Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p37340 Brassica napus HOM05D004586 ORTHO05D005266 5.7e-253 877.5 576 100.0
BraA08t35631Z Brassica rapa HOM05D004586 ORTHO05D005266 8.9e-222 773.9 497 91.1
C08p00660 Brassica napus HOM05D004586 ORTHO05D005266 2.3e-209 732.6 486 84.4
Sp1g02460 Schrenkiella parvula HOM05D004586 ORTHO05D005266 4.2e-163 578.9 417 73.6
Thhalv10006867m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 2.8e-159 566.2 534 66.9
AL1G13040 Arabidopsis lyrata HOM05D004586 ORTHO05D005266 2.1e-154 550.1 404 72.3
AT1G03530 Arabidopsis thaliana HOM05D004586 ORTHO05D005266 2.5e-147 526.6 409 69.9
BcaB02g06919 Brassica carinata HOM05D004586 ORTHO05D005266 3.0e-145 519.6 413 68.8
Carub.0001s0267 Capsella rubella HOM05D004586 ORTHO05D005266 3.3e-144 516.2 420 66.4
CARHR002890 Cardamine hirsuta HOM05D004586 ORTHO05D005266 3.3e-144 516.2 565 60.9
C05p01990 Brassica napus HOM05D004586 ORTHO05D005266 7.0e-134 481.9 496 66.1
BcaC05g24523 Brassica carinata HOM05D004586 ORTHO05D005266 6.8e-129 465.3 393 67.2
BolC5t28977H Brassica oleracea HOM05D004586 ORTHO05D005266 6.8e-129 465.3 393 67.2
BraA10t42477Z Brassica rapa HOM05D000330 ORTHO05D000209 1.3e-127 461.1 386 67.4
A10p02080 Brassica napus HOM05D000330 ORTHO05D005266 2.8e-122 443.4 421 61.8
Thhalv10024822m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 9.8e-120 434.9 369 62.9
BolC8t46864H Brassica oleracea HOM05D004586 ORTHO05D005266 1.7e-119 434.1 307 87.3
Aa31LG1G20890 Aethionema arabicum HOM05D004586 ORTHO05D005266 4.0e-97 359.8 406 55.2
THA.LOC104826023 Tarenaya hassleriana HOM05D004586 ORTHO05D005266 4.2e-86 323.2 447 48.3
Actinidia12449 Actinidia chinensis HOM05D004586 ORTHO05D005266 3.8e-63 246.9 408 42.6
Sabra13G0117000 Salix brachista HOM05D004586 ORTHO05D005266 4.9e-63 246.5 409 43.3
Haze_13103 Corylus avellana HOM05D004586 ORTHO05D005266 7.1e-62 242.7 416 42.8
Hma1.2p1_0875F.1_g231553 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 2.1e-61 241.1 401 41.9
Hma1.2p1_0875F.1_g231580 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 2.1e-61 241.1 401 41.9
Manes.12G079600 Manihot esculenta HOM05D004586 ORTHO05D005266 2.1e-61 241.1 434 40.8
Actinidia09891 Actinidia chinensis HOM05D004586 ORTHO05D005266 3.5e-61 240.4 397 43.6
SGA_v2.0_scaffold159G37633 Striga asiatica HOM05D004586 ORTHO05D005266 4.6e-61 240.0 423 41.8
CSS0039758 Camellia sinensis var. sinensis HOM05D004586 ORTHO05D005266 6.0e-61 239.6 420 41.2
Nitab4.5_0009520g0030 Nicotiana tabacum HOM05D004586 ORTHO05D005266 6.0e-61 239.6 415 41.4
Potri.013G145300 Populus trichocarpa HOM05D004586 ORTHO05D005266 1.0e-60 238.8 417 42.2
Peaxi162Scf00007g02845 Petunia axillaris HOM05D004586 ORTHO05D005266 1.8e-60 238.0 383 43.6
SalBow1G4799 Salvia bowleyana HOM05D004586 ORTHO05D005266 1.8e-60 238.0 403 42.2
SalBow7G1236 Salvia bowleyana HOM05D004586 ORTHO05D005266 1.8e-60 238.0 403 42.2
Cfa014556 Carpinus fangiana HOM05D004586 ORTHO05D005266 3.9e-60 236.9 412 42.5
FAN09G2343 Fragaria x ananassa HOM05D004586 ORTHO05D005266 5.1e-60 236.5 388 44.3
Eucgr.B03848 Eucalyptus grandis HOM05D004586 ORTHO05D005266 6.7e-60 236.1 416 43.5
FvH4_6g44910 Fragaria vesca HOM05D004586 ORTHO05D005266 6.7e-60 236.1 419 43.0
Nitab4.5_0003018g0070 Nicotiana tabacum HOM05D004586 ORTHO05D005266 2.5e-59 234.2 413 40.0
GSVIVG01030569001 Vitis vinifera HOM05D004586 ORTHO05D005266 2.5e-59 234.2 368 43.2
Duzib106G1111 Durio zibethinus HOM05D004586 ORTHO05D005266 3.3e-59 233.8 416 41.8
RcHm_v2.0_Chr2g0162091 Rosa chinensis HOM05D004586 ORTHO05D005266 4.3e-59 233.4 394 42.1
Ciclev10014470m.g Citrus clementina HOM05D004586 ORTHO05D005266 7.4e-59 232.6 427 42.4
PGSC0003DMG400018364 Solanum tuberosum HOM05D004586 ORTHO05D005266 9.6e-59 232.3 410 41.5
SGA_v2.0_scaffold49G18309 Striga asiatica HOM05D004586 ORTHO05D005266 9.6e-59 232.3 377 42.7
TWI36G0730 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 9.6e-59 232.3 427 41.7
FAN05G3704 Fragaria x ananassa HOM05D004586 ORTHO05D005266 1.6e-58 231.5 401 43.9
TAR627G0949 Trochodendron aralioides HOM05D004586 ORTHO05D005266 1.6e-58 231.5 413 40.2
FAN14G4866 Fragaria x ananassa HOM05D004586 ORTHO05D005266 3.7e-58 230.3 374 42.5
Atru.chr6.3049 Acer truncatum HOM05D004586 ORTHO05D005266 4.8e-58 229.9 436 43.3
FAN02G1766 Fragaria x ananassa HOM05D004586 ORTHO05D005266 6.2e-58 229.6 382 42.1
Oeu025511.1 Olea europaea HOM05D004586 ORTHO05D005266 6.2e-58 229.6 397 41.6
Solyc07g054460.4 Solanum lycopersicum HOM05D004586 ORTHO05D005266 6.2e-58 229.6 411 41.4
Potri.019G104400 Populus trichocarpa HOM05D004586 ORTHO05D005266 8.2e-58 229.2 364 44.2
MD09G1092000 Malus domestica HOM05D004586 ORTHO05D005266 1.1e-57 228.8 415 41.2
Lalb_Chr01g0005391 Lupinus albus HOM05D004586 ORTHO05D005266 1.4e-57 228.4 399 41.1
PGR042G3101 Punica granatum HOM05D004586 ORTHO05D005266 2.4e-57 227.6 421 40.9
CiPaw.03G171000 Carya illinoinensis HOM05D004586 ORTHO05D005266 1.2e-56 225.3 366 41.8
CsaV3_2G036510 Cucumis sativus L. HOM05D004586 ORTHO05D005266 1.2e-56 225.3 232 54.7
Cpa.g.sc34.112 Carica papaya HOM05D004586 ORTHO05D005266 1.5e-56 224.9 302 46.0
Lsat_1_v5_gn_4_68860 Lactuca sativa HOM05D004586 ORTHO05D005266 5.8e-56 223.0 370 43.0
ClCG02G017410 Citrullus lanatus HOM05D004586 ORTHO05D005266 7.6e-56 222.6 249 52.2
Duzib052G0504 Durio zibethinus HOM05D004586 ORTHO05D005266 1.3e-55 221.9 433 40.6
Sopen07g028400 Solanum pennellii HOM05D004586 ORTHO05D005266 1.7e-55 221.5 403 40.0
TPR.G21660 Trifolium pratense HOM05D004586 ORTHO05D005266 2.2e-55 221.1 202 58.4
MSTRG.14187 Avicennia marina HOM05D004586 ORTHO05D005266 2.9e-55 220.7 385 40.0
Thecc.02G173500 Theobroma cacao HOM05D004586 ORTHO05D005266 5.0e-55 219.9 424 40.1
MBI02_g10548_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 6.5e-55 219.5 225 53.3
Migut.H01030 Erythranthe guttata HOM05D004586 ORTHO05D005266 1.1e-54 218.8 198 56.6
HanXRQChr14g0441421 Helianthus annuus HOM05D004586 ORTHO05D005266 1.1e-54 218.8 220 53.2
Lj1C734T7 Lonicera japonica HOM05D004586 ORTHO05D005266 1.1e-54 218.8 297 45.1
ECA234G1777 Erigeron canadensis HOM05D004586 ORTHO05D005266 1.4e-54 218.4 247 49.8
Gorai.013G166800 Gossypium raimondii HOM05D004586 ORTHO05D005266 1.4e-54 218.4 440 41.4
Sed0007770 Sechium edule HOM05D004586 ORTHO05D005266 3.2e-54 217.2 394 42.4
TWI18G0514 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 3.2e-54 217.2 238 53.4
Gohir.A13G144300 Gossypium hirsutum HOM05D004586 ORTHO05D005266 5.5e-54 216.5 435 41.4
QL10p048480 Quercus lobata HOM05D004586 ORTHO05D005266 5.5e-54 216.5 362 42.0
CAN.G78.83 Capsicum annuum HOM05D004586 ORTHO05D005266 1.2e-53 215.3 386 40.9
Prupe.3G233000 Prunus persica HOM05D004586 ORTHO05D005266 1.2e-53 215.3 427 39.6
HanXRQChr05g0140481 Helianthus annuus HOM05D004586 ORTHO05D005266 1.6e-53 214.9 383 41.5
MD17G1081900 Malus domestica HOM05D004586 ORTHO05D005266 2.7e-53 214.2 414 40.6
Gohir.D13G149100 Gossypium hirsutum HOM05D004586 ORTHO05D005266 3.5e-53 213.8 441 40.8
Lj3g0023901 Lotus japonicus HOM05D004586 ORTHO05D005266 6.1e-53 213.0 384 40.1
Medtr0072s0050 Medicago truncatula HOM05D004586 ORTHO05D005266 1.0e-52 212.2 211 56.4
CANSAT64G2104 Cannabis sativa HOM05D004586 ORTHO05D005266 1.3e-52 211.8 428 39.7
MELO3C003861.2 Cucumis melo HOM05D004586 ORTHO05D005266 5.1e-52 209.9 404 40.6
MELO3C021880.2 Cucumis melo HOM05D004586 ORTHO05D005266 5.1e-52 209.9 178 60.1
PSO384G2677 Papaver somniferum HOM05D004586 ORTHO05D005266 6.7e-52 209.5 177 58.2
Sc12g0002770 Simmondsia chinensis HOM05D004586 ORTHO05D005266 6.7e-52 209.5 230 50.9
arahy.Tifrunner.gnm1.ann1.FC6AAX Arachis hypogaea HOM05D004586 ORTHO05D005266 8.7e-52 209.1 384 40.1
Ca_27565_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 1.9e-51 208.0 342 42.7
PSO541G0834 Papaver somniferum HOM05D004586 ORTHO05D005266 3.3e-51 207.2 301 43.5
PSO675G0516 Papaver somniferum HOM05D004586 ORTHO05D005266 4.3e-51 206.8 301 43.9
EL10As5g23555 Beta vulgaris HOM05D004586 ORTHO05D005266 5.7e-51 206.5 217 52.1
ATR0693G407 Amborella trichopoda HOM05D004586 ORTHO05D005266 7.4e-51 206.1 209 53.6
COL.COLO4_13701 Corchorus olitorius HOM05D004586 ORTHO05D005266 9.7e-51 205.7 463 39.3
COL.COLO4_08510 Corchorus olitorius HOM05D004586 ORTHO05D005266 1.6e-50 204.9 186 57.0
Rhsim06G0149700 Rhododendron simsii HOM05D004586 ORTHO05D005266 1.4e-49 201.8 374 38.2
vmacro12267 Vaccinium macrocarpon HOM05D004586 ORTHO05D005266 2.4e-49 201.1 416 37.0
Phvul.011G112400 Phaseolus vulgaris HOM05D004586 ORTHO05D005266 3.1e-49 200.7 362 40.3
AUR62035735 Chenopodium quinoa HOM05D004586 ORTHO05D005266 9.0e-49 199.1 453 35.3
VMungo1127G2109 Vigna mungo HOM05D004586 ORTHO05D005266 9.0e-49 199.1 397 39.5
arahy.Tifrunner.gnm1.ann1.SANC69 Arachis hypogaea HOM05D004586 ORTHO05D005266 1.5e-48 198.4 401 38.7
Ca_20687_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 1.5e-48 198.4 384 39.8
unitig_26.g9937 Utricularia gibba HOM05D004586 ORTHO05D005266 1.5e-48 198.4 254 43.7
Psat0s4261g0040 Pisum sativum HOM05D004586 ORTHO05D005266 3.8e-47 193.7 369 42.0
SHI10466 Sapria himalayana HOM05D004586 ORTHO05D005266 3.8e-47 193.7 443 34.8
Cc00_g21120 Coffea canephora HOM05D004586 ORTHO05D005266 1.9e-46 191.4 405 39.0
Nn1g03938 Nelumbo nucifera HOM05D004586 ORTHO05D005266 1.9e-46 191.4 181 54.1
TAR629G0893 Trochodendron aralioides HOM05D004586 ORTHO05D005266 2.5e-46 191.0 394 37.1
Medtr2g090095 Medicago truncatula HOM05D004586 ORTHO05D005266 9.4e-46 189.1 217 49.8
Peaxi162Scf00485g00032 Petunia axillaris HOM05D004586 ORTHO05D005266 1.2e-45 188.7 462 35.3
CAN.G996.7 Capsicum annuum HOM05D004586 ORTHO05D005266 4.6e-45 186.8 399 37.3
Glyma.06G297000 Glycine max HOM05D004586 ORTHO05D005266 1.0e-44 185.7 369 39.3
CDE02G0135 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 2.3e-44 184.5 278 45.3
Glyma.12G108100 Glycine max HOM05D004586 ORTHO05D005266 5.1e-44 183.3 370 38.6
AUR62000198 Chenopodium quinoa HOM05D004586 ORTHO05D005266 6.7e-44 183.0 417 35.3
Psat5g270160 Pisum sativum HOM05D004586 ORTHO05D005266 6.7e-44 183.0 206 49.5
Hund09647 Selenicereus undatus HOM05D004586 ORTHO05D005266 6.7e-44 183.0 367 36.8
SEGI_15076 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 5.7e-43 179.9 227 46.7
Ah.01g003940 Amaranthus hybridus HOM05D004586 ORTHO05D005266 6.3e-42 176.4 315 39.4
TPR.G27075 Trifolium pratense HOM05D004586 ORTHO05D005266 1.1e-41 175.6 194 53.1
Nitab4.5_0007732g0010 Nicotiana tabacum HOM05D004586 ORTHO05D005266 4.1e-41 173.7 185 51.9
DCAR_019194 Daucus carota HOM05D004586 ORTHO05D005266 6.9e-41 172.9 321 40.8
arahy.Tifrunner.gnm1.ann1.IS01QF Arachis hypogaea HOM05D004586 ORTHO05D005266 9.1e-41 172.6 174 53.4
BcaB08g36102 Brassica carinata HOM05D004586 ORTHO05D005266 9.1e-41 172.6 135 69.6
Os05g0502800 Oryza sativa ssp. japonica HOM05D004586 ORTHO05D005266 1.2e-40 172.2 362 37.0
BcaB01g00913 Brassica carinata HOM05D004586 ORTHO05D005266 2.0e-40 171.4 135 68.9
HPP92_014062 Vanilla planifolia HOM05D004586 ORTHO05D005266 2.0e-40 171.4 420 36.2
Lj3g0000702 Lotus japonicus HOM05D004586 ORTHO05D005266 5.9e-40 169.9 331 40.2
arahy.Tifrunner.gnm1.ann1.7D4Z5S Arachis hypogaea HOM05D004586 ORTHO05D005266 1.4e-38 165.2 223 48.0
Dinv15471 Davidia involucrata HOM05D004586 ORTHO05D005266 3.6e-37 160.6 381 34.4
Zm00001eb292050 Zea mays HOM05D004586 ORTHO05D005266 5.1e-36 156.8 333 36.6
CBR_g12767 Chara braunii HOM05D004586 ORTHO05D005266 1.5e-35 155.2 267 41.2
Lalb_Chr22g0356411 Lupinus albus HOM05D004586 ORTHO05D005266 2.6e-35 154.5 207 44.0
SEGI_36208 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 7.7e-32 142.9 141 53.2
SMO137G0274 Selaginella moellendorffii HOM05D004586 ORTHO05D005266 6.5e-31 139.8 194 39.7
Pp3c14_14050 Physcomitrium patens HOM05D004586 ORTHO05D005266 1.9e-30 138.3 169 43.8
CDE02G4059 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 1.2e-29 135.6 346 35.5
Mapoly0108s0039 Marchantia polymorpha HOM05D004586 ORTHO05D005266 2.7e-29 134.4 164 47.0
Pp3c10_10230 Physcomitrium patens HOM05D004586 ORTHO05D005266 8.0e-29 132.9 192 40.1
AagrBONN_evm.TU.Sc2ySwM_117.2920 Anthoceros agrestis HOM05D004586 ORTHO05D005266 2.3e-28 131.3 281 37.0
MBI02_g27225_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 1.3e-26 125.6 388 31.7
Psat0s10217g0080 Pisum sativum HOM05D004586 ORTHO05D005266 2.7e-16 91.3 96 54.2
Medtr7g116780 Medicago truncatula HOM05D004586 ORTHO05D005266 2.5e-14 84.7 71 52.1
PSO339G0898 Papaver somniferum HOM05D004586 ORTHO05D005266 2.3e-12 78.2 93 44.1
MCO05G032 Micromonas commoda HOM05D004586 ORTHO05D005266 9.8e-11 72.8 197 33.0
DCAR_012988 Daucus carota HOM05D004586 ORTHO05D005266 7.0e-09 66.6 98 41.8
Cre10.g467100 Chlamydomonas reinhardtii HOM05D004586 ORTHO05D005266 7.3e-06 56.6 187 29.4


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