Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p57580 Brassica napus HOM05D004390 ORTHO05D004950 1.5e-43 179.1 90 100.0
BraA09t41150Z Brassica rapa HOM05D004390 ORTHO05D004950 4.4e-43 177.6 90 97.8
C08p40770 Brassica napus HOM05D004390 ORTHO05D004950 1.9e-41 172.2 90 94.4
BcaC07g41074 Brassica carinata HOM05D004390 ORTHO05D004950 1.6e-40 169.1 90 93.3
BolC8t51641H Brassica oleracea HOM05D004390 ORTHO05D004950 1.6e-40 169.1 90 93.3
SpUn0131_0010 Schrenkiella parvula HOM05D004390 ORTHO05D004950 2.3e-39 165.2 93 89.2
CARHR113610 Cardamine hirsuta HOM05D004390 ORTHO05D004950 2.5e-38 161.8 92 87.0
AT2G22425 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 7.3e-38 160.2 93 86.0
Carub.0004s0159 Capsella rubella HOM05D004390 ORTHO05D004950 9.5e-38 159.8 92 88.0
Thhalv10000378m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 9.5e-38 159.8 93 88.2
AL4G11930 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 1.6e-37 159.1 93 86.0
BcaB08g35066 Brassica carinata HOM05D004390 ORTHO05D004950 1.6e-37 159.1 93 86.0
Aa31LG7G14400 Aethionema arabicum HOM05D004390 ORTHO05D004950 6.2e-37 157.1 92 84.8
Aa31LG7G15420 Aethionema arabicum HOM05D004390 ORTHO05D004950 8.0e-37 156.8 92 83.7
Carub.0007s0202 Capsella rubella HOM05D004390 ORTHO05D004950 2.2e-34 148.7 93 80.6
Thhalv10027263m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 6.4e-34 147.1 92 79.3
AL7G12360 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 1.1e-33 146.4 93 78.5
BolC1t00106H Brassica oleracea HOM05D004390 ORTHO05D004950 3.2e-33 144.8 92 78.3
A01p00960 Brassica napus HOM05D004390 ORTHO05D004950 9.2e-33 143.3 92 77.2
BraA01t00094Z Brassica rapa HOM05D004390 ORTHO05D004950 9.2e-33 143.3 92 77.2
CARHR246620 Cardamine hirsuta HOM05D004390 ORTHO05D004950 9.2e-33 143.3 91 78.0
Sp7g35820 Schrenkiella parvula HOM05D004390 ORTHO05D004950 1.2e-32 142.9 92 78.3
THA.LOC104824895 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.1e-32 142.1 92 76.1
BcaNung00935 Brassica carinata HOM05D004390 ORTHO05D004950 2.7e-32 141.7 92 76.1
THA.LOC104824898 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 7.8e-32 140.2 92 75.0
Aa31LG6G15170 Aethionema arabicum HOM05D004390 ORTHO05D004950 1.0e-31 139.8 92 75.0
THA.LOC104824890 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 3.0e-31 138.3 92 72.8
THA.LOC104824892 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 3.0e-31 138.3 92 71.7
THA.LOC104824896 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 3.0e-31 138.3 92 71.7
THA.LOC109116235 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 8.6e-31 136.7 79 79.7
AT4G40042 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 1.9e-30 135.6 81 79.0
Cpa.g.sc34.218 Carica papaya HOM05D004390 ORTHO05D004950 4.3e-30 134.4 92 70.7
Sabra08G0134000 Salix brachista HOM05D004390 ORTHO05D004950 7.3e-30 133.7 95 69.5
Dinv14827 Davidia involucrata HOM05D001171 ORTHO05D001872 9.5e-30 133.3 93 71.0
ECA233G0624 Erigeron canadensis HOM05D004390 ORTHO05D004950 1.2e-29 132.9 89 69.7
ECA240G0924 Erigeron canadensis HOM05D004390 ORTHO05D004950 1.2e-29 132.9 89 69.7
Lsat_1_v5_gn_8_149361 Lactuca sativa HOM05D004390 ORTHO05D004950 1.6e-29 132.5 94 67.0
Duzib248G1577 Durio zibethinus HOM05D004390 ORTHO05D004950 2.1e-29 132.1 92 67.4
Manes.12G012800 Manihot esculenta HOM05D004390 ORTHO05D004950 3.6e-29 131.3 93 69.9
CSS0024228 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 6.2e-29 130.6 93 68.8
TWI18G1082 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 6.2e-29 130.6 92 71.7
Nn3g16498 Nelumbo nucifera HOM05D004390 ORTHO05D004950 8.1e-29 130.2 89 68.5
Lj7E465T0 Lonicera japonica HOM05D004390 ORTHO05D004950 1.1e-28 129.8 93 69.9
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 1.1e-28 129.8 94 66.0
Potri.008G175775 Populus trichocarpa HOM05D004390 ORTHO05D004950 1.1e-28 129.8 95 69.5
Prupe.1G228300 Prunus persica HOM05D004390 ORTHO05D004950 1.1e-28 129.8 94 68.1
Nitab4.5_0000367g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 1.4e-28 129.4 93 66.7
Nitab4.5_0000379g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 1.4e-28 129.4 93 66.7
CANSAT80G1060 Cannabis sativa HOM05D004390 ORTHO05D004950 1.8e-28 129.0 92 66.3
Cfa009329 Carpinus fangiana HOM05D004390 ORTHO05D004950 1.8e-28 129.0 91 68.1
Gorai.008G164900 Gossypium raimondii HOM05D004390 ORTHO05D004950 1.8e-28 129.0 91 65.9
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 2.3e-28 128.6 89 69.7
Eucgr.B03484 Eucalyptus grandis HOM05D004390 ORTHO05D004950 2.3e-28 128.6 95 68.4
Gohir.D01G154700 Gossypium hirsutum HOM05D004390 ORTHO05D004950 2.3e-28 128.6 92 65.2
Gorai.002G191500 Gossypium raimondii HOM05D004390 ORTHO05D004950 2.3e-28 128.6 92 65.2
HanXRQChr08g0207731 Helianthus annuus HOM05D004390 ORTHO05D004950 2.3e-28 128.6 93 66.7
Hma1.2p1_0065F.1_g035640 Hydrangea macrophylla HOM05D004390 ORTHO05D004950 2.3e-28 128.6 93 68.8
Thecc.02G210700 Theobroma cacao HOM05D004390 ORTHO05D004950 2.3e-28 128.6 92 67.4
Actinidia08077 Actinidia chinensis HOM05D001171 ORTHO05D001872 3.1e-28 128.3 93 68.8
Actinidia20702 Actinidia chinensis HOM05D004390 ORTHO05D004950 3.1e-28 128.3 93 69.9
CSS0004094 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 3.1e-28 128.3 94 68.1
CSS0048605 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 3.1e-28 128.3 94 68.1
Ca_18042_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 3.1e-28 128.3 94 66.0
FvH4_4g23930 Fragaria vesca HOM05D004390 ORTHO05D004950 4.0e-28 127.9 89 66.3
FAN12G2113 Fragaria x ananassa HOM05D006059 ORTHO05D004950 4.0e-28 127.9 89 66.3
TWI75G0215 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 4.0e-28 127.9 92 70.7
Actinidia09657 Actinidia chinensis HOM05D004390 ORTHO05D004950 5.2e-28 127.5 93 68.8
CARHR089330 Cardamine hirsuta HOM05D004390 ORTHO05D004950 5.2e-28 127.5 80 72.5
CiPaw.06G101400 Carya illinoinensis HOM05D004390 ORTHO05D004950 5.2e-28 127.5 90 70.0
MELO3C011874.2 Cucumis melo HOM05D004390 ORTHO05D004950 5.2e-28 127.5 94 68.1
FAN07G0791 Fragaria x ananassa HOM05D004390 ORTHO05D004950 5.2e-28 127.5 89 65.2
FAN17G1207 Fragaria x ananassa HOM05D004390 ORTHO05D004950 5.2e-28 127.5 89 65.2
FAN22G0688 Fragaria x ananassa HOM05D004390 ORTHO05D004950 5.2e-28 127.5 89 65.2
QL03p053718 Quercus lobata HOM05D004390 ORTHO05D004950 5.2e-28 127.5 93 67.7
Haze_10374 Corylus avellana HOM05D004390 ORTHO05D004950 6.8e-28 127.1 92 68.5
Gohir.D12G152500 Gossypium hirsutum HOM05D004390 ORTHO05D004950 6.8e-28 127.1 92 65.2
ClCG11G013760 Citrullus lanatus HOM05D004390 ORTHO05D004950 8.9e-28 126.7 95 67.4
arahy.Tifrunner.gnm1.ann1.FA6GLZ Arachis hypogaea HOM05D004390 ORTHO05D004950 1.2e-27 126.3 89 68.5
Peaxi162Scf00128g01124 Petunia axillaris HOM05D004390 ORTHO05D004950 1.2e-27 126.3 92 66.3
PGR102G2095 Punica granatum HOM05D004390 ORTHO05D004950 1.2e-27 126.3 89 69.7
Aqoxy5G03398 Aquilegia oxysepala HOM05D004390 ORTHO05D004950 1.5e-27 125.9 89 67.4
CsaV3_5G030350 Cucumis sativus L. HOM05D004390 ORTHO05D004950 1.5e-27 125.9 94 67.0
Medtr3g085510 Medicago truncatula HOM05D004390 ORTHO05D004950 1.5e-27 125.9 94 67.0
Psat5g095200 Pisum sativum HOM05D004390 ORTHO05D004950 1.5e-27 125.9 94 66.0
Potri.010G059300 Populus trichocarpa HOM05D004390 ORTHO05D004950 1.5e-27 125.9 94 69.1
TWI36G1003 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 1.5e-27 125.9 92 69.6
Migut.E00025 Erythranthe guttata HOM05D004390 ORTHO05D004950 2.0e-27 125.6 92 65.2
Thhalv10021836m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 2.0e-27 125.6 88 68.2
Gohir.A01G155400 Gossypium hirsutum HOM05D004390 ORTHO05D004950 2.0e-27 125.6 92 64.1
Nitab4.5_0002210g0100 Nicotiana tabacum HOM05D004390 ORTHO05D004950 2.0e-27 125.6 93 66.7
Hund25458 Selenicereus undatus HOM05D004390 ORTHO05D004950 2.0e-27 125.6 92 65.2
arahy.Tifrunner.gnm1.ann1.L53BL2 Arachis hypogaea HOM05D004390 ORTHO05D004950 2.6e-27 125.2 89 66.3
Glyma.11G249600 Glycine max HOM05D004390 ORTHO05D004950 2.6e-27 125.2 94 63.8
Gohir.A12G148600 Gossypium hirsutum HOM05D004390 ORTHO05D004950 2.6e-27 125.2 85 64.7
Lj4g0026719 Lotus japonicus HOM05D004390 ORTHO05D004950 2.6e-27 125.2 94 67.0
Psat4g014960 Pisum sativum HOM05D004390 ORTHO05D004950 2.6e-27 125.2 94 64.9
Phvul.001G260900 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 3.4e-27 124.8 94 62.8
Atru.chr11.2308 Acer truncatum HOM05D004390 ORTHO05D004950 4.4e-27 124.4 92 69.6
COL.COLO4_20382 Corchorus olitorius HOM05D001171 ORTHO05D001872 4.4e-27 124.4 93 64.5
TAR371G0820 Trochodendron aralioides HOM05D004390 ORTHO05D004950 4.4e-27 124.4 85 68.2
Cc09_g06290 Coffea canephora HOM05D015856 ORTHO05D004950 5.8e-27 124.0 92 66.3
Nn4g22350 Nelumbo nucifera HOM05D004390 ORTHO05D004950 5.8e-27 124.0 85 68.2
Os12g0438900 Oryza sativa ssp. japonica HOM05D004390 ORTHO05D004950 5.8e-27 124.0 82 67.1
Sed0024223 Sechium edule HOM05D004390 ORTHO05D004950 7.5e-27 123.6 94 66.0
EL10Ac6g13484 Beta vulgaris HOM05D004390 ORTHO05D004950 9.9e-27 123.2 89 66.3
Rhsim10G0039200 Rhododendron simsii HOM05D004390 ORTHO05D004950 9.9e-27 123.2 91 64.8
GSVIVG01010448001 Vitis vinifera HOM05D004390 ORTHO05D004950 9.9e-27 123.2 85 67.1
arahy.Tifrunner.gnm1.ann1.CM82MG Arachis hypogaea HOM05D004390 ORTHO05D004950 1.3e-26 122.9 89 66.3
Glyma.18G007600 Glycine max HOM05D004390 ORTHO05D004950 1.7e-26 122.5 94 63.8
QL12p006243 Quercus lobata HOM05D004390 ORTHO05D004950 1.7e-26 122.5 89 66.3
Cc11_g00910 Coffea canephora HOM05D004390 ORTHO05D004950 2.2e-26 122.1 93 64.5
Duzib268G0993 Durio zibethinus HOM05D004390 ORTHO05D004950 2.2e-26 122.1 92 64.1
MBI11_g07456_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 2.2e-26 122.1 85 67.1
AUR62024125 Chenopodium quinoa HOM05D004390 ORTHO05D004950 3.7e-26 121.3 79 69.6
Migut.K00715 Erythranthe guttata HOM05D004390 ORTHO05D004950 3.7e-26 121.3 94 62.8
Nitab4.5_0000592g0450 Nicotiana tabacum HOM05D004390 ORTHO05D004950 3.7e-26 121.3 93 65.6
Glyma.08G103600 Glycine max HOM05D004390 ORTHO05D004950 4.9e-26 120.9 94 63.8
Phvul.002G174400 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 4.9e-26 120.9 94 63.8
CAN.G638.34 Capsicum annuum HOM05D004390 ORTHO05D004950 6.4e-26 120.6 93 64.5
Duzib251G0716 Durio zibethinus HOM05D004390 ORTHO05D004950 6.4e-26 120.6 92 64.1
Ca_16468_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 8.3e-26 120.2 93 63.4
Glyma.05G146700 Glycine max HOM05D004390 ORTHO05D004950 8.3e-26 120.2 94 63.8
Sc11g0000500 Simmondsia chinensis HOM05D004390 ORTHO05D004950 8.3e-26 120.2 91 60.4
Ah.02g130970 Amaranthus hybridus HOM05D004390 ORTHO05D004950 1.1e-25 119.8 93 61.3
Lsat_1_v5_gn_3_29821 Lactuca sativa HOM05D004390 ORTHO05D004950 1.1e-25 119.8 92 63.0
TAR622G0138 Trochodendron aralioides HOM05D004390 ORTHO05D004950 1.1e-25 119.8 85 63.5
PSO478G0183 Papaver somniferum HOM05D004390 ORTHO05D004950 1.9e-25 119.0 90 65.6
TPR.G28271 Trifolium pratense HOM05D004390 ORTHO05D004950 2.4e-25 118.6 94 63.8
Zm00001eb052740 Zea mays HOM05D004390 ORTHO05D004950 2.4e-25 118.6 94 61.7
Carub.0003s1416 Capsella rubella HOM05D004390 ORTHO05D004950 3.2e-25 118.2 91 60.4
PSO017G1102 Papaver somniferum HOM05D004390 ORTHO05D004950 4.1e-25 117.9 90 64.4
Sopen03g001750 Solanum pennellii HOM05D004390 ORTHO05D004950 5.4e-25 117.5 93 63.4
TAR629G1658 Trochodendron aralioides HOM05D004390 ORTHO05D004950 7.1e-25 117.1 85 62.4
Oeu058917.1 Olea europaea HOM05D004390 ORTHO05D004950 9.2e-25 116.7 93 61.3
Rhsim12G0027700 Rhododendron simsii HOM05D004390 ORTHO05D004950 1.2e-24 116.3 85 62.4
Zm00001eb218300 Zea mays HOM05D004390 ORTHO05D004950 1.6e-24 115.9 82 63.4
DCAR_031195 Daucus carota HOM05D001171 ORTHO05D006126 7.8e-24 113.6 93 58.1
MBI13_g26147_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 1.7e-23 112.5 90 61.1
HPP92_024163 Vanilla planifolia HOM05D000064 ORTHO05D000281 1.7e-23 112.5 77 64.9
HPP92_024177 Vanilla planifolia HOM05D004390 ORTHO05D004950 1.7e-23 112.5 77 64.9
Ah.03g136230 Amaranthus hybridus HOM05D001171 ORTHO05D006126 1.9e-22 109.0 89 57.3
ClCG09G006830 Citrullus lanatus HOM05D004390 ORTHO05D004950 1.9e-22 109.0 94 58.5
PSO063G2970 Papaver somniferum HOM05D004390 ORTHO05D004950 2.5e-22 108.6 89 55.1
PSO782G4737 Papaver somniferum HOM05D004390 ORTHO05D004950 3.3e-22 108.2 89 53.9
MBI05_g44034_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 4.3e-22 107.8 85 60.0
ATR0561G166 Amborella trichopoda HOM05D004390 ORTHO05D004950 1.6e-21 105.9 91 56.0
SEGI_16803 Sequoiadendron giganteum HOM05D004390 ORTHO05D004950 2.8e-21 105.1 93 57.0
RcHm_v2.0_Chr4g0430591 Rosa chinensis HOM05D004390 ORTHO05D004950 4.7e-21 104.4 81 63.0
Lalb_Chr12g0206281 Lupinus albus HOM05D004390 ORTHO05D004950 1.8e-20 102.4 82 62.2
Lalb_Chr07g0187411 Lupinus albus HOM05D004390 ORTHO05D004950 2.4e-20 102.1 82 59.8
MD13G1117200 Malus domestica HOM05D004390 ORTHO05D004950 2.4e-20 102.1 84 61.9
ATR1098G064 Amborella trichopoda HOM05D004390 ORTHO05D004950 8.9e-20 100.1 91 57.1
CiPaw.05G111600 Carya illinoinensis HOM05D004390 ORTHO05D004950 9.9e-19 96.7 78 59.0
MBI07_g16243_MAGBIO Magnolia biondii HOM05D002351 ORTHO05D004950 9.9e-19 96.7 74 60.8
Pp3c4_12150 Physcomitrium patens HOM05D004390 ORTHO05D004950 1.7e-18 95.9 89 51.7
SMO364G0480 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 2.2e-18 95.5 78 55.1
Solyc03g005740.3 Solanum lycopersicum HOM05D004390 ORTHO05D004950 6.4e-18 94.0 81 59.3
Pp3c10_14440 Physcomitrium patens HOM05D004390 ORTHO05D004950 1.1e-17 93.2 89 49.4
Sp3g12740 Schrenkiella parvula HOM05D004390 ORTHO05D004950 7.1e-17 90.5 61 67.2
TPR.G10940 Trifolium pratense HOM05D004390 ORTHO05D004950 2.1e-16 89.0 65 61.5
Mapoly0041s0086 Marchantia polymorpha HOM05D004390 ORTHO05D004950 2.3e-15 85.5 90 48.9
CBR_g48133 Chara braunii HOM05D004390 ORTHO05D004950 1.9e-14 82.4 73 50.7
Manes.13G018500 Manihot esculenta HOM05D004390 ORTHO05D004950 1.9e-14 82.4 72 56.9
MCO16G111 Micromonas commoda HOM05D004390 ORTHO05D004950 9.6e-14 80.1 87 42.5
SMO145G0172 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 6.2e-13 77.4 73 41.1
MBI07_g34630_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 8.1e-13 77.0 66 51.5
PRCOL_00005433 Prasinoderma coloniale HOM05D004390 ORTHO05D004950 4.4e-11 71.2 71 42.3
Nn1g04852 Nelumbo nucifera HOM05D004390 ORTHO05D004950 3.2e-09 65.1 52 63.5
Nn4g24822 Nelumbo nucifera HOM05D002155 ORTHO05D004950 3.2e-09 65.1 52 63.5
Lalb_Chr22g0358881 Lupinus albus HOM05D004390 ORTHO05D004950 1.2e-08 63.2 38 65.8
Pp3c3_460 Physcomitrium patens HOM05D004390 ORTHO05D004950 2.1e-08 62.4 73 37.0
SEGI_01546 Sequoiadendron giganteum HOM05D007557 ORTHO05D009573 7.8e-08 60.5 81 37.0
SMO197G0059 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 5.1e-07 57.8 69 36.2


User provided reference genes

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