Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p08230 Brassica napus HOM05D000902 ORTHO05D096926 8.8e-51 203.4 106 100.0
C03p19530 Brassica napus HOM05D000902 ORTHO05D000832 4.4e-18 94.7 60 88.3
A03p16600 Brassica napus HOM05D000902 ORTHO05D000832 1.7e-17 92.8 59 88.1
BolC3t14334H Brassica oleracea HOM05D000902 ORTHO05D000832 1.7e-17 92.8 59 88.1
BraA03t10947Z Brassica rapa HOM05D000902 ORTHO05D000832 1.7e-17 92.8 59 88.1
Sp6g12880 Schrenkiella parvula HOM05D000902 ORTHO05D000832 5.4e-16 87.8 59 83.1
BcaB05g24035 Brassica carinata HOM05D000902 ORTHO05D000832 1.6e-15 86.3 59 78.0
Thhalv10012707m.g Eutrema salsugineum HOM05D000902 ORTHO05D000832 1.5e-13 79.7 59 76.3
AL7G28220 Arabidopsis lyrata HOM05D000902 ORTHO05D000832 2.3e-11 72.4 76 59.2
AL8G24940 Arabidopsis lyrata HOM05D000902 ORTHO05D000832 3.1e-11 72.0 59 71.2
AT4G24970 Arabidopsis thaliana HOM05D000902 ORTHO05D000832 5.2e-11 71.2 66 65.2
AT5G50780 Arabidopsis thaliana HOM05D000902 ORTHO05D000832 1.5e-10 69.7 59 66.1
CARHR232370 Cardamine hirsuta HOM05D000902 ORTHO05D000832 2.0e-10 69.3 59 67.8
Aa31LG7G10770 Aethionema arabicum HOM05D000902 ORTHO05D000832 1.3e-09 66.6 58 67.2
Sp7g22960 Schrenkiella parvula HOM05D000902 ORTHO05D000832 1.7e-09 66.2 59 62.7
Carub.0007s1608 Capsella rubella HOM05D000902 ORTHO05D000832 3.8e-09 65.1 59 64.4
BcaNung03985 Brassica carinata HOM05D000902 ORTHO05D000832 4.9e-09 64.7 59 61.0
A01p16260 Brassica napus HOM05D000902 ORTHO05D000832 8.4e-09 63.9 59 61.0
Carub.0008s1068 Capsella rubella HOM05D000902 ORTHO05D000832 8.4e-09 63.9 59 64.4
BcaC09g50827 Brassica carinata HOM05D000902 ORTHO05D000832 1.4e-08 63.2 59 61.0
BraA01t01563Z Brassica rapa HOM05D000902 ORTHO05D000832 1.4e-08 63.2 59 61.0
BcaNung03989 Brassica carinata HOM05D000902 ORTHO05D000832 1.9e-08 62.8 59 61.0
C01p20260 Brassica napus HOM05D000902 ORTHO05D000832 1.9e-08 62.8 59 61.0
BolC1t01956H Brassica oleracea HOM05D000902 ORTHO05D000832 1.9e-08 62.8 59 61.0
Cpa.g.sc4.155 Carica papaya HOM05D000902 ORTHO05D000832 1.9e-08 62.8 57 59.6
Thhalv10024553m.g Eutrema salsugineum HOM05D000902 ORTHO05D000832 2.4e-08 62.4 59 62.7
BcaC06g32845 Brassica carinata HOM05D000902 ORTHO05D000832 7.1e-08 60.8 59 57.6
Glyma.05G202900 Glycine max HOM05D000902 ORTHO05D000832 2.1e-07 59.3 58 56.9
SGA_v2.0_scaffold188G40336 Striga asiatica HOM05D000902 ORTHO05D000832 2.1e-07 59.3 85 49.4
CANSAT80G0625 Cannabis sativa HOM05D000902 ORTHO05D000832 3.5e-07 58.5 57 54.4
MBI07_g24742_MAGBIO Magnolia biondii HOM05D000902 ORTHO05D000832 3.5e-07 58.5 65 53.8
Atru.chr12.2337 Acer truncatum HOM05D000902 ORTHO05D000832 4.6e-07 58.2 63 50.8
ClCG06G018110 Citrullus lanatus HOM05D000902 ORTHO05D000832 4.6e-07 58.2 57 57.9
Lj4g0027865 Lotus japonicus HOM05D000902 ORTHO05D000832 4.6e-07 58.2 57 54.4
Atru.chr6.1870 Acer truncatum HOM05D000902 ORTHO05D000832 1.0e-06 57.0 61 52.5
Cc04_g09610 Coffea canephora HOM05D000902 ORTHO05D000832 1.0e-06 57.0 57 57.9
TWI14G0729 Tripterygium wilfordii HOM05D000902 ORTHO05D000832 1.3e-06 56.6 59 50.8
Dinv11201 Davidia involucrata HOM05D000902 ORTHO05D000832 1.7e-06 56.2 56 57.1
Hund02463 Selenicereus undatus HOM05D000902 ORTHO05D000832 1.7e-06 56.2 55 58.2
Lj5C92G16 Lonicera japonica HOM05D000902 ORTHO05D013400 2.3e-06 55.8 56 57.1
GSVIVG01008587001 Vitis vinifera HOM05D000902 ORTHO05D000832 2.3e-06 55.8 58 55.2
Glyma.08G010300 Glycine max HOM05D000902 ORTHO05D000832 3.0e-06 55.5 57 54.4
Thecc.03G134800 Theobroma cacao HOM05D000902 ORTHO05D000832 3.0e-06 55.5 56 55.4
CDE05G3380 Ceratophyllum demersum HOM05D000902 ORTHO05D013400 5.1e-06 54.7 81 43.2
Ciclev10030712m.g Citrus clementina HOM05D000902 ORTHO05D000832 6.6e-06 54.3 69 49.3
Potri.015G100900 Populus trichocarpa HOM05D000902 ORTHO05D000832 6.6e-06 54.3 47 66.0
TAR371G0242 Trochodendron aralioides HOM05D000902 ORTHO05D000832 6.6e-06 54.3 56 51.8
Lsat_1_v5_gn_5_10920 Lactuca sativa HOM05D000902 ORTHO05D000832 8.6e-06 53.9 56 53.6
Lalb_Chr13g0297161 Lupinus albus HOM05D000902 ORTHO05D000832 8.6e-06 53.9 57 50.9
Manes.14G048300 Manihot esculenta HOM05D000902 ORTHO05D000832 8.6e-06 53.9 62 54.8
Nn4g22232 Nelumbo nucifera HOM05D000902 ORTHO05D000832 8.6e-06 53.9 61 47.5
Sabra15G0121300 Salix brachista HOM05D000902 ORTHO05D000832 8.6e-06 53.9 45 66.7


User provided reference genes

Program Settings