Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 1.9e-203 712.2 353 100.0
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 6.9e-201 703.7 353 99.2
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 4.3e-195 684.5 356 95.8
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 5.7e-195 684.1 356 95.8
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 6.3e-194 680.6 356 95.2
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 2.6e-192 675.2 356 95.5
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 3.7e-178 628.2 351 89.5
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 1.4e-177 626.3 351 89.5
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 4.1e-177 624.8 351 88.9
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 9.1e-177 623.6 362 88.7
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 2.9e-175 618.6 361 89.8
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 5.0e-175 617.8 353 88.1
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 1.2e-173 613.2 345 88.7
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 1.1e-158 563.5 359 82.5
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 2.8e-157 558.9 362 78.5
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 7.8e-152 540.8 392 72.4
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 3.9e-143 511.9 332 75.3
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 1.5e-142 510.0 337 74.8
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.1e-140 503.8 347 73.5
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 4.0e-140 501.9 354 70.6
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 1.2e-139 500.4 346 69.9
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 3.4e-139 498.8 355 70.4
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 1.1e-137 493.8 341 71.3
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 2.4e-137 492.7 320 74.1
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 3.2e-137 492.3 318 75.2
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 7.1e-137 491.1 318 74.8
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 1.2e-136 490.3 323 74.3
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 2.7e-136 489.2 318 74.5
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 2.7e-136 489.2 320 74.4
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 3.5e-136 488.8 345 71.0
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.0e-135 487.3 337 70.9
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.3e-135 486.9 324 71.6
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 1.7e-135 486.5 341 69.2
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 5.1e-135 485.0 324 72.2
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 8.6e-135 484.2 345 68.4
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 8.6e-135 484.2 324 73.1
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 1.9e-134 483.0 341 69.2
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 2.5e-134 482.6 340 69.4
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 2.5e-134 482.6 383 66.6
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 4.3e-134 481.9 333 71.5
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 7.3e-134 481.1 349 70.2
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 7.3e-134 481.1 348 69.8
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 1.2e-133 480.3 336 70.2
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 1.6e-133 479.9 323 72.1
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 1.6e-133 479.9 328 72.0
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 2.1e-133 479.6 336 70.5
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 2.8e-133 479.2 325 72.6
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 3.6e-133 478.8 346 68.2
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 3.6e-133 478.8 325 71.4
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 6.2e-133 478.0 324 70.7
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 8.1e-133 477.6 329 70.5
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 1.1e-132 477.2 329 71.4
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 1.1e-132 477.2 320 72.2
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 1.1e-132 477.2 320 72.2
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.8e-132 476.5 327 71.6
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 1.8e-132 476.5 324 71.6
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 3.1e-132 475.7 333 70.3
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 4.0e-132 475.3 324 69.8
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 6.8e-132 474.6 344 69.2
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 1.2e-131 473.8 351 67.0
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.5e-131 473.4 320 71.9
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 2.0e-131 473.0 321 73.2
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 2.6e-131 472.6 322 72.0
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 5.8e-131 471.5 355 68.5
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 1.7e-130 469.9 347 67.4
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 2.2e-130 469.5 319 72.1
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 4.9e-130 468.4 339 68.4
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 6.4e-130 468.0 373 65.1
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 1.1e-129 467.2 340 68.2
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.4e-129 466.1 320 70.9
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 4.1e-129 465.3 352 68.2
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 5.4e-129 464.9 330 69.7
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 5.4e-129 464.9 330 68.5
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 5.4e-129 464.9 335 68.4
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 7.1e-129 464.5 335 68.7
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 7.1e-129 464.5 305 73.4
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 7.1e-129 464.5 341 68.0
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 7.1e-129 464.5 348 66.4
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 1.2e-128 463.8 330 70.0
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 2.7e-128 462.6 330 69.7
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 4.6e-128 461.8 329 70.5
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 7.8e-128 461.1 326 68.7
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 7.8e-128 461.1 330 67.3
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 1.0e-127 460.7 333 69.4
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 1.3e-127 460.3 341 67.2
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 1.3e-127 460.3 333 68.5
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 1.3e-127 460.3 344 67.4
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 1.7e-127 459.9 325 69.8
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 2.3e-127 459.5 341 67.7
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 3.0e-127 459.1 350 66.3
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 6.6e-127 458.0 341 68.0
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 8.6e-127 457.6 318 71.7
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 1.1e-126 457.2 302 73.8
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 1.1e-126 457.2 321 68.8
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 1.5e-126 456.8 358 64.8
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 1.9e-126 456.4 321 69.5
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 9.6e-126 454.1 342 67.0
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 9.6e-126 454.1 322 69.9
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 2.8e-125 452.6 338 67.2
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 8.1e-125 451.1 334 68.0
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 1.4e-124 450.3 341 65.7
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 1.8e-124 449.9 360 63.1
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 3.1e-124 449.1 327 67.9
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 8.9e-124 447.6 325 68.0
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.6e-123 446.0 306 70.9
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 3.4e-123 445.7 341 64.2
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 4.4e-123 445.3 334 66.2
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 9.9e-123 444.1 330 68.2
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 1.3e-122 443.7 319 69.6
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 3.8e-122 442.2 320 66.9
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 3.2e-121 439.1 333 65.8
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 7.1e-121 438.0 324 68.5
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.1e-120 436.4 314 68.2
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 6.0e-120 434.9 308 68.8
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 7.8e-120 434.5 337 63.8
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 2.3e-119 433.0 380 59.7
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 3.0e-119 432.6 320 67.8
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 1.1e-118 430.6 317 67.8
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 1.9e-118 429.9 339 64.6
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 7.3e-118 427.9 326 66.3
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 6.9e-116 421.4 342 62.6
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 6.9e-116 421.4 328 65.5
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 1.2e-112 410.6 325 63.1
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 7.9e-112 407.9 323 64.1
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 1.3e-111 407.1 552 44.6
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 1.6e-109 400.2 261 74.7
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 3.1e-108 396.0 318 62.3
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 5.5e-105 385.2 267 72.3
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 7.9e-104 381.3 259 71.0
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 2.1e-101 373.2 268 69.4
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 2.6e-99 366.3 325 58.5
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 2.9e-90 336.3 318 55.3
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 5.0e-90 335.5 280 62.1
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 1.1e-89 334.3 220 70.9
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 7.2e-89 331.6 222 73.0
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.2e-88 330.9 207 75.8
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 3.6e-88 329.3 324 52.2
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 2.0e-83 313.5 266 61.3
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 7.7e-83 311.6 210 75.2
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 2.5e-81 306.6 217 68.7
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 1.6e-80 303.9 232 66.4
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 1.4e-79 300.8 287 53.3
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 7.2e-73 278.5 163 82.2
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 1.1e-68 264.6 376 42.0
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 1.3e-61 241.1 183 65.6
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 2.4e-60 236.9 162 70.4
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 1.7e-58 230.7 159 71.7
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 1.9e-57 227.3 213 58.2
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 2.1e-56 223.8 161 72.0
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 3.8e-50 203.0 163 62.0
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 1.8e-47 194.1 325 39.7
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 2.0e-46 190.7 256 43.8
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 6.6e-42 175.6 189 51.9
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 1.1e-41 174.9 120 65.0
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 1.8e-31 141.0 109 68.8
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 2.6e-30 137.1 330 31.5
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 3.9e-26 123.2 67 83.6
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 5.0e-26 122.9 382 30.1
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 6.6e-26 122.5 248 33.5
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 9.5e-25 118.6 97 53.6
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.1e-23 115.2 128 50.8
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 5.6e-17 92.8 56 80.4
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 5.6e-17 92.8 57 75.4
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 2.4e-15 87.4 84 50.0
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 1.5e-14 84.7 57 73.7
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 9.2e-12 75.5 60 63.3
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 7.8e-11 72.4 54 59.3
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 5.6e-09 66.2 74 45.9


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