica rapa HOM05D001038 ORTHO05D000395 1.6e-20 104.8 237 33.8
BcaB03g15871 Brassica carinata HOM05D001038 ORTHO05D027789 2.1e-20 104.4 154 46.8
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 2.1e-20 104.4 227 37.0
Thhalv10009967m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 2.1e-20 104.4 244 36.5
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 4.7e-20 103.2 220 34.1
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 4.7e-20 103.2 220 34.1
C03p74230 Brassica napus HOM05D001038 ORTHO05D000395 8.1e-20 102.4 93 67.7
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-19 102.1 272 33.8
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-19 102.1 272 33.8
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 4.0e-19 100.1 241 33.2
Thhalv10002771m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 6.8e-19 99.4 198 36.9
BolC6t36762H Brassica oleracea HOM05D001038 ORTHO05D000395 1.5e-18 98.2 70 72.9
BcaB01g04196 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-18 97.8 156 40.4
C09p39690 Brassica napus HOM05D001038 ORTHO05D000395 5.8e-18 96.3 92 60.9
BolC9t56849H Brassica oleracea HOM05D001038 ORTHO05D000395 5.8e-18 96.3 92 60.9
BolC3t18949H Brassica oleracea HOM05D001038 ORTHO05D000395 7.5e-18 95.9 198 39.9
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 9.9e-18 95.5 271 31.7
Thhalv10003372m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 9.9e-18 95.5 194 34.5
BcaB01g01303 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-17 95.1 180 40.6
BcaC03g15415 Brassica carinata HOM05D001038 ORTHO05D000395 6.4e-17 92.8 241 34.4
BolC7t41684H Brassica oleracea HOM05D001038 ORTHO05D010763 8.3e-17 92.4 236 35.2
BraA03t13820Z Brassica rapa HOM05D001038 ORTHO05D000395 8.3e-17 92.4 91 59.3
Thhalv10002173m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.1e-16 92.0 246 30.1
A10p07420 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-16 91.7 92 57.6
C09p37880 Brassica napus HOM05D001038 ORTHO05D000395 2.4e-16 90.9 250 32.8
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 2.4e-16 90.9 250 32.8
C07p12170 Brassica napus HOM05D001038 ORTHO05D010763 3.2e-16 90.5 236 33.9
BcaB06g28161 Brassica carinata HOM05D001038 ORTHO05D000395 4.1e-16 90.1 233 31.8
BcaC06g35567 Brassica carinata HOM05D001038 ORTHO05D000395 7.1e-16 89.4 137 45.3
C07p18280 Brassica napus HOM05D001038 ORTHO05D000395 7.1e-16 89.4 82 62.2
BolC6t36138H Brassica oleracea HOM05D001038 ORTHO05D014932 7.1e-16 89.4 219 28.8
BolC7t42338H Brassica oleracea HOM05D001038 ORTHO05D000395 1.6e-15 88.2 83 66.3
BraA06t25409Z Brassica rapa HOM05D001038 ORTHO05D000395 1.6e-15 88.2 83 65.1
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 3.5e-15 87.0 249 34.5
BcaC05g26744 Brassica carinata HOM05D001038 ORTHO05D000395 4.6e-15 86.7 247 32.0
BcaC05g27733 Brassica carinata HOM05D001038 ORTHO05D000395 4.6e-15 86.7 70 68.6
C05p37210 Brassica napus HOM05D001038 ORTHO05D000395 4.6e-15 86.7 70 68.6
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-14 85.5 235 31.9
Thhalv10029129m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.0e-14 85.5 267 29.2
BcaB05g23512 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-14 85.1 92 53.3
BcaC06g33611 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-14 84.7 91 53.8
Thhalv10002975m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 3.0e-14 84.0 295 31.9
A01p25970 Brassica napus HOM05D001038 ORTHO05D027789 3.9e-14 83.6 158 38.6
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-13 81.6 267 27.7
BcaC06g34271 Brassica carinata HOM05D001038 ORTHO05D000395 2.5e-13 80.9 69 68.1
BraA01t02516Z Brassica rapa HOM05D001038 ORTHO05D027789 3.3e-13 80.5 159 39.0
BcaB03g16061 Brassica carinata HOM05D001038 ORTHO05D000395 4.3e-13 80.1 196 33.2
BolC2t08169H Brassica oleracea HOM05D001038 ORTHO05D010946 4.3e-13 80.1 281 26.3
BcaB03g16620 Brassica carinata HOM05D001038 ORTHO05D000395 9.5e-13 79.0 231 31.2
A10p12170 Brassica napus HOM05D001038 ORTHO05D027789 1.2e-12 78.6 81 56.8
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 1.6e-12 78.2 131 42.0
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 1.6e-12 78.2 131 42.0
C08p04920 Brassica napus HOM05D009302 ORTHO05D010480 2.1e-12 77.8 122 39.3
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 2.1e-12 77.8 130 40.8
BcaB06g28131 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-12 77.4 196 31.1
BcaB03g16464 Brassica carinata HOM05D001038 ORTHO05D018589 6.2e-12 76.3 122 36.1
BcaB06g25472 Brassica carinata HOM05D001038 ORTHO05D010763 6.2e-12 76.3 128 33.6
BcaC08g44444 Brassica carinata HOM05D001038 ORTHO05D016716 1.4e-11 75.1 125 36.0
C02p30270 Brassica napus HOM05D001038 ORTHO05D000395 2.4e-11 74.3 49 75.5
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 6.8e-11 72.8 209 30.1
AL6G43780 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 8.9e-11 72.4 157 36.3
BcaB05g22891 Brassica carinata HOM05D001038 ORTHO05D010763 8.9e-11 72.4 122 34.4
BcaC06g35484 Brassica carinata HOM05D001038 ORTHO05D000395 8.9e-11 72.4 244 28.3
BolC1t03990H Brassica oleracea HOM05D001038 ORTHO05D000395 1.2e-10 72.0 171 32.2
BraA07t28563Z Brassica rapa HOM05D001038 ORTHO05D000395 2.0e-10 71.2 49 73.5
BcaB04g17690 Brassica carinata HOM05D001038 ORTHO05D018589 4.4e-10 70.1 156 31.4
BcaB06g28542 Brassica carinata HOM05D001038 ORTHO05D000395 4.4e-10 70.1 169 29.0
C09p45390 Brassica napus HOM05D001038 ORTHO05D024072 4.4e-10 70.1 188 33.0
BraA05t20013Z Brassica rapa HOM05D001038 ORTHO05D000395 4.4e-10 70.1 93 49.5
BolC2t11347H Brassica oleracea HOM05D001038 ORTHO05D000395 5.8e-10 69.7 152 33.6
Carub.0013s0014 Capsella rubella HOM05D001038 ORTHO05D000395 5.8e-10 69.7 246 26.0
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-09 68.6 232 30.2
AL8G20830 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 1.7e-09 68.2 220 29.5
BcaB02g11159 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-09 68.2 181 33.7
BcaC09g51573 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-09 68.2 262 26.3
C09p22250 Brassica napus HOM05D001038 ORTHO05D000395 1.7e-09 68.2 200 29.5
BolC3t19681H Brassica oleracea HOM05D001038 ORTHO05D000395 1.7e-09 68.2 93 53.8
BraA04t16611Z Brassica rapa HOM05D001038 ORTHO05D033058 6.4e-09 66.2 38 89.5
BcaB07g33328 Brassica carinata HOM05D001038 ORTHO05D010763 1.1e-08 65.5 96 38.5
BcaC04g23074 Brassica carinata HOM05D001038 ORTHO05D019962 3.2e-08 63.9 176 31.2
BcaC08g43120 Brassica carinata HOM05D001038 ORTHO05D032078 3.2e-08 63.9 145 33.8
C06p10570 Brassica napus HOM05D001038 ORTHO05D014932 3.2e-08 63.9 141 25.5
AL3G41000 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 5.4e-08 63.2 181 32.6
BolC5t32608H Brassica oleracea HOM05D001038 ORTHO05D000395 5.4e-08 63.2 207 29.0
C09p36260 Brassica napus HOM05D001038 ORTHO05D000395 9.2e-08 62.4 72 43.1
BraA06t24005Z Brassica rapa HOM05D001038 ORTHO05D000395 1.2e-07 62.0 132 36.4
C05p38680 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-07 61.6 211 28.4
BcaB08g34843 Brassica carinata HOM05D001038 ORTHO05D010946 2.1e-07 61.2 263 27.0
AL6G49460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 2.7e-07 60.8 187 28.9
BcaC06g33888 Brassica carinata HOM05D001038 ORTHO05D017617 3.5e-07 60.5 282 25.2
BolC9t57409H Brassica oleracea HOM05D001038 ORTHO05D024072 3.5e-07 60.5 179 30.7
C07p11760 Brassica napus HOM05D001038 ORTHO05D024045 4.6e-07 60.1 164 29.9
BcaB05g21586 Brassica carinata HOM05D001038 ORTHO05D000395 6.0e-07 59.7 256 23.4
C07p21850 Brassica napus HOM05D001038 ORTHO05D019929 6.0e-07 59.7 240 26.2
C02p39590 Brassica napus HOM05D001038 ORTHO05D021697 7.8e-07 59.3 77 46.8
C03p52030 Brassica napus HOM05D001038 ORTHO05D000395 1.0e-06 58.9 92 45.7
BolC3t17485H Brassica oleracea HOM05D001038 ORTHO05D000395 1.0e-06 58.9 92 45.7
AT2G07240 Arabidopsis thaliana HOM05D001038 ORTHO05D010763 1.3e-06 58.5 134 36.6
C07p60310 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-06 58.5 209 26.8
BolC2t09973H Brassica oleracea HOM05D001038 ORTHO05D021697 1.3e-06 58.5 49 57.1
BcaB08g34623 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-06 58.2 78 46.2
Thhalv10029276m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 2.3e-06 57.8 184 29.3
Thhalv10022419m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 3.0e-06 57.4 245 26.5
BcaB01g00119 Brassica carinata HOM05D001038 ORTHO05D000395 3.9e-06 57.0 242 26.0
A06p23100 Brassica napus HOM05D001038 ORTHO05D000395 5.1e-06 56.6 67 44.8
Sp6g10030 Schrenkiella parvula HOM05D013252 ORTHO05D000395 6.6e-06 56.2 151 27.8
C05p42760 Brassica napus HOM05D001038 ORTHO05D031796 8.7e-06 55.8 177 27.7


User provided reference genes

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