Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p51360 Brassica napus HOM05D006973 ORTHO05D008636 7.7e-56 220.3 117 100.0
BraA09t40577Z Brassica rapa HOM05D006973 ORTHO05D008636 1.7e-55 219.2 117 99.1
BcaC07g40229 Brassica carinata HOM05D006973 ORTHO05D008636 2.7e-48 195.3 118 89.8
BcaC07g40299 Brassica carinata HOM05D006973 ORTHO05D008636 4.7e-45 184.5 108 94.4
C08p34140 Brassica napus HOM05D006973 ORTHO05D008636 4.7e-45 184.5 108 94.4
BolC8t51013H Brassica oleracea HOM05D006973 ORTHO05D008636 4.7e-45 184.5 108 94.4
A04p02340 Brassica napus HOM05D006973 ORTHO05D008636 4.8e-42 174.5 117 80.3
BcaC02g10032 Brassica carinata HOM05D006973 ORTHO05D008636 6.3e-42 174.1 117 80.3
C04p33710 Brassica napus HOM05D006973 ORTHO05D008636 6.3e-42 174.1 117 80.3
BolC4t24939H Brassica oleracea HOM05D006973 ORTHO05D008636 6.3e-42 174.1 117 80.3
BcaB02g08235 Brassica carinata HOM05D006973 ORTHO05D008636 8.3e-42 173.7 117 79.5
BraA04t15963Z Brassica rapa HOM05D006973 ORTHO05D008636 1.8e-41 172.6 117 79.5
Sp5g04010 Schrenkiella parvula HOM05D006973 ORTHO05D008636 1.8e-41 172.6 119 83.2
CARHR169260 Cardamine hirsuta HOM05D006973 ORTHO05D008636 3.0e-36 155.2 119 75.6
Thhalv10006323m.g Eutrema salsugineum HOM05D006973 ORTHO05D008636 6.8e-36 154.1 119 76.5
AL5G40650 Arabidopsis lyrata HOM05D006973 ORTHO05D008636 5.4e-33 144.4 119 72.3
Carub.0005s2563 Capsella rubella HOM05D006973 ORTHO05D008636 1.2e-32 143.3 121 69.4
AT3G58850 Arabidopsis thaliana HOM05D006973 ORTHO05D008636 8.6e-31 137.1 120 70.0
BcaB06g29268 Brassica carinata HOM05D006973 ORTHO05D008636 6.1e-29 131.0 118 65.3
BcaB06g29270 Brassica carinata HOM05D006973 ORTHO05D008636 6.1e-29 131.0 118 65.3
BcaC02g07217 Brassica carinata HOM05D006973 ORTHO05D008636 8.9e-28 127.1 118 63.6
C04p69950 Brassica napus HOM05D006973 ORTHO05D008636 8.9e-28 127.1 118 63.6
BolC4t28495H Brassica oleracea HOM05D006973 ORTHO05D008636 8.9e-28 127.1 118 63.6
A04p32440 Brassica napus HOM05D006973 ORTHO05D008636 1.5e-27 126.3 118 62.7
BraA04t18696Z Brassica rapa HOM05D006973 ORTHO05D008636 1.5e-27 126.3 118 62.7
A03p23820 Brassica napus HOM05D006973 ORTHO05D008636 2.6e-27 125.6 118 62.7
BraA03t11597Z Brassica rapa HOM05D006973 ORTHO05D008636 2.6e-27 125.6 118 62.7
BraA05t19306Z Brassica rapa HOM05D006973 ORTHO05D008636 2.6e-27 125.6 118 63.6
A05p03160 Brassica napus HOM05D006973 ORTHO05D008636 2.2e-26 122.5 118 62.7
BcaC02g12446 Brassica carinata HOM05D006973 ORTHO05D008636 3.7e-26 121.7 118 61.9
BolC4t22017H Brassica oleracea HOM05D006973 ORTHO05D008636 3.7e-26 121.7 118 61.9
C04p03810 Brassica napus HOM05D006973 ORTHO05D008636 4.9e-26 121.3 118 61.9
Carub.0004s2531 Capsella rubella HOM05D006973 ORTHO05D008636 7.0e-25 117.5 120 60.0
CARHR137940 Cardamine hirsuta HOM05D006973 ORTHO05D008636 7.0e-25 117.5 119 58.0
AL4G41480 Arabidopsis lyrata HOM05D006973 ORTHO05D008636 3.5e-24 115.2 119 58.8
AL713U10010 Arabidopsis lyrata HOM05D006973 ORTHO05D008636 3.5e-24 115.2 119 58.8
AT2G42870 Arabidopsis thaliana HOM05D006973 ORTHO05D008636 8.6e-23 110.5 120 60.0
Sp4g25000 Schrenkiella parvula HOM05D006973 ORTHO05D008636 2.5e-22 109.0 118 56.8
C03p28410 Brassica napus HOM05D006973 ORTHO05D008636 9.5e-22 107.1 119 57.1
BolC3t15210H Brassica oleracea HOM05D006973 ORTHO05D008636 9.5e-22 107.1 119 57.1
Aa31LG1G24640 Aethionema arabicum HOM05D006973 ORTHO05D008636 2.8e-21 105.5 124 54.0
Aa31LG10G13410 Aethionema arabicum HOM05D006973 ORTHO05D008636 3.1e-20 102.1 123 56.1
Thhalv10017430m.g Eutrema salsugineum HOM05D006973 ORTHO05D008636 3.1e-20 102.1 124 55.6
BcaB01g03419 Brassica carinata HOM05D006973 ORTHO05D008636 3.4e-19 98.6 120 54.2
Manes.02G084300 Manihot esculenta HOM05D006973 ORTHO05D008636 4.3e-14 81.6 93 53.8
Glyma.02G286900 Glycine max HOM05D006973 ORTHO05D008636 1.2e-13 80.1 89 51.7
Nitab4.5_0001675g0100 Nicotiana tabacum HOM05D006973 ORTHO05D008636 1.6e-13 79.7 78 57.7
Nn3g20922 Nelumbo nucifera HOM05D006973 ORTHO05D008636 1.1e-12 77.0 68 57.4
Potri.005G201500 Populus trichocarpa HOM05D006973 ORTHO05D008636 1.8e-12 76.3 93 50.5
Nitab4.5_0003934g0010 Nicotiana tabacum HOM05D006973 ORTHO05D008636 2.3e-12 75.9 62 66.1
Prupe.3G172700 Prunus persica HOM05D006973 ORTHO05D008636 2.3e-12 75.9 97 50.5
Sabra02G0048600 Salix brachista HOM05D006973 ORTHO05D008636 2.3e-12 75.9 95 50.5
VMungo0647G1950 Vigna mungo HOM05D006973 ORTHO05D008636 2.3e-12 75.9 67 58.2
Ciclev10033026m.g Citrus clementina HOM05D006973 ORTHO05D008636 3.1e-12 75.5 65 66.2
Nn6g34359 Nelumbo nucifera HOM05D006973 ORTHO05D008636 4.0e-12 75.1 68 52.9
PGSC0003DMG400017344 Solanum tuberosum HOM05D006973 ORTHO05D008636 6.8e-12 74.3 62 66.1
Phvul.008G191400 Phaseolus vulgaris HOM05D006973 ORTHO05D008636 8.9e-12 73.9 66 57.6
CAN.G585.39 Capsicum annuum HOM05D006973 ORTHO05D008636 1.2e-11 73.6 62 64.5
Solyc07g056360.1 Solanum lycopersicum HOM05D006973 ORTHO05D008636 1.2e-11 73.6 62 66.1
Sopen07g029740 Solanum pennellii HOM05D006973 ORTHO05D008636 1.2e-11 73.6 62 66.1
Potri.002G060100 Populus trichocarpa HOM05D006973 ORTHO05D008636 1.5e-11 73.2 92 47.8
Duzib147G0021 Durio zibethinus HOM05D006973 ORTHO05D008636 2.0e-11 72.8 62 62.9
Glyma.14G028000 Glycine max HOM05D006973 ORTHO05D008636 2.6e-11 72.4 64 57.8
QL08p044096 Quercus lobata HOM05D006973 ORTHO05D008636 2.6e-11 72.4 68 55.9
Aqoxy4G00147 Aquilegia oxysepala HOM05D006973 ORTHO05D008636 3.4e-11 72.0 73 53.4
FAN05G1052 Fragaria x ananassa HOM05D006973 ORTHO05D008636 4.4e-11 71.6 123 42.3
Medtr5g091690 Medicago truncatula HOM05D006973 ORTHO05D008636 4.4e-11 71.6 67 56.7
Thecc.01G161800 Theobroma cacao HOM05D006973 ORTHO05D008636 4.4e-11 71.6 62 61.3
CANSAT64G0305 Cannabis sativa HOM05D006973 ORTHO05D008636 5.8e-11 71.2 61 57.4
Cfa021245 Carpinus fangiana HOM05D006973 ORTHO05D008636 5.8e-11 71.2 69 52.2
Duzib187G1733 Durio zibethinus HOM05D006973 ORTHO05D008636 5.8e-11 71.2 107 48.6
TAR629G2498 Trochodendron aralioides HOM05D006973 ORTHO05D008636 5.8e-11 71.2 83 45.8
RcHm_v2.0_Chr2g0151491 Rosa chinensis HOM05D006973 ORTHO05D008636 1.3e-10 70.1 99 46.5
THA.LOC104803237 Tarenaya hassleriana HOM05D006973 ORTHO05D008636 1.3e-10 70.1 59 57.6
Haze_13497 Corylus avellana HOM05D006973 ORTHO05D008636 1.7e-10 69.7 59 54.2
FvH4_6g38230 Fragaria vesca HOM05D006973 ORTHO05D008636 1.7e-10 69.7 123 43.9
FAN14G5571 Fragaria x ananassa HOM05D006973 ORTHO05D008636 1.7e-10 69.7 123 43.9
ClCG09G022400 Citrullus lanatus HOM05D006973 ORTHO05D008636 2.2e-10 69.3 97 45.4
FAN02G1229 Fragaria x ananassa HOM05D006973 ORTHO05D008636 2.2e-10 69.3 123 43.9
Lalb_Chr17g0348291 Lupinus albus HOM05D006973 ORTHO05D008636 2.2e-10 69.3 69 52.2
Atru.chr6.2093 Acer truncatum HOM05D006973 ORTHO05D008636 2.9e-10 68.9 62 59.7
Dinv21566 Davidia involucrata HOM05D006973 ORTHO05D008636 2.9e-10 68.9 88 47.7
Gohir.A11G060500 Gossypium hirsutum HOM05D006973 ORTHO05D008636 3.7e-10 68.6 62 61.3
Peaxi162Scf00111g00009 Petunia axillaris HOM05D006973 ORTHO05D008636 3.7e-10 68.6 115 41.7
Gohir.D11G064600 Gossypium hirsutum HOM05D006973 ORTHO05D008636 4.9e-10 68.2 62 61.3
Gorai.007G069800 Gossypium raimondii HOM05D006973 ORTHO05D008636 4.9e-10 68.2 62 61.3
TPR.G12665 Trifolium pratense HOM05D006973 ORTHO05D008636 4.9e-10 68.2 64 54.7
Rhsim06G0116300 Rhododendron simsii HOM05D006973 ORTHO05D008636 6.4e-10 67.8 76 47.4
FAN09G4519 Fragaria x ananassa HOM05D006973 ORTHO05D008636 1.1e-09 67.0 118 41.5
Oeu040038.1 Olea europaea HOM05D006973 ORTHO05D008636 1.1e-09 67.0 70 55.7
PGR042G1786 Punica granatum HOM05D006973 ORTHO05D008636 1.4e-09 66.6 53 60.4
MELO3C014471.2 Cucumis melo HOM05D006973 ORTHO05D008636 2.4e-09 65.9 60 53.3
CsaV3_6G038070 Cucumis sativus L. HOM05D006973 ORTHO05D008636 4.1e-09 65.1 88 43.2
Lalb_Chr04g0248771 Lupinus albus HOM05D006973 ORTHO05D008636 5.4e-09 64.7 62 53.2
MBI07_g21782_MAGBIO Magnolia biondii HOM05D006973 ORTHO05D008636 3.5e-08 62.0 58 55.2
MBI07_g41313_MAGBIO Magnolia biondii HOM05D006973 ORTHO05D008636 3.5e-08 62.0 58 55.2
Actinidia32515 Actinidia chinensis HOM05D006973 ORTHO05D008636 4.6e-08 61.6 95 44.2
DCAR_013315 Daucus carota HOM05D006973 ORTHO05D008636 6.0e-08 61.2 107 43.9
Lalb_Chr10g0106711 Lupinus albus HOM05D006973 ORTHO05D008636 6.0e-08 61.2 62 46.8
Oeu020059.1 Olea europaea HOM05D006973 ORTHO05D008636 1.0e-07 60.5 90 44.4
arahy.Tifrunner.gnm1.ann1.D7Q1BT Arachis hypogaea HOM05D006973 ORTHO05D008636 1.3e-07 60.1 55 52.7
arahy.Tifrunner.gnm1.ann1.SG1KTY Arachis hypogaea HOM05D006973 ORTHO05D008636 1.3e-07 60.1 55 52.7
Cc05_g09430 Coffea canephora HOM05D006973 ORTHO05D008636 1.3e-07 60.1 95 44.2
Sed0009997 Sechium edule HOM05D006973 ORTHO05D008636 1.3e-07 60.1 91 38.5
LjContig00310g0018130 Lotus japonicus HOM05D006973 ORTHO05D008636 3.0e-07 58.9 128 38.3
CSS0041461 Camellia sinensis var. sinensis HOM05D006973 ORTHO05D008636 6.6e-07 57.8 63 52.4
MSTRG.14293 Avicennia marina HOM05D006973 ORTHO05D008636 1.1e-06 57.0 101 42.6
MBI10_g03529_MAGBIO Magnolia biondii HOM05D006973 ORTHO05D008636 1.1e-06 57.0 55 47.3
arahy.Tifrunner.gnm1.ann1.9T2B0R Arachis hypogaea HOM05D006973 ORTHO05D008636 1.5e-06 56.6 50 56.0
Zm00001eb159180 Zea mays HOM05D006973 ORTHO05D008636 4.3e-06 55.1 63 42.9


User provided reference genes

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