Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p28870 Brassica napus HOM05D005673 ORTHO05D007081 5.8e-141 504.2 256 100.0
BcaC04g21010 Brassica carinata HOM05D005673 ORTHO05D007081 6.9e-134 480.7 259 95.4
C09p36690 Brassica napus HOM05D005673 ORTHO05D007081 6.9e-134 480.7 259 95.4
BolC9t56500H Brassica oleracea HOM05D005673 ORTHO05D007081 6.9e-134 480.7 259 95.4
BcaB01g01447 Brassica carinata HOM05D005673 ORTHO05D007081 5.9e-125 451.1 263 88.2
Sp6g07430 Schrenkiella parvula HOM05D005673 ORTHO05D007081 4.1e-118 428.3 262 84.0
CARHR261110 Cardamine hirsuta HOM05D005673 ORTHO05D007081 5.3e-118 427.9 262 85.1
Thhalv10028887m.g Eutrema salsugineum HOM05D005673 ORTHO05D007081 1.2e-117 426.8 261 85.8
AL6G43874 Arabidopsis lyrata HOM05D005673 ORTHO05D007081 1.5e-117 426.4 262 83.2
AT4G10090 Arabidopsis thaliana HOM05D005673 ORTHO05D007081 2.9e-116 422.2 262 82.8
Carub.0006s2866 Capsella rubella HOM05D005673 ORTHO05D007081 1.9e-115 419.5 263 82.5
Aa31LG9G11910 Aethionema arabicum HOM05D005673 ORTHO05D007081 1.2e-109 400.2 256 79.7
THA.LOC104825722 Tarenaya hassleriana HOM05D005673 ORTHO05D007081 2.8e-103 379.0 263 74.5
Manes.07G105200 Manihot esculenta HOM05D005673 ORTHO05D007081 1.3e-84 317.0 259 61.8
Ciclev10032487m.g Citrus clementina HOM05D005673 ORTHO05D007081 1.6e-82 310.1 256 62.1
Thecc.10G064600 Theobroma cacao HOM05D005673 ORTHO05D007081 1.0e-81 307.4 258 61.2
Potri.008G046400 Populus trichocarpa HOM05D005673 ORTHO05D007081 3.4e-80 302.4 260 59.6
Sabra08G0032600 Salix brachista HOM05D005673 ORTHO05D007081 2.2e-79 299.7 260 59.6
COL.COLO4_08204 Corchorus olitorius HOM05D005673 ORTHO05D007081 3.7e-79 298.9 258 60.1
Duzib114G0197 Durio zibethinus HOM05D005673 ORTHO05D007081 8.3e-79 297.7 258 60.5
Gorai.010G203600 Gossypium raimondii HOM05D005673 ORTHO05D007081 2.4e-78 296.2 260 59.2
Gohir.D06G174000 Gossypium hirsutum HOM05D005673 ORTHO05D007081 3.2e-78 295.8 260 59.2
TWI38G1168 Tripterygium wilfordii HOM05D005673 ORTHO05D007081 5.4e-78 295.0 255 60.0
Gohir.A06G179004 Gossypium hirsutum HOM05D005673 ORTHO05D007081 7.8e-77 291.2 263 57.8
Haze_16957 Corylus avellana HOM05D005673 ORTHO05D007081 2.3e-76 289.7 254 60.2
Cfa001572 Carpinus fangiana HOM05D005673 ORTHO05D007081 3.0e-76 289.3 254 60.2
QL08p057314 Quercus lobata HOM05D005673 ORTHO05D007081 3.9e-76 288.9 259 59.5
CiPaw.02G177700 Carya illinoinensis HOM05D005673 ORTHO05D007081 1.5e-75 287.0 254 60.2
GSVIVG01032643001 Vitis vinifera HOM05D005673 ORTHO05D007081 1.5e-75 287.0 256 58.2
Actinidia38234 Actinidia chinensis HOM05D005673 ORTHO05D007081 4.7e-74 282.0 259 57.5
Lalb_Chr19g0126251 Lupinus albus HOM05D005673 ORTHO05D007081 3.1e-73 279.3 263 54.8
Actinidia03012 Actinidia chinensis HOM05D005673 ORTHO05D007081 4.0e-73 278.9 259 57.1
PGR142G2170 Punica granatum HOM05D005673 ORTHO05D007081 4.0e-73 278.9 266 57.1
CSS0045417 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 5.2e-73 278.5 259 58.7
Lj1A928T62 Lonicera japonica HOM05D005673 ORTHO05D007081 6.8e-73 278.1 259 55.6
CSS0019421 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 2.0e-72 276.6 259 58.3
Lj1A926T37 Lonicera japonica HOM05D005673 ORTHO05D007081 2.0e-72 276.6 259 55.2
PSO384G5123 Papaver somniferum HOM05D005673 ORTHO05D007081 9.8e-72 274.2 260 56.9
Nitab4.5_0002078g0030 Nicotiana tabacum HOM05D005673 ORTHO05D007081 1.3e-71 273.9 263 55.5
PSO339G1442 Papaver somniferum HOM05D005673 ORTHO05D007081 1.7e-71 273.5 260 56.9
Aqoxy4G03141 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 2.9e-71 272.7 258 53.9
MD01G1114500 Malus domestica HOM05D005673 ORTHO05D007081 3.7e-71 272.3 258 57.0
ECA233G0150 Erigeron canadensis HOM05D005673 ORTHO05D007081 1.1e-70 270.8 256 55.9
Nitab4.5_0000575g0020 Nicotiana tabacum HOM05D005673 ORTHO05D007081 1.1e-70 270.8 263 54.8
HanXRQChr08g0219361 Helianthus annuus HOM05D005673 ORTHO05D007081 1.4e-70 270.4 256 56.2
RcHm_v2.0_Chr1g0364441 Rosa chinensis HOM05D005673 ORTHO05D007081 1.4e-70 270.4 254 56.7
CAN.G551.89 Capsicum annuum HOM05D005673 ORTHO05D007081 2.4e-70 269.6 259 54.4
CsaV3_5G006400 Cucumis sativus L. HOM05D005673 ORTHO05D007081 3.2e-70 269.2 259 54.4
FAN10G0505 Fragaria x ananassa HOM05D005673 ORTHO05D007081 3.2e-70 269.2 254 57.1
FAN03G2886 Fragaria x ananassa HOM05D005673 ORTHO05D007081 5.4e-70 268.5 254 56.7
FAN06G2416 Fragaria x ananassa HOM05D005673 ORTHO05D007081 5.4e-70 268.5 254 56.3
arahy.Tifrunner.gnm1.ann1.R12QR1 Arachis hypogaea HOM05D005673 ORTHO05D007081 9.2e-70 267.7 258 52.7
FvH4_7g20560 Fragaria vesca HOM05D005673 ORTHO05D007081 1.2e-69 267.3 254 56.3
FAN06G0951 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.2e-69 267.3 254 56.3
Cfa005598 Carpinus fangiana HOM05D005673 ORTHO05D007081 1.6e-69 266.9 254 57.5
arahy.Tifrunner.gnm1.ann1.YNZN7C Arachis hypogaea HOM05D005673 ORTHO05D007081 4.6e-69 265.4 258 52.7
FAN01G1496 Fragaria x ananassa HOM05D005673 ORTHO05D007081 6.0e-69 265.0 254 56.3
FAN01G2008 Fragaria x ananassa HOM05D005673 ORTHO05D007081 6.0e-69 265.0 254 56.3
PGSC0003DMG400002916 Solanum tuberosum HOM05D005673 ORTHO05D007081 1.3e-68 263.8 259 53.7
MSTRG.9191 Avicennia marina HOM05D005673 ORTHO05D007081 1.7e-68 263.5 258 53.5
Sopen12g004500 Solanum pennellii HOM05D005673 ORTHO05D007081 1.7e-68 263.5 259 53.3
Solyc12g009500.2 Solanum lycopersicum HOM05D005673 ORTHO05D007081 2.3e-68 263.1 259 53.3
Lj1g0007847 Lotus japonicus HOM05D005673 ORTHO05D007081 3.9e-68 262.3 254 54.3
ClCG02G013770 Citrullus lanatus HOM05D005673 ORTHO05D007081 6.6e-68 261.5 264 53.8
MELO3C011718.2 Cucumis melo HOM05D005673 ORTHO05D007081 1.5e-67 260.4 262 53.4
SalBow4G0159 Salvia bowleyana HOM05D005673 ORTHO05D007081 1.5e-67 260.4 253 54.2
Lsat_1_v5_gn_8_21281 Lactuca sativa HOM05D005673 ORTHO05D007081 3.3e-67 259.2 262 53.4
Glyma.08G340700 Glycine max HOM05D005673 ORTHO05D007081 7.3e-67 258.1 256 53.5
MD07G1182600 Malus domestica HOM05D005673 ORTHO05D007081 9.5e-67 257.7 258 55.0
CANSAT11G2273 Cannabis sativa HOM05D005673 ORTHO05D007081 1.6e-66 256.9 251 53.0
MBI14_g17793_MAGBIO Magnolia biondii HOM05D005673 ORTHO05D007081 1.8e-65 253.4 254 56.3
EL10Ac2g03532 Beta vulgaris HOM05D005673 ORTHO05D007081 6.8e-65 251.5 264 52.7
Sed0006326 Sechium edule HOM05D005673 ORTHO05D007081 8.9e-65 251.1 263 51.7
Ca_07421_v3 Cicer arietinum L. HOM05D005673 ORTHO05D007081 2.6e-64 249.6 253 51.8
TPR.G10191 Trifolium pratense HOM05D005673 ORTHO05D007081 2.6e-64 249.6 253 50.6
TAR623G0755 Trochodendron aralioides HOM05D005673 ORTHO05D007081 3.4e-64 249.2 223 60.1
DCAR_015256 Daucus carota HOM05D005673 ORTHO05D007081 1.7e-63 246.9 317 47.0
Eucgr.G02786 Eucalyptus grandis HOM05D005673 ORTHO05D007081 1.7e-63 246.9 259 51.7
Hund22450 Selenicereus undatus HOM05D005673 ORTHO05D007081 1.7e-63 246.9 266 51.9
Ah.16g108000 Amaranthus hybridus HOM05D005673 ORTHO05D007081 4.9e-63 245.4 273 51.6
AUR62036006 Chenopodium quinoa HOM05D005673 ORTHO05D007081 6.4e-63 245.0 266 53.0
Cc09_g02320 Coffea canephora HOM05D005673 ORTHO05D007081 1.4e-62 243.8 255 50.6
Phvul.008G138600 Phaseolus vulgaris HOM05D005673 ORTHO05D007081 1.4e-62 243.8 258 51.9
SGA_v2.0_scaffold62G21443 Striga asiatica HOM05D005673 ORTHO05D007081 1.4e-62 243.8 253 52.6
HPP92_012063 Vanilla planifolia HOM05D005673 ORTHO05D007081 1.5e-59 233.8 267 49.1
Atru.BG.271.p Acer truncatum HOM05D005673 ORTHO05D007081 3.3e-59 232.6 229 55.0
Rhsim03G0121300 Rhododendron simsii HOM05D005673 ORTHO05D007081 5.6e-59 231.9 226 56.6
Prupe.2G221200 Prunus persica HOM05D005673 ORTHO05D007081 2.0e-56 223.4 212 58.0
Oeu008278.1 Olea europaea HOM05D005673 ORTHO05D007081 9.9e-56 221.1 217 54.4
Zm00001eb378810 Zea mays HOM05D005673 ORTHO05D007081 4.9e-55 218.8 234 52.6
Migut.F02013 Erythranthe guttata HOM05D005673 ORTHO05D007081 1.4e-54 217.2 236 49.2
vmacro07099 Vaccinium macrocarpon HOM05D005673 ORTHO05D007081 9.2e-54 214.5 230 55.2
Sc20g0002250 Simmondsia chinensis HOM05D005673 ORTHO05D007081 1.2e-53 214.2 226 52.2
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 6.0e-53 211.8 258 46.9
Os03g0284000 Oryza sativa ssp. japonica HOM05D005673 ORTHO05D007081 2.8e-50 203.0 243 49.0
Nn2g10602 Nelumbo nucifera HOM05D005673 ORTHO05D007081 4.4e-48 195.7 185 55.7
Peaxi162Scf00170g00413 Petunia axillaris HOM05D005673 ORTHO05D007081 7.6e-48 194.9 238 45.8
AUR62041616 Chenopodium quinoa HOM05D005673 ORTHO05D007081 1.9e-46 190.3 266 44.0
Atru.chr12.608 Acer truncatum HOM05D005673 ORTHO05D007081 4.6e-45 185.7 165 58.2
Dinv25934 Davidia involucrata HOM05D005673 ORTHO05D007081 1.8e-41 173.7 168 54.8
Hma1.2p1_0348F.1_g131860 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 6.4e-39 165.2 152 57.2
MD00G1166800 Malus domestica HOM05D005673 ORTHO05D007081 2.1e-37 160.2 183 48.6
SGA_v2.0_scaffold17G08196 Striga asiatica HOM05D005673 ORTHO05D007081 1.6e-34 150.6 168 51.2
Mapoly0003s0199 Marchantia polymorpha HOM05D005673 ORTHO05D007081 1.4e-33 147.5 252 36.1
VMungo1383G1385 Vigna mungo HOM05D005673 ORTHO05D007081 2.4e-33 146.7 152 50.7
Medtr7g047440 Medicago truncatula HOM05D005673 ORTHO05D007081 3.1e-33 146.4 152 49.3
Medtr7g451610 Medicago truncatula HOM05D005673 ORTHO05D007081 3.1e-33 146.4 152 49.3
Medtr7g451710 Medicago truncatula HOM05D005673 ORTHO05D007081 3.1e-33 146.4 152 49.3
Pp3c2_31740 Physcomitrium patens HOM05D005673 ORTHO05D007081 9.0e-33 144.8 266 35.7
HPP92_012075 Vanilla planifolia HOM05D005673 ORTHO05D007081 4.9e-31 139.0 153 49.7
AagrBONN_evm.TU.Sc2ySwM_362.1467 Anthoceros agrestis HOM05D005673 ORTHO05D007081 3.5e-29 132.9 253 31.2
PSO713G0026 Papaver somniferum HOM05D005673 ORTHO05D007081 2.5e-27 126.7 162 47.5
unitig_37.g12298 Utricularia gibba HOM05D005673 ORTHO05D007081 3.3e-27 126.3 124 52.4
SMO347G0616 Selaginella moellendorffii HOM05D005673 ORTHO05D007081 9.6e-27 124.8 202 36.6
Psat3g152960 Pisum sativum HOM05D005673 ORTHO05D007081 2.4e-25 120.2 113 53.1
Psat0s9937g0040 Pisum sativum HOM05D005673 ORTHO05D007081 4.0e-25 119.4 114 55.3
Psat3g152920 Pisum sativum HOM05D005673 ORTHO05D007081 1.0e-23 114.8 94 55.3
Psat3g153040 Pisum sativum HOM05D005673 ORTHO05D007081 4.2e-22 109.4 94 54.3
Aqoxy4G03136 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 3.5e-21 106.3 166 42.2
unitig_37.g12299 Utricularia gibba HOM05D005673 ORTHO05D007081 4.6e-21 105.9 82 54.9
BcaB04g18418 Brassica carinata HOM05D005673 ORTHO05D007081 7.9e-21 105.1 93 62.4
Cpa.g.c44350 Carica papaya HOM05D005673 ORTHO05D007081 1.0e-20 104.8 77 68.8
Hma1.2p1_0348F.1_g131840 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 3.3e-19 99.8 81 65.4
VMungo1383G3547 Vigna mungo HOM05D005673 ORTHO05D007081 5.9e-16 89.0 74 59.5
Medtr7g050450 Medicago truncatula HOM05D005673 ORTHO05D007081 2.7e-13 80.1 78 52.6
CBR_g23354 Chara braunii HOM05D005673 ORTHO05D007081 3.0e-12 76.6 157 35.0
HanXRQChr02g0043631 Helianthus annuus HOM05D005673 ORTHO05D007081 6.7e-12 75.5 95 44.2
Cpa.g.sc5360.1 Carica papaya HOM05D005673 ORTHO05D007081 8.8e-12 75.1 49 73.5
HanXRQChr13g0394111 Helianthus annuus HOM05D005673 ORTHO05D007081 1.5e-08 64.3 76 48.7


User provided reference genes

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