Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p55890 Brassica napus HOM05D005598 ORTHO05D040595 8.8e-53 209.9 99 100.0
BraA09t40992Z Brassica rapa HOM05D005598 ORTHO05D040595 4.5e-41 171.0 100 86.0
Sp4g04110 Schrenkiella parvula HOM05D005598 ORTHO05D006587 3.2e-10 68.6 55 61.8
A04p19500 Brassica napus HOM05D005598 ORTHO05D006587 5.4e-10 67.8 77 45.5
BcaB06g28035 Brassica carinata HOM05D005598 ORTHO05D006587 7.1e-10 67.4 77 45.5
BcaC02g08374 Brassica carinata HOM05D005598 ORTHO05D006587 7.1e-10 67.4 77 45.5
C04p55060 Brassica napus HOM05D005598 ORTHO05D006587 7.1e-10 67.4 77 45.5
BolC4t27046H Brassica oleracea HOM05D005598 ORTHO05D006587 7.1e-10 67.4 77 45.5
BraA04t17544Z Brassica rapa HOM05D005598 ORTHO05D006587 7.1e-10 67.4 77 45.5
Aa31LG7G12150 Aethionema arabicum HOM05D005598 ORTHO05D006587 1.2e-09 66.6 55 61.8
AL4G16260 Arabidopsis lyrata HOM05D005598 ORTHO05D006587 1.2e-09 66.6 55 60.0
AT2G25100 Arabidopsis thaliana HOM05D005598 ORTHO05D006587 1.2e-09 66.6 55 60.0
CARHR116600 Cardamine hirsuta HOM05D005598 ORTHO05D006587 2.1e-09 65.9 55 60.0
Thhalv10000575m.g Eutrema salsugineum HOM05D005598 ORTHO05D006587 2.1e-09 65.9 77 45.5
Carub.0004s0468 Capsella rubella HOM05D005598 ORTHO05D006587 3.5e-09 65.1 55 60.0
Lj5g0018811 Lotus japonicus HOM05D005598 ORTHO05D006587 1.3e-08 63.2 75 42.7
PSO339G6152 Papaver somniferum HOM05D005598 ORTHO05D006587 1.7e-08 62.8 75 44.0
Ciclev10016103m.g Citrus clementina HOM05D005598 ORTHO05D006587 3.9e-08 61.6 53 54.7
Nn6g34854 Nelumbo nucifera HOM05D005598 ORTHO05D006587 8.6e-08 60.5 75 40.0
PSO801G0206 Papaver somniferum HOM05D005598 ORTHO05D006587 8.6e-08 60.5 75 42.7
PGR142G4231 Punica granatum HOM05D005598 ORTHO05D006587 8.6e-08 60.5 75 41.3
Lalb_Chr02g0146251 Lupinus albus HOM05D005598 ORTHO05D006587 1.1e-07 60.1 75 38.7
CANSAT56G2222 Cannabis sativa HOM05D005598 ORTHO05D006587 2.5e-07 58.9 71 43.7
Cpa.g.c34135 Carica papaya HOM05D005598 ORTHO05D006587 2.5e-07 58.9 75 40.0
THA.LOC104824207 Tarenaya hassleriana HOM05D005598 ORTHO05D006587 2.5e-07 58.9 72 41.7
Dinv11826 Davidia involucrata HOM05D005598 ORTHO05D006587 3.3e-07 58.5 75 40.0
QL04p046731 Quercus lobata HOM05D005598 ORTHO05D006587 4.3e-07 58.2 75 40.0
TPR.G2473 Trifolium pratense HOM05D005598 ORTHO05D006587 4.3e-07 58.2 76 36.8
CiPaw.13G040600 Carya illinoinensis HOM05D005598 ORTHO05D006587 5.6e-07 57.8 71 39.4
TWI38G0756 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 5.6e-07 57.8 51 54.9
ClCG07G015650 Citrullus lanatus HOM05D005598 ORTHO05D006587 7.3e-07 57.4 52 53.8
MELO3C017716.2 Cucumis melo HOM05D005598 ORTHO05D006587 7.3e-07 57.4 52 53.8
CsaV3_4G003460 Cucumis sativus L. HOM05D005598 ORTHO05D006587 7.3e-07 57.4 52 53.8
CSS0000091 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 9.5e-07 57.0 53 50.9
Haze_03295 Corylus avellana HOM05D005598 ORTHO05D006587 9.5e-07 57.0 53 50.9
HanXRQChr05g0158341 Helianthus annuus HOM05D005598 ORTHO05D006587 9.5e-07 57.0 52 53.8
HanXRQChr11g0342091 Helianthus annuus HOM05D005598 ORTHO05D006587 9.5e-07 57.0 52 53.8
MD02G1261600 Malus domestica HOM05D005598 ORTHO05D006587 9.5e-07 57.0 75 38.7
Ca_25662_v3 Cicer arietinum L. HOM05D005598 ORTHO05D006587 1.2e-06 56.6 75 36.0
Gohir.A05G287700 Gossypium hirsutum HOM05D005598 ORTHO05D006587 1.2e-06 56.6 75 36.0
Gohir.D05G288900 Gossypium hirsutum HOM05D005598 ORTHO05D006587 1.2e-06 56.6 75 36.0
Peaxi162Scf00173g00110 Petunia axillaris HOM05D005598 ORTHO05D006587 1.2e-06 56.6 52 53.8
Potri.008G019800 Populus trichocarpa HOM05D005598 ORTHO05D006587 1.2e-06 56.6 50 54.0
Duzib128G1802 Durio zibethinus HOM05D005598 ORTHO05D006587 1.6e-06 56.2 75 37.3
Glyma.10G278500 Glycine max HOM05D005598 ORTHO05D006587 1.6e-06 56.2 75 36.0
Rhsim09G0141700 Rhododendron simsii HOM05D005598 ORTHO05D006587 1.6e-06 56.2 75 40.0
Cc02_g09610 Coffea canephora HOM05D005598 ORTHO05D006587 2.1e-06 55.8 50 52.0
Psat0s4121g0080 Pisum sativum HOM05D005598 ORTHO05D006587 2.1e-06 55.8 75 37.3
Psat4g059000 Pisum sativum HOM05D005598 ORTHO05D006587 2.1e-06 55.8 75 37.3
Sed0022725 Sechium edule HOM05D005598 ORTHO05D006587 2.1e-06 55.8 52 51.9
Actinidia34728 Actinidia chinensis HOM05D005598 ORTHO05D006587 2.8e-06 55.5 75 38.7
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 2.8e-06 55.5 49 55.1
Dinv10930 Davidia involucrata HOM05D005598 ORTHO05D006587 2.8e-06 55.5 53 49.1
TWI63G1098 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 2.8e-06 55.5 51 52.9
Thecc.10G109100 Theobroma cacao HOM05D005598 ORTHO05D006587 3.6e-06 55.1 75 36.0
TAR636G1340 Trochodendron aralioides HOM05D005598 ORTHO05D006587 3.6e-06 55.1 50 54.0
vmacro10312 Vaccinium macrocarpon HOM05D005598 ORTHO05D006587 3.6e-06 55.1 53 50.9
AUR62041514 Chenopodium quinoa HOM05D005598 ORTHO05D006587 4.7e-06 54.7 51 49.0
AUR62042081 Chenopodium quinoa HOM05D005598 ORTHO05D006587 4.7e-06 54.7 51 49.0
Phvul.007G022800 Phaseolus vulgaris HOM05D005598 ORTHO05D006587 4.7e-06 54.7 75 36.0
Sabra08G0013100 Salix brachista HOM05D005598 ORTHO05D006587 4.7e-06 54.7 49 53.1
CSS0039611 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 6.2e-06 54.3 59 45.8
ECA238G1649 Erigeron canadensis HOM05D005598 ORTHO05D006587 6.2e-06 54.3 76 38.2
Migut.F01603 Erythranthe guttata HOM05D005598 ORTHO05D006587 6.2e-06 54.3 71 36.6
Gorai.009G304000 Gossypium raimondii HOM05D005598 ORTHO05D006587 6.2e-06 54.3 75 36.0
Medtr1g111980 Medicago truncatula HOM05D005598 ORTHO05D006587 6.2e-06 54.3 76 34.2
RcHm_v2.0_Chr5g0049931 Rosa chinensis HOM05D005598 ORTHO05D006587 6.2e-06 54.3 75 34.7
Aqoxy4G02744 Aquilegia oxysepala HOM05D005598 ORTHO05D006587 8.1e-06 53.9 75 37.3
Eucgr.G02689 Eucalyptus grandis HOM05D005598 ORTHO05D006587 8.1e-06 53.9 49 53.1
Lj2C33T4 Lonicera japonica HOM05D005598 ORTHO05D006587 8.1e-06 53.9 53 49.1


User provided reference genes

Program Settings