Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p17340 Brassica napus HOM05D004427 ORTHO05D005381 1.2e-129 466.5 223 100.0
BraA10t43818Z Brassica rapa HOM05D004427 ORTHO05D005381 6.0e-126 454.1 218 98.6
BcaB08g36313 Brassica carinata HOM05D004427 ORTHO05D005381 1.7e-107 392.9 227 85.0
Sp6g21820 Schrenkiella parvula HOM05D004427 ORTHO05D005381 5.9e-105 384.4 222 81.5
BcaB01g04643 Brassica carinata HOM05D004427 ORTHO05D005381 1.7e-104 382.9 222 81.1
CARHR273870 Cardamine hirsuta HOM05D004427 ORTHO05D005381 1.9e-103 379.4 222 79.3
AL8G36800 Arabidopsis lyrata HOM05D004427 ORTHO05D005381 1.2e-102 376.7 222 78.4
AL817U10010 Arabidopsis lyrata HOM05D004427 ORTHO05D005381 1.6e-102 376.3 222 78.8
C03p13030 Brassica napus HOM05D004427 ORTHO05D005381 1.6e-102 376.3 222 79.3
BraA03t10444Z Brassica rapa HOM05D004427 ORTHO05D005381 1.6e-102 376.3 222 79.7
A03p11310 Brassica napus HOM05D004427 ORTHO05D005381 3.6e-102 375.2 216 81.9
BolC3t13765H Brassica oleracea HOM05D004427 ORTHO05D005381 6.7e-101 370.9 216 79.6
AT5G60190 Arabidopsis thaliana HOM05D004427 ORTHO05D005381 1.5e-100 369.8 224 77.2
Carub.0008s2094 Capsella rubella HOM05D004427 ORTHO05D005381 3.5e-97 358.6 227 74.4
Aa31LG1G12350 Aethionema arabicum HOM05D004427 ORTHO05D005381 1.1e-95 353.6 222 75.7
BcaC04g19664 Brassica carinata HOM05D004427 ORTHO05D005381 1.9e-95 352.8 225 77.8
Thhalv10014584m.g Eutrema salsugineum HOM05D004427 ORTHO05D005381 4.2e-95 351.7 218 79.4
THA.LOC104799482 Tarenaya hassleriana HOM05D004427 ORTHO05D005381 1.2e-81 307.0 223 65.0
C09p52680 Brassica napus HOM05D004427 ORTHO05D005381 6.5e-80 301.2 171 84.2
BolC9t58136H Brassica oleracea HOM05D004427 ORTHO05D005381 6.5e-80 301.2 171 84.2
ClCG02G020830 Citrullus lanatus HOM05D004427 ORTHO05D005381 1.5e-68 263.5 228 57.0
Sopen05g001320 Solanum pennellii HOM05D004427 ORTHO05D005381 7.5e-68 261.2 222 56.3
PGSC0003DMG400013475 Solanum tuberosum HOM05D004427 ORTHO05D005381 1.7e-67 260.0 222 55.4
Haze_23944 Corylus avellana HOM05D004427 ORTHO05D005381 5.4e-66 255.0 226 55.3
Gorai.009G079500 Gossypium raimondii HOM05D004427 ORTHO05D005381 1.2e-65 253.8 227 54.6
Lj1C183T3 Lonicera japonica HOM05D004427 ORTHO05D005381 1.6e-65 253.4 220 54.5
COL.COLO4_25263 Corchorus olitorius HOM05D004427 ORTHO05D005381 2.0e-65 253.1 227 54.2
Gohir.D05G078000 Gossypium hirsutum HOM05D004427 ORTHO05D005381 2.7e-65 252.7 227 54.2
Cfa011378 Carpinus fangiana HOM05D004427 ORTHO05D005381 3.5e-65 252.3 226 54.9
Lj1C183T1 Lonicera japonica HOM05D004427 ORTHO05D005381 1.0e-64 250.8 220 55.5
vmacro14479 Vaccinium macrocarpon HOM05D004427 ORTHO05D005381 1.3e-64 250.4 223 54.7
GSVIVG01025117001 Vitis vinifera HOM05D004427 ORTHO05D005381 3.0e-64 249.2 223 56.1
Ca_19237_v3 Cicer arietinum L. HOM05D004427 ORTHO05D005381 5.0e-64 248.4 226 54.4
Gohir.A05G075200 Gossypium hirsutum HOM05D004427 ORTHO05D005381 6.6e-64 248.1 227 52.9
Lalb_Chr19g0137481 Lupinus albus HOM05D004427 ORTHO05D005381 6.6e-64 248.1 226 55.3
TWI75G0497 Tripterygium wilfordii HOM05D004427 ORTHO05D005381 6.6e-64 248.1 226 54.0
CsaV3_6G021480 Cucumis sativus L. HOM05D004427 ORTHO05D005381 1.9e-63 246.5 227 53.3
Dinv10838 Davidia involucrata HOM05D004427 ORTHO05D005381 1.9e-63 246.5 222 54.1
TAR623G1453 Trochodendron aralioides HOM05D004427 ORTHO05D005381 4.3e-63 245.4 227 52.0
MELO3C025732.2 Cucumis melo HOM05D004427 ORTHO05D005381 7.3e-63 244.6 222 55.0
ECA233G4215 Erigeron canadensis HOM05D004427 ORTHO05D005381 1.6e-62 243.4 220 54.5
Eucgr.J00959 Eucalyptus grandis HOM05D004427 ORTHO05D005381 1.6e-62 243.4 226 54.0
Sed0015128 Sechium edule HOM05D004427 ORTHO05D005381 1.6e-62 243.4 218 54.1
TPR.G2989 Trifolium pratense HOM05D004427 ORTHO05D005381 1.6e-62 243.4 226 53.1
CAN.G354.26 Capsicum annuum HOM05D004427 ORTHO05D005381 2.1e-62 243.0 223 53.8
QL01p036593 Quercus lobata HOM05D004427 ORTHO05D005381 2.1e-62 243.0 229 52.0
CiPaw.14G077000 Carya illinoinensis HOM05D004427 ORTHO05D005381 2.8e-62 242.7 227 53.7
Hma1.2p1_2156F.1_g315430 Hydrangea macrophylla HOM05D004427 ORTHO05D005381 3.6e-62 242.3 223 53.4
Rhsim01G0221200 Rhododendron simsii HOM05D004427 ORTHO05D005381 3.6e-62 242.3 223 52.9
Manes.04G026600 Manihot esculenta HOM05D004427 ORTHO05D005381 6.2e-62 241.5 224 54.9
AUR62037165 Chenopodium quinoa HOM05D004427 ORTHO05D005381 1.8e-61 240.0 224 51.3
CAN.G765.37 Capsicum annuum HOM05D004427 ORTHO05D005381 3.1e-61 239.2 223 52.5
MSTRG.21151 Avicennia marina HOM05D004427 ORTHO05D005381 5.2e-61 238.4 215 53.0
Oeu062268.1 Olea europaea HOM05D004427 ORTHO05D005381 5.2e-61 238.4 223 53.4
Cc01_g11690 Coffea canephora HOM05D004427 ORTHO05D005381 8.9e-61 237.7 221 49.3
Duzib168G1361 Durio zibethinus HOM05D004427 ORTHO05D005381 1.2e-60 237.3 227 52.9
Aqoxy4G03193 Aquilegia oxysepala HOM05D004427 ORTHO05D005381 1.5e-60 236.9 224 50.4
PGR119G1466 Punica granatum HOM05D004427 ORTHO05D005381 2.0e-60 236.5 225 53.3
Ciclev10029217m.g Citrus clementina HOM05D004427 ORTHO05D005381 2.6e-60 236.1 227 52.4
Lj3g0007721 Lotus japonicus HOM05D004427 ORTHO05D005381 2.6e-60 236.1 228 52.2
Psat7g222000 Pisum sativum HOM05D004427 ORTHO05D005381 2.6e-60 236.1 227 52.4
Nitab4.5_0000100g0070 Nicotiana tabacum HOM05D004427 ORTHO05D005381 3.4e-60 235.7 200 55.5
Nitab4.5_0000607g0030 Nicotiana tabacum HOM05D004427 ORTHO05D005381 5.8e-60 235.0 205 55.6
Nn2g10653 Nelumbo nucifera HOM05D004427 ORTHO05D005381 7.5e-60 234.6 227 50.2
Ah.02g113850 Amaranthus hybridus HOM05D004427 ORTHO05D005381 1.7e-59 233.4 223 52.5
Thecc.09G261900 Theobroma cacao HOM05D004427 ORTHO05D005381 1.7e-59 233.4 227 52.4
AUR62025117 Chenopodium quinoa HOM05D004427 ORTHO05D005381 2.2e-59 233.0 224 50.9
Duzib150G0661 Durio zibethinus HOM05D004427 ORTHO05D005381 2.2e-59 233.0 227 51.1
CSS0010329 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 2.9e-59 232.6 220 53.2
EL10Ac9g22377 Beta vulgaris HOM05D004427 ORTHO05D005381 4.9e-59 231.9 225 51.6
Medtr4g061080 Medicago truncatula HOM05D004427 ORTHO05D005381 4.9e-59 231.9 227 52.0
CANSAT54G0683 Cannabis sativa HOM05D004427 ORTHO05D005381 8.3e-59 231.1 223 51.6
HanXRQChr02g0051371 Helianthus annuus HOM05D004427 ORTHO05D005381 8.3e-59 231.1 220 52.3
RcHm_v2.0_Chr5g0061241 Rosa chinensis HOM05D004427 ORTHO05D005381 8.3e-59 231.1 226 54.9
Glyma.12G072600 Glycine max HOM05D004427 ORTHO05D005381 1.1e-58 230.7 226 51.3
Phvul.011G071700 Phaseolus vulgaris HOM05D004427 ORTHO05D005381 1.1e-58 230.7 226 50.4
PSO210G5092 Papaver somniferum HOM05D004427 ORTHO05D005381 1.4e-58 230.3 219 50.2
arahy.Tifrunner.gnm1.ann1.JL7YN4 Arachis hypogaea HOM05D004427 ORTHO05D005381 5.4e-58 228.4 226 51.3
arahy.Tifrunner.gnm1.ann1.T6X9B2 Arachis hypogaea HOM05D004427 ORTHO05D005381 7.0e-58 228.0 226 50.9
VMungo1127G1062 Vigna mungo HOM05D004427 ORTHO05D005381 9.2e-58 227.6 220 50.5
unitig_0.g1522 Utricularia gibba HOM05D004427 ORTHO05D005381 4.6e-57 225.3 223 46.6
FAN16G3079 Fragaria x ananassa HOM05D004427 ORTHO05D005381 1.3e-56 223.8 226 53.5
FAN25G0902 Fragaria x ananassa HOM05D004427 ORTHO05D005381 1.3e-56 223.8 226 53.1
FvH4_3g33710 Fragaria vesca HOM05D004427 ORTHO05D005381 1.7e-56 223.4 226 52.7
Peaxi162Scf00155g00071 Petunia axillaris HOM05D004427 ORTHO05D005381 3.9e-56 222.2 203 53.7
Lsat_1_v5_gn_6_24041 Lactuca sativa HOM05D004427 ORTHO05D005381 5.0e-56 221.9 218 50.9
FAN21G1733 Fragaria x ananassa HOM05D004427 ORTHO05D005381 1.1e-55 220.7 226 52.7
FAN11G1819 Fragaria x ananassa HOM05D004427 ORTHO05D005381 1.9e-55 219.9 226 52.7
Prupe.6G092400 Prunus persica HOM05D004427 ORTHO05D005381 9.5e-55 217.6 225 51.1
Migut.N02630 Erythranthe guttata HOM05D004427 ORTHO05D005381 1.6e-54 216.9 224 50.4
CSS0013146 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 1.8e-53 213.4 227 48.5
MD11G1123000 Malus domestica HOM05D004427 ORTHO05D005381 2.3e-53 213.0 219 53.4
CSS0042497 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 8.9e-53 211.1 223 48.9
SGA_v2.0_scaffold80G25743 Striga asiatica HOM05D004427 ORTHO05D005381 1.7e-51 206.8 225 48.9
MD09G1211300 Malus domestica HOM05D004427 ORTHO05D005381 7.1e-50 201.4 219 51.6
CSS0008575 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 3.0e-48 196.1 181 53.6
ATR0069G023 Amborella trichopoda HOM05D004427 ORTHO05D005381 1.9e-47 193.4 223 43.0
PSO210G2821 Papaver somniferum HOM05D004427 ORTHO05D005381 4.3e-47 192.2 222 44.6
QL03p001209 Quercus lobata HOM05D004427 ORTHO05D005381 1.4e-45 187.2 250 40.4
CSS0048170 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 7.6e-44 181.4 217 46.5
SHI06027 Sapria himalayana HOM05D004427 ORTHO05D005381 1.4e-42 177.2 218 47.2
SEGI_39191 Sequoiadendron giganteum HOM05D004427 ORTHO05D005381 3.2e-42 176.0 219 44.3
QL01p000714 Quercus lobata HOM05D004427 ORTHO05D005381 1.0e-40 171.0 236 39.8
Sabra13G0002300 Salix brachista HOM05D004427 ORTHO05D005381 3.9e-40 169.1 243 40.7
Potri.013G002700 Populus trichocarpa HOM05D004427 ORTHO05D005381 1.9e-39 166.8 242 40.9
AagrBONN_evm.TU.Sc2ySwM_344.2535 Anthoceros agrestis HOM05D004427 ORTHO05D005381 2.1e-38 163.3 226 40.7
Mapoly0009s0037 Marchantia polymorpha HOM05D004427 ORTHO05D005381 6.2e-38 161.8 225 39.6
TAR629G2862 Trochodendron aralioides HOM05D004427 ORTHO05D005381 8.9e-37 157.9 242 34.7
TAR371G1244 Trochodendron aralioides HOM05D004427 ORTHO05D005381 1.5e-36 157.1 252 34.5
TAR376G0174 Trochodendron aralioides HOM05D004427 ORTHO05D005381 3.8e-35 152.5 252 33.7
Os12g0102350 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 4.9e-35 152.1 220 40.5
Sc06g0007950 Simmondsia chinensis HOM05D004427 ORTHO05D005381 4.9e-35 152.1 137 56.2
Zm00001eb413910 Zea mays HOM05D004427 ORTHO05D005381 1.4e-34 150.6 228 39.5
AUR62003115 Chenopodium quinoa HOM05D004427 ORTHO05D005381 4.2e-34 149.1 198 40.4
Ah.02g123640 Amaranthus hybridus HOM05D004427 ORTHO05D005381 5.4e-34 148.7 229 36.7
Os11g0102700 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 7.1e-34 148.3 221 40.7
TAR371G1167 Trochodendron aralioides HOM05D004427 ORTHO05D005381 1.6e-33 147.1 229 34.9
EL10Ac8g19614 Beta vulgaris HOM05D004427 ORTHO05D005381 1.3e-32 144.1 269 33.5
DCAR_002673 Daucus carota HOM05D004427 ORTHO05D005381 1.7e-32 143.7 226 34.5
Hund22380 Selenicereus undatus HOM05D004427 ORTHO05D005381 1.7e-32 143.7 234 34.6
Solyc05g005310.3 Solanum lycopersicum HOM05D004427 ORTHO05D005381 1.7e-32 143.7 131 48.9
SMO367G1171 Selaginella moellendorffii HOM05D002435 ORTHO05D002550 6.6e-32 141.7 184 41.3
Pp3c21_14830 Physcomitrium patens HOM05D004427 ORTHO05D005381 8.7e-32 141.4 236 36.4
vmacro14781 Vaccinium macrocarpon HOM05D004427 ORTHO05D005381 1.9e-31 140.2 227 33.9
EL10Ac5g12984 Beta vulgaris HOM05D004427 ORTHO05D005381 4.8e-30 135.6 236 32.6
Lj3A845T93 Lonicera japonica HOM05D004427 ORTHO05D005381 4.8e-30 135.6 212 38.2
DCAR_026152 Daucus carota HOM05D004427 ORTHO05D005381 6.2e-30 135.2 218 36.2
Ah.02g123630 Amaranthus hybridus HOM05D004427 ORTHO05D005381 5.3e-29 132.1 264 32.6
EL10Ac9g22643 Beta vulgaris HOM05D004427 ORTHO05D005381 6.9e-29 131.7 267 30.3
CSS0019084 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 1.5e-28 130.6 219 36.1
CSS0026652 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 3.8e-27 125.9 219 35.6
AUR62032911 Chenopodium quinoa HOM05D004427 ORTHO05D005381 8.4e-27 124.8 254 32.7
Prupe.1G350400 Prunus persica HOM05D004427 ORTHO05D005381 1.4e-26 124.0 151 40.4
DCAR_012615 Daucus carota HOM05D004427 ORTHO05D005381 5.4e-26 122.1 252 32.1
CBR_g4323 Chara braunii HOM05D004427 ORTHO05D005381 9.3e-26 121.3 184 34.8
RcHm_v2.0_Chr4g0447061 Rosa chinensis HOM05D004427 ORTHO05D005381 1.6e-25 120.6 140 43.6
MD00G1127100 Malus domestica HOM05D004427 ORTHO05D005381 6.0e-25 118.6 150 41.3
MCO07G761 Micromonas commoda HOM05D004427 ORTHO05D005381 6.0e-25 118.6 228 31.1
Cre01.g055050 Chlamydomonas reinhardtii HOM05D004427 ORTHO05D005381 2.3e-24 116.7 214 34.1
CSS0032605 Camellia sinensis var. sinensis HOM05D004427 ORTHO05D005381 5.1e-24 115.5 211 35.5
CAN.G682.5 Capsicum annuum HOM05D004427 ORTHO05D005381 6.7e-24 115.2 110 43.6
CDE04G2448 Ceratophyllum demersum HOM05D004427 ORTHO05D005381 6.7e-24 115.2 150 40.7
FvH4_4g37251 Fragaria vesca HOM05D004427 ORTHO05D005381 1.9e-23 113.6 139 40.3
Ah.03g139880 Amaranthus hybridus HOM05D004427 ORTHO05D005381 4.3e-23 112.5 142 39.4
Actinidia09505 Actinidia chinensis HOM05D004427 ORTHO05D005381 2.1e-22 110.2 143 42.0
Lj1C183G2 Lonicera japonica HOM05D004427 ORTHO05D005381 2.1e-22 110.2 102 46.1
FvH4_6g48790 Fragaria vesca HOM05D004427 ORTHO05D005381 2.8e-22 109.8 319 27.6
Os12g0127600 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 2.8e-22 109.8 174 36.2
FAN02G3329 Fragaria x ananassa HOM05D004427 ORTHO05D005381 1.1e-21 107.8 146 42.5
FAN05G2706 Fragaria x ananassa HOM05D004427 ORTHO05D005381 2.4e-21 106.7 146 41.8
Os12g0103580 Oryza sativa ssp. japonica HOM05D004427 ORTHO05D005381 2.0e-20 103.6 216 31.5
Manes.11G140201 Manihot esculenta HOM05D004427 ORTHO05D005381 6.4e-19 98.6 126 46.8
RcHm_v2.0_Chr4g0387651 Rosa chinensis HOM05D028185 ORTHO05D025555 6.0e-17 92.0 153 35.3
FAN12G0369 Fragaria x ananassa HOM05D028185 ORTHO05D025555 6.7e-16 88.6 143 32.2
AUR62037167 Chenopodium quinoa HOM05D004427 ORTHO05D005381 1.5e-15 87.4 77 48.1
FAN17G0248 Fragaria x ananassa HOM05D004427 ORTHO05D025555 2.5e-15 86.7 143 32.9
FAN07G0825 Fragaria x ananassa HOM05D000639 ORTHO05D006731 1.2e-12 77.8 180 27.2
FAN17G0618 Fragaria x ananassa HOM05D000639 ORTHO05D006731 1.5e-12 77.4 110 35.5
FAN09G1397 Fragaria x ananassa HOM05D004427 ORTHO05D005381 5.8e-12 75.5 213 28.2
Cfa026731 Carpinus fangiana HOM05D004427 ORTHO05D005381 6.7e-08 62.0 118 33.1
PRCOL_00006943 Prasinoderma coloniale HOM05D004007 ORTHO05D005127 1.3e-06 57.8 208 25.5


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