Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p01680 Brassica napus HOM05D000921 ORTHO05D004153 6.9e-156 553.9 275 100.0
BraA10t42445Z Brassica rapa HOM05D000921 ORTHO05D004153 8.4e-154 547.0 270 100.0
C05p01680 Brassica napus HOM05D000921 ORTHO05D004153 7.1e-153 543.9 270 99.3
BolC5t28947H Brassica oleracea HOM05D000921 ORTHO05D004153 7.1e-153 543.9 270 99.3
Sp1g02060 Schrenkiella parvula HOM05D000921 ORTHO05D004153 4.3e-150 534.6 270 97.4
BolC8t52810H Brassica oleracea HOM05D000921 ORTHO05D004153 9.0e-148 526.9 270 95.6
Thhalv10006519m.g Eutrema salsugineum HOM05D000921 ORTHO05D004153 9.0e-148 526.9 270 95.6
C08p52940 Brassica napus HOM05D000921 ORTHO05D004153 2.0e-147 525.8 270 95.6
AL1G12520 Arabidopsis lyrata HOM05D000921 ORTHO05D004153 2.6e-147 525.4 270 95.2
AT1G03060 Arabidopsis thaliana HOM05D000921 ORTHO05D004153 4.5e-147 524.6 270 94.8
A09p68370 Brassica napus HOM05D000921 ORTHO05D004153 4.5e-147 524.6 270 95.6
BraA09t42173Z Brassica rapa HOM05D000921 ORTHO05D004153 4.5e-147 524.6 270 95.6
CARHR002410 Cardamine hirsuta HOM05D000921 ORTHO05D004153 4.5e-147 524.6 270 95.2
Aa31LG1G9470 Aethionema arabicum HOM05D000921 ORTHO05D004153 1.6e-144 516.2 272 92.3
BcaC07g42269 Brassica carinata HOM05D000921 ORTHO05D004153 1.3e-138 496.5 270 91.5
THA.LOC104825985 Tarenaya hassleriana HOM05D000921 ORTHO05D004153 1.6e-136 489.6 272 86.8
Carub.0001s0220 Capsella rubella HOM05D000921 ORTHO05D004153 2.4e-132 475.7 270 87.4
AT4G02660 Arabidopsis thaliana HOM05D000921 ORTHO05D004153 1.5e-129 466.5 272 82.7
Carub.0006s3446 Capsella rubella HOM05D000921 ORTHO05D004153 3.6e-128 461.8 272 81.2
AL6G50380 Arabidopsis lyrata HOM05D000921 ORTHO05D004153 4.7e-128 461.5 272 82.4
BcaB01g02481 Brassica carinata HOM05D000921 ORTHO05D004153 1.1e-124 450.3 271 80.1
Sp6g02580 Schrenkiella parvula HOM05D000921 ORTHO05D004153 5.3e-124 448.0 272 80.9
Potri.005G215400 Populus trichocarpa HOM05D000921 ORTHO05D004153 4.7e-120 434.9 267 77.2
A03p30920 Brassica napus HOM05D000921 ORTHO05D004153 4.0e-119 431.8 272 77.6
Sabra05G0164600 Salix brachista HOM05D000921 ORTHO05D004153 1.5e-118 429.9 270 76.3
COL.COLO4_09186 Corchorus olitorius HOM05D000921 ORTHO05D004153 4.4e-118 428.3 267 77.2
Sabra02G0038900 Salix brachista HOM05D000921 ORTHO05D004153 4.4e-118 428.3 270 75.2
TWI12G1077 Tripterygium wilfordii HOM05D000921 ORTHO05D004153 2.2e-117 426.0 270 74.1
CSS0032745 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004153 4.8e-117 424.9 272 74.3
Peaxi162Scf00259g00414 Petunia axillaris HOM05D000921 ORTHO05D004153 1.4e-116 423.3 270 73.7
CAN.G1072.6 Capsicum annuum HOM05D000921 ORTHO05D004153 3.1e-116 422.2 267 74.5
Manes.01G203800 Manihot esculenta HOM05D000921 ORTHO05D004153 7.7e-115 417.5 267 74.9
TAR633G0413 Trochodendron aralioides HOM05D000921 ORTHO05D004153 2.2e-114 416.0 270 72.6
Oeu002269.1 Olea europaea HOM05D000921 ORTHO05D004153 5.0e-114 414.8 270 71.5
CSS0010203 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004153 6.5e-114 414.5 262 73.7
Sopen09g027450 Solanum pennellii HOM05D000921 ORTHO05D004153 6.5e-114 414.5 266 74.1
PGR044G0864 Punica granatum HOM05D000921 ORTHO05D004153 1.1e-113 413.7 268 72.8
Cc01_g18990 Coffea canephora HOM05D000921 ORTHO05D004153 1.5e-113 413.3 270 71.1
Solyc09g065700.3 Solanum lycopersicum HOM05D000921 ORTHO05D004153 1.5e-113 413.3 266 73.7
Migut.D00355 Erythranthe guttata HOM05D000921 ORTHO05D004153 4.2e-113 411.8 270 71.9
Medtr1g071260 Medicago truncatula HOM05D000921 ORTHO05D004153 4.2e-113 411.8 270 73.3
CSS0042369 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004153 5.5e-113 411.4 262 73.3
Lj1C56G6 Lonicera japonica HOM05D000921 ORTHO05D004153 1.0e-111 407.1 266 71.4
SalBow4G3326 Salvia bowleyana HOM05D000921 ORTHO05D004153 1.8e-111 406.4 266 71.4
ClCG09G007420 Citrullus lanatus HOM05D000921 ORTHO05D004153 4.0e-111 405.2 267 72.7
Duzib133G0456 Durio zibethinus HOM05D000921 ORTHO05D004153 6.8e-111 404.4 270 72.6
Sed0015319 Sechium edule HOM05D000921 ORTHO05D004153 2.0e-110 402.9 268 72.4
BraA03t12271Z Brassica rapa HOM05D000921 ORTHO05D004153 1.7e-109 399.8 272 72.8
CsaV3_7G027700 Cucumis sativus L. HOM05D000921 ORTHO05D004153 2.2e-109 399.4 267 71.5
Lj2C1164G7 Lonicera japonica HOM05D000921 ORTHO05D004153 3.7e-109 398.7 272 68.4
unitig_61.g26264 Utricularia gibba HOM05D000921 ORTHO05D004153 6.3e-109 397.9 273 67.8
MSTRG.21525 Avicennia marina HOM05D000921 ORTHO05D004153 1.1e-108 397.1 267 70.4
CARHR250960 Cardamine hirsuta HOM05D000921 ORTHO05D004153 1.1e-108 397.1 273 72.2
Hund02865 Selenicereus undatus HOM05D000921 ORTHO05D004153 3.1e-108 395.6 267 71.9
Nn6g33594 Nelumbo nucifera HOM05D000921 ORTHO05D004153 4.1e-108 395.2 270 70.0
Eucgr.K03323 Eucalyptus grandis HOM05D000921 ORTHO05D004153 7.0e-108 394.4 270 70.0
C03p37700 Brassica napus HOM05D000921 ORTHO05D004153 1.0e-106 390.6 271 72.0
BolC3t16059H Brassica oleracea HOM05D000921 ORTHO05D004153 1.0e-106 390.6 271 72.0
TWI18G0154 Tripterygium wilfordii HOM05D000921 ORTHO05D004153 2.9e-106 389.0 270 68.5
Ciclev10018426m.g Citrus clementina HOM05D000921 ORTHO05D004153 8.6e-106 387.5 272 68.8
BcaC01g06740 Brassica carinata HOM05D000921 ORTHO05D004153 1.5e-105 386.7 272 71.3
HanXRQChr04g0113931 Helianthus annuus HOM05D000921 ORTHO05D004153 1.5e-105 386.7 270 68.1
Dinv22500 Davidia involucrata HOM05D000921 ORTHO05D004153 2.5e-105 386.0 270 69.6
HanXRQChr01g0005671 Helianthus annuus HOM05D000921 ORTHO05D004153 3.3e-105 385.6 271 68.3
CDE04G2373 Ceratophyllum demersum HOM05D000921 ORTHO05D004153 5.5e-105 384.8 267 67.0
ECA248G3113 Erigeron canadensis HOM05D000921 ORTHO05D004153 7.2e-105 384.4 271 68.6
Gohir.A08G187300 Gossypium hirsutum HOM05D000921 ORTHO05D004153 1.6e-104 383.3 260 69.2
Cpa.g.sc52.121 Carica papaya HOM05D000921 ORTHO05D004153 2.8e-104 382.5 270 69.3
Gohir.D08G205600 Gossypium hirsutum HOM05D000921 ORTHO05D004153 2.8e-104 382.5 260 69.2
Atru.chr5.1523 Acer truncatum HOM05D000921 ORTHO05D004153 6.1e-104 381.3 271 70.1
ECA236G3737 Erigeron canadensis HOM05D000921 ORTHO05D004153 6.1e-104 381.3 270 68.1
SGA_v2.0_scaffold1G00535 Striga asiatica HOM05D000921 ORTHO05D004153 1.8e-103 379.8 279 64.9
Gorai.004G217600 Gossypium raimondii HOM05D000921 ORTHO05D004153 2.3e-103 379.4 260 68.5
Hund09551 Selenicereus undatus HOM05D000921 ORTHO05D004153 8.9e-103 377.5 267 67.8
Lsat_1_v5_gn_8_93941 Lactuca sativa HOM05D000921 ORTHO05D004153 1.2e-102 377.1 272 67.6
Rhsim13G0028700 Rhododendron simsii HOM05D000921 ORTHO05D004153 2.0e-102 376.3 270 66.7
Thecc.01G271200 Theobroma cacao HOM05D000921 ORTHO05D004153 2.6e-102 375.9 270 68.9
vmacro02613 Vaccinium macrocarpon HOM05D000921 ORTHO05D004153 7.5e-102 374.4 268 67.2
Cfa006203 Carpinus fangiana HOM05D000921 ORTHO05D004153 1.7e-101 373.2 270 68.1
Duzib138G1896 Durio zibethinus HOM05D000921 ORTHO05D004153 1.1e-100 370.5 270 67.4
Dinv32883 Davidia involucrata HOM05D000921 ORTHO05D004153 1.4e-100 370.2 270 66.7
Actinidia19962 Actinidia chinensis HOM05D000921 ORTHO05D004153 1.8e-100 369.8 268 66.8
QL12p042334 Quercus lobata HOM05D000921 ORTHO05D004153 1.8e-100 369.8 270 66.3
Haze_04641 Corylus avellana HOM05D000921 ORTHO05D004153 2.4e-100 369.4 270 67.4
HanXRQChr06g0177821 Helianthus annuus HOM05D000921 ORTHO05D004153 3.2e-100 369.0 271 65.3
Ca_09726_v3 Cicer arietinum L. HOM05D000921 ORTHO05D004153 9.2e-100 367.5 270 66.7
Potri.002G047700 Populus trichocarpa HOM05D000921 ORTHO05D004153 2.0e-99 366.3 271 67.2
CANSAT25G1208 Cannabis sativa HOM05D000921 ORTHO05D004153 3.5e-99 365.5 270 66.3
CiPaw.07G086700 Carya illinoinensis HOM05D000921 ORTHO05D004153 3.5e-99 365.5 267 65.2
Lj5g0027434 Lotus japonicus HOM05D000921 ORTHO05D004153 4.6e-99 365.2 270 66.3
MD03G1257800 Malus domestica HOM05D000921 ORTHO05D004153 1.0e-98 364.0 270 65.9
Glyma.10G030000 Glycine max HOM05D000921 ORTHO05D004153 2.9e-98 362.5 270 67.0
Gohir.D11G131000 Gossypium hirsutum HOM05D000921 ORTHO05D004153 2.9e-98 362.5 270 66.3
MD11G1278500 Malus domestica HOM05D000921 ORTHO05D004153 2.9e-98 362.5 270 65.6
Gorai.007G140000 Gossypium raimondii HOM05D000921 ORTHO05D004153 3.9e-98 362.1 270 66.3
TPR.G34892 Trifolium pratense HOM05D000921 ORTHO05D004153 3.9e-98 362.1 270 66.3
Psat6g058840 Pisum sativum HOM05D000921 ORTHO05D004153 8.6e-98 360.9 271 64.9
Glyma.02G144200 Glycine max HOM05D000921 ORTHO05D004153 1.1e-97 360.5 270 66.7
Gohir.A11G125600 Gossypium hirsutum HOM05D000921 ORTHO05D004153 1.5e-97 360.1 270 65.9
Os03g0744650 Oryza sativa ssp. japonica HOM05D000921 ORTHO05D004153 1.5e-97 360.1 268 62.7
Aqoxy5G00390 Aquilegia oxysepala HOM05D000921 ORTHO05D004153 3.3e-97 359.0 270 63.7
Prupe.8G234500 Prunus persica HOM05D000921 ORTHO05D004153 3.3e-97 359.0 270 64.4
Lsat_1_v5_gn_5_185441 Lactuca sativa HOM05D000921 ORTHO05D004153 4.3e-97 358.6 273 64.1
Lalb_Chr06g0162771 Lupinus albus HOM05D000921 ORTHO05D004153 4.3e-97 358.6 267 65.2
arahy.Tifrunner.gnm1.ann1.BT7PUB Arachis hypogaea HOM05D000921 ORTHO05D004153 7.3e-97 357.8 270 64.8
arahy.Tifrunner.gnm1.ann1.EGZY1N Arachis hypogaea HOM05D000921 ORTHO05D004153 7.3e-97 357.8 270 64.8
Phvul.007G175300 Phaseolus vulgaris HOM05D000921 ORTHO05D004153 7.3e-97 357.8 270 66.3
RcHm_v2.0_Chr6g0289881 Rosa chinensis HOM05D000921 ORTHO05D004153 9.5e-97 357.5 266 65.8
SEGI_14501 Sequoiadendron giganteum HOM05D000921 ORTHO05D004153 2.8e-96 355.9 277 62.5
PSO210G1924 Papaver somniferum HOM05D000921 ORTHO05D004153 3.6e-96 355.5 266 64.7
FAN20G3205 Fragaria x ananassa HOM05D000921 ORTHO05D004153 1.8e-95 353.2 266 64.7
FAN24G0847 Fragaria x ananassa HOM05D000921 ORTHO05D004153 4.0e-95 352.1 266 64.3
EL10Ac5g10491 Beta vulgaris HOM05D000921 ORTHO05D004153 6.8e-95 351.3 267 65.5
Ah.11g050210 Amaranthus hybridus HOM05D000921 ORTHO05D004153 1.2e-94 350.5 267 65.5
CDE10G0462 Ceratophyllum demersum HOM05D000921 ORTHO05D004153 1.2e-94 350.5 270 63.3
FvH4_2g22920 Fragaria vesca HOM05D000921 ORTHO05D004153 1.2e-94 350.5 265 64.2
FAN15G1223 Fragaria x ananassa HOM05D000921 ORTHO05D004153 3.4e-94 349.0 266 63.5
ATR0665G073 Amborella trichopoda HOM05D000921 ORTHO05D004153 7.5e-94 347.8 276 59.8
DCAR_002700 Daucus carota HOM05D000921 ORTHO05D004153 4.9e-93 345.1 266 62.4
Gohir.A08G045265 Gossypium hirsutum HOM05D000921 ORTHO05D004153 6.4e-93 344.7 266 63.9
Nn1g00513 Nelumbo nucifera HOM05D000921 ORTHO05D004153 1.1e-92 344.0 270 62.6
AUR62032282 Chenopodium quinoa HOM05D000921 ORTHO05D004153 1.4e-92 343.6 267 64.0
Lalb_Chr01g0019981 Lupinus albus HOM05D000921 ORTHO05D004153 1.9e-92 343.2 270 62.6
Gohir.D08G055600 Gossypium hirsutum HOM05D000921 ORTHO05D004153 4.1e-92 342.0 266 63.2
Gorai.004G056400 Gossypium raimondii HOM05D000921 ORTHO05D004153 7.0e-92 341.3 266 63.2
AUR62011970 Chenopodium quinoa HOM05D000921 ORTHO05D004153 1.2e-91 340.5 267 62.9
SHI10018 Sapria himalayana HOM05D000921 ORTHO05D004153 1.6e-91 340.1 270 60.7
Mapoly0082s0083 Marchantia polymorpha HOM05D000921 ORTHO05D004153 7.3e-89 331.3 295 54.2
GSVIVG01003123001 Vitis vinifera HOM05D000921 ORTHO05D004153 9.5e-89 330.9 202 76.2
Pp3c5_2890 Physcomitrium patens HOM05D000921 ORTHO05D004153 7.5e-86 321.2 270 58.1
Pp3c5_2897 Physcomitrium patens HOM05D000921 ORTHO05D004153 7.5e-86 321.2 270 58.1
PSO461G0055 Papaver somniferum HOM05D000921 ORTHO05D004153 3.7e-85 318.9 264 58.3
FAN27G2160 Fragaria x ananassa HOM05D000921 ORTHO05D004153 6.4e-85 318.2 211 70.6
Zm00001eb056940 Zea mays HOM05D000921 ORTHO05D004153 6.4e-85 318.2 268 57.5
SMO236G0048 Selaginella moellendorffii HOM05D000921 ORTHO05D004153 2.4e-84 316.2 276 58.0
Pp3c6_26100 Physcomitrium patens HOM05D000921 ORTHO05D004153 2.1e-83 313.2 268 56.7
AagrBONN_evm.TU.Sc2ySwM_117.1900 Anthoceros agrestis HOM05D000921 ORTHO05D004153 3.4e-78 295.8 287 50.5
Pp3c16_11700 Physcomitrium patens HOM05D000921 ORTHO05D004153 1.7e-74 283.5 304 48.4
Pp3c16_11705 Physcomitrium patens HOM05D000921 ORTHO05D004153 1.7e-74 283.5 304 48.4
Pp3c6_5700 Physcomitrium patens HOM05D000921 ORTHO05D004153 5.1e-74 282.0 301 47.8
Pp3c6_5706 Physcomitrium patens HOM05D000921 ORTHO05D004153 5.1e-74 282.0 301 47.8
CBR_g29440 Chara braunii HOM05D000921 ORTHO05D004153 5.1e-58 228.8 299 39.1
FAN20G0191 Fragaria x ananassa HOM05D000921 ORTHO05D004153 3.3e-41 172.9 258 40.3
Ah.02g111300 Amaranthus hybridus HOM05D000179 ORTHO05D000064 4.6e-27 125.9 151 47.7
Sc05g0001320 Simmondsia chinensis HOM05D000921 ORTHO05D004153 1.0e-26 124.8 83 68.7
HPP92_021299 Vanilla planifolia HOM05D000921 ORTHO05D004153 1.2e-22 111.3 161 41.6
Haze_26709 Corylus avellana HOM05D000921 ORTHO05D004153 1.3e-16 91.3 201 31.8
Cfa021767 Carpinus fangiana HOM05D000921 ORTHO05D004153 2.1e-11 73.9 189 28.0
Medtr1g097140 Medicago truncatula HOM05D003913 ORTHO05D004803 1.1e-07 61.6 168 22.6
Nn5g27419 Nelumbo nucifera HOM05D000921 ORTHO05D002852 1.4e-07 61.2 45 71.1
Phvul.009G035500 Phaseolus vulgaris HOM05D000921 ORTHO05D004782 3.5e-06 56.6 148 30.4
SMO169G0086 Selaginella moellendorffii HOM05D000921 ORTHO05D004782 3.5e-06 56.6 93 33.3
Glyma.04G096100 Glycine max HOM05D000921 ORTHO05D004782 4.5e-06 56.2 148 30.4
Lalb_Chr23g0270001 Lupinus albus HOM05D000921 ORTHO05D004782 5.9e-06 55.8 148 30.4
arahy.Tifrunner.gnm1.ann1.YNEA8K Arachis hypogaea HOM05D000921 ORTHO05D004782 7.7e-06 55.5 148 30.4
FvH4_3g29280 Fragaria vesca HOM05D001335 ORTHO05D001184 7.7e-06 55.5 85 32.9
Lj1g0023313 Lotus japonicus HOM05D000921 ORTHO05D004782 7.7e-06 55.5 148 31.1


User provided reference genes

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