Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p21670 Brassica napus HOM05D001285 ORTHO05D000199 2.5e-86 322.0 155 100.0
BcaC03g17776 Brassica carinata HOM05D001285 ORTHO05D000199 1.1e-65 253.4 129 91.5
BolC2t11860H Brassica oleracea HOM05D001285 ORTHO05D000199 1.1e-65 253.4 129 91.5
BcaC03g14913 Brassica carinata HOM05D001285 ORTHO05D000199 3.5e-64 248.4 129 89.9
A10p10700 Brassica napus HOM05D001285 ORTHO05D000199 3.0e-63 245.4 129 89.9
BraA09t37769Z Brassica rapa HOM05D001285 ORTHO05D000199 5.6e-62 241.1 129 87.6
BolC6t35851H Brassica oleracea HOM05D001285 ORTHO05D000199 1.2e-59 233.4 123 89.4
BcaC08g43423 Brassica carinata HOM05D001285 ORTHO05D000199 1.5e-59 233.0 131 84.7
A06p22000 Brassica napus HOM05D001285 ORTHO05D000199 2.2e-58 229.2 129 81.4
BraA05t21432Z Brassica rapa HOM05D001285 ORTHO05D000199 3.7e-58 228.4 129 84.5
BcaB06g28698 Brassica carinata HOM05D001285 ORTHO05D000199 1.9e-57 226.1 129 80.6
BolC2t10459H Brassica oleracea HOM05D001285 ORTHO05D000199 3.2e-57 225.3 129 82.9
C06p24190 Brassica napus HOM05D001285 ORTHO05D000199 2.1e-56 222.6 129 79.8
BcaB03g15494 Brassica carinata HOM05D001285 ORTHO05D000199 4.6e-56 221.5 129 79.8
BcaB01g00219 Brassica carinata HOM05D001285 ORTHO05D000199 5.1e-55 218.0 119 84.9
A10p12140 Brassica napus HOM05D001285 ORTHO05D000199 6.6e-55 217.6 109 94.5
C02p23920 Brassica napus HOM05D001285 ORTHO05D000199 2.3e-47 192.6 129 74.4
C02p57920 Brassica napus HOM05D001285 ORTHO05D000199 1.9e-46 189.5 129 73.6
BraA08t32912Z Brassica rapa HOM05D001285 ORTHO05D000199 3.5e-40 168.7 129 65.1
C02p49790 Brassica napus HOM05D001285 ORTHO05D000199 1.6e-37 159.8 133 56.4
A02p36790 Brassica napus HOM05D001285 ORTHO05D000199 6.2e-37 157.9 134 55.2
BraA02t08671Z Brassica rapa HOM05D001285 ORTHO05D000199 6.2e-37 157.9 134 55.2
C03p68140 Brassica napus HOM05D001285 ORTHO05D000199 4.0e-36 155.2 131 62.6
BolC3t19035H Brassica oleracea HOM05D001285 ORTHO05D000199 4.0e-36 155.2 131 62.6
C03p03120 Brassica napus HOM05D001285 ORTHO05D000199 6.9e-36 154.5 134 50.7
C06p15920 Brassica napus HOM05D001285 ORTHO05D000199 2.6e-35 152.5 134 50.0
C01p48530 Brassica napus HOM05D001285 ORTHO05D000199 6.4e-34 147.9 131 52.7
BcaB08g35036 Brassica carinata HOM05D001285 ORTHO05D000199 1.4e-33 146.7 129 55.0
C05p38640 Brassica napus HOM05D001285 ORTHO05D000199 5.4e-33 144.8 138 48.6
BcaC05g27865 Brassica carinata HOM05D001285 ORTHO05D000199 1.2e-32 143.7 131 50.4
BraA09t38468Z Brassica rapa HOM05D001285 ORTHO05D000199 1.6e-32 143.3 131 50.4
BcaNung03065 Brassica carinata HOM05D001285 ORTHO05D000199 7.9e-32 141.0 131 49.6
BcaC04g20925 Brassica carinata HOM05D001285 ORTHO05D000199 1.0e-31 140.6 133 51.9
BolC2t07252H Brassica oleracea HOM05D001285 ORTHO05D000199 1.0e-31 140.6 133 52.6
BcaC07g41747 Brassica carinata HOM05D001285 ORTHO05D000199 1.8e-31 139.8 133 51.9
BolC4t23605H Brassica oleracea HOM05D001285 ORTHO05D000199 1.8e-31 139.8 137 43.1
C02p29930 Brassica napus HOM05D001285 ORTHO05D000199 3.9e-31 138.7 142 50.7
BcaC01g02155 Brassica carinata HOM05D001285 ORTHO05D000199 3.3e-30 135.6 115 62.6
BcaC06g30937 Brassica carinata HOM05D001285 ORTHO05D000199 4.3e-30 135.2 133 48.1
BraA01t02157Z Brassica rapa HOM05D001285 ORTHO05D000199 7.4e-30 134.4 122 51.6
BcaB03g15573 Brassica carinata HOM05D001285 ORTHO05D000199 1.3e-29 133.7 133 48.1
BraA03t11415Z Brassica rapa HOM05D001285 ORTHO05D000199 3.7e-29 132.1 122 50.8
BcaC05g27108 Brassica carinata HOM05D001285 ORTHO05D000199 8.1e-29 131.0 127 52.0
BcaC07g38661 Brassica carinata HOM05D001285 ORTHO05D000199 1.4e-28 130.2 102 59.8
C03p68150 Brassica napus HOM05D001285 ORTHO05D000199 2.4e-28 129.4 115 59.1
BolC3t19036H Brassica oleracea HOM05D001285 ORTHO05D000199 2.4e-28 129.4 115 59.1
BraA07t28518Z Brassica rapa HOM05D001285 ORTHO05D000199 9.0e-28 127.5 122 50.0
A02p26990 Brassica napus HOM05D001285 ORTHO05D000199 2.0e-27 126.3 133 47.4
BcaB03g15497 Brassica carinata HOM05D001285 ORTHO05D000199 4.2e-25 118.6 65 81.5
C03p68130 Brassica napus HOM05D001285 ORTHO05D000199 9.3e-25 117.5 110 58.2
BcaC08g43217 Brassica carinata HOM05D001285 ORTHO05D000199 6.0e-24 114.8 119 48.7
BcaB03g16504 Brassica carinata HOM05D001285 ORTHO05D000199 7.9e-24 114.4 128 44.5
BcaC03g15031 Brassica carinata HOM05D001285 ORTHO05D000199 2.3e-23 112.8 119 49.6
C05p19190 Brassica napus HOM05D001285 ORTHO05D000199 8.7e-23 110.9 108 40.7
BolC5t30619H Brassica oleracea HOM05D001285 ORTHO05D000199 8.7e-23 110.9 108 40.7
Sp3g26120 Schrenkiella parvula HOM05D001285 ORTHO05D015508 2.1e-21 106.3 121 45.5
AL3G45900 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 2.4e-20 102.8 131 41.2
BcaB04g17599 Brassica carinata HOM05D001285 ORTHO05D000199 4.0e-20 102.1 95 50.5
Carub.0027s0004 Capsella rubella HOM05D001285 ORTHO05D000199 1.5e-19 100.1 124 44.4
Thhalv10001219m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.5e-19 100.1 122 41.0
Thhalv10002270m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 5.8e-19 98.2 121 41.3
BcaC08g44579 Brassica carinata HOM05D001285 ORTHO05D000199 1.0e-18 97.4 107 46.7
Carub.0004s0691 Capsella rubella HOM05D001285 ORTHO05D000199 1.3e-18 97.1 124 44.4
AL6G41380 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 2.2e-18 96.3 121 40.5
Thhalv10005449m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.2e-18 96.3 122 40.2
Thhalv10009813m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.9e-18 95.9 126 39.7
BcaC02g10464 Brassica carinata HOM05D001285 ORTHO05D000199 3.8e-18 95.5 115 46.1
BraA06t25595Z Brassica rapa HOM05D001285 ORTHO05D000199 5.0e-18 95.1 126 44.4
Thhalv10015545m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.4e-17 93.6 125 39.2
AL1G60090 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 2.5e-17 92.8 125 39.2
BcaB02g11283 Brassica carinata HOM05D001285 ORTHO05D000199 4.2e-17 92.0 129 44.2
BcaC06g34326 Brassica carinata HOM05D001285 ORTHO05D000199 4.2e-17 92.0 79 51.9
Thhalv10011096m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 5.5e-17 91.7 127 40.9
BolC1t02405H Brassica oleracea HOM05D001285 ORTHO05D000199 7.1e-17 91.3 54 85.2
Thhalv10021955m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 7.1e-17 91.3 127 40.9
AL6G42160 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 9.3e-17 90.9 133 39.8
AT5G45570 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 1.2e-16 90.5 123 36.6
Carub.0003s3058 Capsella rubella HOM05D001285 ORTHO05D000199 1.6e-16 90.1 132 40.2
AL1G51180 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 4.6e-16 88.6 125 37.6
AL6G40760 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.0e-15 87.4 112 42.0
Carub.0006s2832 Capsella rubella HOM05D001285 ORTHO05D000199 1.8e-15 86.7 146 35.6
Thhalv10005571m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.8e-15 86.7 120 38.3
AT4G08430 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 2.3e-15 86.3 123 35.8
Carub.0005s0342 Capsella rubella HOM05D001285 ORTHO05D000199 2.3e-15 86.3 123 38.2
Thhalv10002866m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 3.0e-15 85.9 84 50.0
C09p65970 Brassica napus HOM05D001285 ORTHO05D000199 3.9e-15 85.5 134 38.1
AL1G65960 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 5.1e-15 85.1 120 40.8
CARHR185190 Cardamine hirsuta HOM05D001285 ORTHO05D000199 5.1e-15 85.1 125 38.4
C05p29930 Brassica napus HOM05D001285 ORTHO05D000199 6.7e-15 84.7 85 48.2
BcaB01g01002 Brassica carinata HOM05D001285 ORTHO05D000199 8.7e-15 84.3 71 50.7
A02p24110 Brassica napus HOM05D001285 ORTHO05D000199 8.7e-15 84.3 85 48.2
BolC9t59420H Brassica oleracea HOM05D001285 ORTHO05D000199 8.7e-15 84.3 134 37.3
AL8G24550 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.5e-14 83.6 125 34.4
A01p19020 Brassica napus HOM05D001285 ORTHO05D000199 1.5e-14 83.6 85 48.2
Thhalv10002320m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.9e-14 83.2 120 36.7
C01p35070 Brassica napus HOM05D001285 ORTHO05D033054 3.3e-14 82.4 92 50.0
BolC1t03470H Brassica oleracea HOM05D001285 ORTHO05D033054 3.3e-14 82.4 92 50.0
C02p25810 Brassica napus HOM05D001285 ORTHO05D000199 9.7e-14 80.9 85 45.9
CARHR033910 Cardamine hirsuta HOM05D001285 ORTHO05D000199 1.3e-13 80.5 129 36.4
AT1G37020 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 1.6e-13 80.1 124 35.5
CARHR116190 Cardamine hirsuta HOM05D001285 ORTHO05D000199 1.6e-13 80.1 124 37.9
BraA09t39171Z Brassica rapa HOM05D001285 ORTHO05D033054 3.7e-13 79.0 61 59.0
BcaB03g15498 Brassica carinata HOM05D001285 ORTHO05D000199 4.8e-13 78.6 44 72.7
BcaC08g44187 Brassica carinata HOM05D001285 ORTHO05D000199 4.8e-13 78.6 134 35.1
Thhalv10029511m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 4.8e-13 78.6 97 39.2
Carub.0004s0683 Capsella rubella HOM05D001285 ORTHO05D000199 8.2e-13 77.8 99 39.4
Thhalv10015990m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 8.2e-13 77.8 97 39.2
Thhalv10019812m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.1e-12 77.4 97 39.2
Thhalv10023182m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.1e-12 77.4 97 39.2
AT5G28235 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 2.4e-12 76.3 99 36.4
Thhalv10003114m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 3.1e-12 75.9 97 38.1
Carub.0008s0635 Capsella rubella HOM05D001285 ORTHO05D000199 4.1e-12 75.5 137 32.1
C02p37580 Brassica napus HOM05D001285 ORTHO05D015508 5.3e-12 75.1 59 45.8
BcaB06g25750 Brassica carinata HOM05D001285 ORTHO05D000199 2.0e-11 73.2 98 31.6
BolC9t56617H Brassica oleracea HOM05D001285 ORTHO05D000199 4.5e-11 72.0 127 33.9
BcaC02g11078 Brassica carinata HOM05D001285 ORTHO05D000199 5.9e-11 71.6 137 30.7
BraSC41t46221Z Brassica rapa HOM05D001285 ORTHO05D000199 1.0e-10 70.9 100 42.0
CARHR153270 Cardamine hirsuta HOM05D001285 ORTHO05D000199 5.0e-10 68.6 137 32.8
Thhalv10003101m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 5.0e-10 68.6 98 39.8
BolC5t31726H Brassica oleracea HOM05D001285 ORTHO05D000199 4.2e-09 65.5 112 31.2
BolC2t07861H Brassica oleracea HOM05D001285 ORTHO05D000199 1.2e-08 63.9 112 29.5
C06p20440 Brassica napus HOM05D001285 ORTHO05D000199 2.1e-08 63.2 69 40.6
Thhalv10015694m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.1e-08 63.2 140 27.1
Sp1g37620 Schrenkiella parvula HOM05D001285 ORTHO05D000199 3.6e-08 62.4 62 41.9
BcaC03g15380 Brassica carinata HOM05D001285 ORTHO05D000199 2.3e-07 59.7 55 47.3
CARHR117480 Cardamine hirsuta HOM05D001285 ORTHO05D000199 2.3e-07 59.7 79 36.7
Aa31LG11G7310 Aethionema arabicum HOM05D000471 ORTHO05D000199 3.0e-07 59.3 111 35.1
Thhalv10023178m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 3.9e-07 58.9 97 34.0
Thhalv10015902m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.1e-06 57.4 97 33.0
Thhalv10023880m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.5e-06 57.0 134 29.1
Thhalv10027106m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.5e-06 57.0 55 41.8
C06p09110 Brassica napus HOM05D000471 ORTHO05D000199 2.5e-06 56.2 110 25.5
SGA_v2.0_scaffold9G04780 Striga asiatica HOM05D008585 ORTHO05D000397 2.5e-06 56.2 153 30.7
Carub.0025s0007 Capsella rubella HOM05D001285 ORTHO05D000199 3.3e-06 55.8 63 38.1
C04p39280 Brassica napus HOM05D000471 ORTHO05D000199 7.4e-06 54.7 110 25.5
BolC4t25495H Brassica oleracea HOM05D000471 ORTHO05D000199 7.4e-06 54.7 110 25.5


User provided reference genes

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