Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 1.3e-88 329.7 172 100.0
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 3.0e-88 328.6 172 99.4
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 1.1e-87 326.6 172 98.8
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 1.1e-87 326.6 172 98.8
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 2.5e-87 325.5 172 98.3
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 2.5e-87 325.5 172 98.3
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 2.5e-87 325.5 172 98.8
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 2.5e-87 325.5 172 98.3
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 2.3e-85 318.9 172 96.5
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 2.6e-84 315.5 173 96.5
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 1.3e-83 313.2 172 93.0
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 1.7e-83 312.8 172 92.4
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 5.4e-82 307.8 172 93.0
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 1.2e-81 306.6 174 91.4
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 1.2e-81 306.6 173 91.3
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 1.5e-76 289.7 173 85.5
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 1.3e-72 276.6 172 82.6
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 3.2e-66 255.4 175 76.0
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 6.0e-65 251.1 174 77.0
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 6.0e-65 251.1 174 77.0
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 1.7e-64 249.6 174 76.4
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.7e-64 249.6 174 77.0
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 2.3e-64 249.2 174 76.4
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 1.6e-62 243.0 174 74.7
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.1e-61 240.4 174 74.1
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 1.1e-61 240.4 174 72.4
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 1.4e-61 240.0 179 72.6
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 3.1e-61 238.8 175 72.6
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 3.1e-61 238.8 175 73.7
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 5.2e-61 238.0 175 73.7
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 6.9e-61 237.7 175 73.1
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 9.0e-61 237.3 174 72.4
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 1.5e-60 236.5 174 74.1
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 1.5e-60 236.5 174 72.4
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 2.0e-60 236.1 171 74.3
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 2.0e-60 236.1 175 73.1
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 3.4e-60 235.3 171 73.7
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 3.4e-60 235.3 175 72.6
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 3.4e-60 235.3 174 71.3
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 5.8e-60 234.6 175 73.1
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 5.8e-60 234.6 175 73.1
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 5.8e-60 234.6 175 73.1
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 7.6e-60 234.2 174 71.8
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 9.9e-60 233.8 174 73.0
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 1.3e-59 233.4 174 72.4
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 1.7e-59 233.0 174 73.0
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 2.2e-59 232.6 175 72.0
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 8.4e-59 230.7 175 71.4
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 1.1e-58 230.3 175 72.6
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 1.4e-58 229.9 167 73.7
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 1.4e-58 229.9 175 72.0
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 1.4e-58 229.9 166 74.7
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 1.9e-58 229.6 171 71.9
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 2.4e-58 229.2 175 70.9
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 2.4e-58 229.2 175 72.0
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 2.4e-58 229.2 166 74.7
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 5.4e-58 228.0 175 72.0
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 1.2e-57 226.9 175 70.3
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 1.2e-57 226.9 174 70.7
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 1.2e-57 226.9 176 69.9
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 1.6e-57 226.5 175 69.7
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 2.1e-57 226.1 177 68.9
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 2.7e-57 225.7 175 72.0
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 2.7e-57 225.7 179 70.9
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 3.5e-57 225.3 175 68.0
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 6.0e-57 224.6 152 82.9
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 1.0e-56 223.8 175 70.3
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 1.7e-56 223.0 175 69.1
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 1.7e-56 223.0 174 69.5
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 1.7e-56 223.0 175 69.7
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 3.0e-56 222.2 175 70.9
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 3.9e-56 221.9 175 70.3
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 6.6e-56 221.1 174 69.0
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 1.9e-55 219.5 175 68.0
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 1.9e-55 219.5 174 68.4
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 1.9e-55 219.5 174 68.4
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 1.9e-55 219.5 153 74.5
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 2.5e-55 219.2 175 68.0
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 2.5e-55 219.2 175 68.6
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 2.5e-55 219.2 175 68.0
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 4.3e-55 218.4 174 69.5
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 5.6e-55 218.0 166 70.5
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 2.2e-51 206.1 165 68.5
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 3.8e-51 205.3 165 66.7
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 5.4e-50 201.4 176 65.3
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 7.1e-50 201.1 172 65.7
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 9.3e-50 200.7 168 66.1
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 4.6e-49 198.4 168 64.3
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 3.0e-48 195.7 171 60.8
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 3.0e-48 195.7 141 71.6
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 3.9e-48 195.3 151 72.8
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 5.1e-48 194.9 140 73.6
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 8.7e-48 194.1 153 71.2
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 2.8e-46 189.1 174 60.3
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 9.3e-42 174.1 138 72.5
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 1.2e-41 173.7 174 57.5
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 1.5e-39 166.8 103 90.3
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 2.5e-39 166.0 141 66.7
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 2.1e-38 162.9 178 53.9
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 1.8e-37 159.8 155 63.2
Peaxi162Scf00635g00621 Petunia axillaris HOM05D005631 ORTHO05D006765 9.0e-37 157.5 143 60.8
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 9.0e-37 157.5 117 70.9
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 2.6e-36 156.0 131 67.9
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 4.5e-36 155.2 131 67.9
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 7.6e-36 154.5 173 58.4
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 6.5e-35 151.4 153 58.8
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 1.9e-26 123.2 112 65.2
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 4.2e-26 122.1 115 67.8
AagrBONN_evm.TU.Sc2ySwM_117.69 Anthoceros agrestis HOM05D005631 ORTHO05D006765 1.6e-25 120.2 172 41.9
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 1.1e-23 114.0 65 98.5
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 1.9e-23 113.2 107 62.6
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 2.5e-23 112.8 80 83.8
MCO05G013 Micromonas commoda HOM05D005631 ORTHO05D006765 4.3e-23 112.1 166 44.6
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 7.4e-23 111.3 110 65.5
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 1.3e-22 110.5 65 95.4
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 3.7e-22 109.0 66 95.5
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 8.2e-22 107.8 65 92.3
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 3.1e-21 105.9 65 92.3
A07p13430 Brassica napus HOM05D005631 ORTHO05D006765 9.1e-21 104.4 65 93.8
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 3.6e-17 92.4 107 57.9
C01p12950 Brassica napus HOM05D005631 ORTHO05D006765 4.8e-14 82.0 47 97.9
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 6.3e-14 81.6 68 69.1
BcaC02g08205 Brassica carinata HOM05D005631 ORTHO05D006765 8.2e-14 81.3 49 89.8
C01p13430 Brassica napus HOM05D005631 ORTHO05D006765 1.8e-13 80.1 47 95.7
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 4.1e-13 79.0 90 62.2
C04p57300 Brassica napus HOM05D005631 ORTHO05D006765 6.9e-13 78.2 47 91.5
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 6.9e-13 78.2 60 70.0
Cre01.g044000 Chlamydomonas reinhardtii HOM05D005631 ORTHO05D006765 2.2e-11 73.2 147 39.5
Sabra16G0029400 Salix brachista HOM05D005631 ORTHO05D006765 2.2e-11 73.2 99 54.5
Oeu008088.1 Olea europaea HOM05D005631 ORTHO05D006765 6.5e-11 71.6 83 47.0
CDE02G1786 Ceratophyllum demersum HOM05D005631 ORTHO05D006765 5.5e-10 68.6 122 45.9
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 3.6e-09 65.9 88 58.0
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 1.8e-08 63.5 67 67.2
BcaC02g09329 Brassica carinata HOM05D005631 ORTHO05D006765 2.6e-07 59.7 64 62.5
CBR_g4734 Chara braunii HOM05D005631 ORTHO05D006765 2.6e-07 59.7 106 42.5
Aqoxy1G01289 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 2.2e-06 56.6 50 68.0
Cc05_g02510 Coffea canephora HOM05D005631 ORTHO05D006765 4.8e-06 55.5 109 45.0


User provided reference genes

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