Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p36630 Brassica napus HOM05D004413 ORTHO05D005199 1.0e-237 826.2 396 100.0
BraA08t35565Z Brassica rapa HOM05D004413 ORTHO05D005199 1.0e-237 826.2 396 100.0
C08p01610 Brassica napus HOM05D004413 ORTHO05D005199 1.4e-213 746.1 398 92.2
BolC8t46964H Brassica oleracea HOM05D004413 ORTHO05D005199 1.4e-213 746.1 398 92.2
BcaC07g36870 Brassica carinata HOM05D004413 ORTHO05D005199 1.6e-209 732.6 385 92.5
BcaB03g13464 Brassica carinata HOM05D004413 ORTHO05D005199 4.0e-205 718.0 384 90.4
Carub.0001s0418 Capsella rubella HOM05D004413 ORTHO05D005199 4.8e-166 588.2 395 73.7
AT1G04945 Arabidopsis thaliana HOM05D004413 ORTHO05D005199 2.0e-164 582.8 399 73.9
Sp1g03790 Schrenkiella parvula HOM05D004413 ORTHO05D005199 4.9e-163 578.2 397 73.3
Aa31LG1G19950 Aethionema arabicum HOM05D004413 ORTHO05D005199 2.3e-160 569.3 403 71.2
AL1G14670 Arabidopsis lyrata HOM05D004413 ORTHO05D005199 1.5e-156 556.6 399 71.4
Thhalv10007024m.g Eutrema salsugineum HOM05D004413 ORTHO05D005199 2.9e-155 552.4 423 67.6
CARHR004350 Cardamine hirsuta HOM05D004413 ORTHO05D005199 5.3e-149 531.6 398 67.8
THA.LOC104826126 Tarenaya hassleriana HOM05D004413 ORTHO05D005199 5.0e-131 471.9 398 59.8
GSVIVG01001402001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.6e-116 423.7 386 55.7
Thecc.01G415800 Theobroma cacao HOM05D004413 ORTHO05D005199 3.8e-115 419.1 409 54.5
Gohir.A08G005500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 1.1e-114 417.5 409 54.3
Gohir.A01G019401 Gossypium hirsutum HOM05D004413 ORTHO05D005199 5.5e-114 415.2 404 54.2
Gohir.D08G167400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 5.5e-114 415.2 409 54.0
Gohir.A08G146400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 9.4e-114 414.5 409 54.0
Gorai.004G174800 Gossypium raimondii HOM05D004413 ORTHO05D005199 1.6e-113 413.7 409 54.0
A06p04180 Brassica napus HOM05D004413 ORTHO05D005199 1.4e-112 410.6 282 73.4
BraA06t23623Z Brassica rapa HOM05D004413 ORTHO05D005199 1.8e-112 410.2 282 72.7
Duzib138G1189 Durio zibethinus HOM05D004413 ORTHO05D005199 4.0e-112 409.1 407 54.3
BcaC08g43081 Brassica carinata HOM05D004413 ORTHO05D005199 1.2e-111 407.5 282 73.0
MD07G1003300 Malus domestica HOM05D004413 ORTHO05D005199 1.5e-111 407.1 409 53.5
Manes.10G150400 Manihot esculenta HOM05D004413 ORTHO05D005199 3.3e-111 406.0 420 52.1
C06p03410 Brassica napus HOM05D004413 ORTHO05D005199 1.3e-110 404.1 282 72.7
BolC6t35480H Brassica oleracea HOM05D004413 ORTHO05D005199 1.3e-110 404.1 282 72.7
Haze_03259 Corylus avellana HOM05D004413 ORTHO05D005199 6.3e-110 401.7 419 50.4
Ciclev10031642m.g Citrus clementina HOM05D004413 ORTHO05D005199 1.1e-109 401.0 407 53.1
COL.COLO4_30064 Corchorus olitorius HOM05D004413 ORTHO05D005199 1.1e-109 401.0 416 52.9
CSS0018065 Camellia sinensis var. sinensis HOM05D004413 ORTHO05D005199 2.4e-109 399.8 377 56.0
MD02G1318000 Malus domestica HOM05D004413 ORTHO05D005199 2.4e-109 399.8 409 53.1
TWI09G1219 Tripterygium wilfordii HOM05D004413 ORTHO05D005199 5.3e-109 398.7 413 52.3
Phvul.004G126300 Phaseolus vulgaris HOM05D004413 ORTHO05D005199 1.2e-108 397.5 417 51.1
FAN13G1137 Fragaria x ananassa HOM05D004413 ORTHO05D005199 2.9e-107 392.9 415 52.0
Atru.chr11.2687 Acer truncatum HOM05D004413 ORTHO05D005199 3.8e-107 392.5 425 50.6
Cfa010719 Carpinus fangiana HOM05D004413 ORTHO05D005199 3.8e-107 392.5 418 49.5
RcHm_v2.0_Chr7g0230361 Rosa chinensis HOM05D004413 ORTHO05D005199 3.8e-107 392.5 416 52.6
FvH4_5g32720 Fragaria vesca HOM05D004413 ORTHO05D005199 5.0e-107 392.1 415 52.0
FAN18G0644 Fragaria x ananassa HOM05D004413 ORTHO05D005199 5.0e-107 392.1 415 52.0
arahy.Tifrunner.gnm1.ann1.X2RX6E Arachis hypogaea HOM05D004413 ORTHO05D005199 6.5e-107 391.7 407 52.6
Cpa.g.sc189.31 Carica papaya HOM05D004413 ORTHO05D005199 5.5e-106 388.7 387 53.5
VMungo0464G1648 Vigna mungo HOM05D004413 ORTHO05D005199 1.2e-105 387.5 417 49.4
Lalb_Chr19g0124241 Lupinus albus HOM05D004413 ORTHO05D005199 1.6e-105 387.1 417 52.0
arahy.Tifrunner.gnm1.ann1.8FHU3N Arachis hypogaea HOM05D004413 ORTHO05D005199 6.1e-105 385.2 422 50.7
Glyma.16G203400 Glycine max HOM05D004413 ORTHO05D005199 6.1e-105 385.2 407 51.4
TAR636G2532 Trochodendron aralioides HOM05D004413 ORTHO05D005199 1.0e-104 384.4 425 49.4
CANSAT64G0940 Cannabis sativa HOM05D004413 ORTHO05D005199 3.0e-104 382.9 445 47.6
Potri.001G228000 Populus trichocarpa HOM05D004413 ORTHO05D005199 3.0e-104 382.9 429 50.3
FAN08G0618 Fragaria x ananassa HOM05D004413 ORTHO05D005199 5.2e-104 382.1 424 50.5
Oeu013591.1 Olea europaea HOM05D004413 ORTHO05D005199 6.8e-104 381.7 357 54.1
TPR.G25309 Trifolium pratense HOM05D004413 ORTHO05D005199 8.8e-104 381.3 389 54.0
Sc17g0005470 Simmondsia chinensis HOM05D004413 ORTHO05D005199 1.5e-103 380.6 393 51.4
Glyma.09G152600 Glycine max HOM05D004413 ORTHO05D005199 9.8e-103 377.9 409 50.4
TPR.G37653 Trifolium pratense HOM05D004413 ORTHO05D005199 9.8e-103 377.9 407 51.4
QL04p000397 Quercus lobata HOM05D004413 ORTHO05D005199 1.3e-102 377.5 481 44.9
QL04p002426 Quercus lobata HOM05D004413 ORTHO05D005199 3.7e-102 375.9 461 46.2
Ca_02163_v3 Cicer arietinum L. HOM05D004413 ORTHO05D005199 4.8e-102 375.6 401 50.6
Sed0007945 Sechium edule HOM05D004413 ORTHO05D005199 3.1e-101 372.9 410 48.3
Medtr6g463300 Medicago truncatula HOM05D004413 ORTHO05D005199 4.1e-101 372.5 409 50.9
CANSAT01G0573 Cannabis sativa HOM05D004413 ORTHO05D005199 1.6e-100 370.5 436 47.7
CANSAT01G1789 Cannabis sativa HOM05D004413 ORTHO05D005199 1.6e-100 370.5 436 47.9
Sabra16G0135900 Salix brachista HOM05D004413 ORTHO05D005199 5.0e-99 365.5 425 49.4
ClCG09G003830 Citrullus lanatus HOM05D004413 ORTHO05D005199 6.6e-99 365.2 416 46.6
Psat1g110760 Pisum sativum HOM05D004413 ORTHO05D005199 6.6e-99 365.2 414 50.5
MSTRG.28094 Avicennia marina HOM05D004413 ORTHO05D005199 5.5e-98 362.1 413 48.7
GSVIVG01037065001 Vitis vinifera HOM05D004413 ORTHO05D005199 9.5e-98 361.3 278 64.0
Dinv43918 Davidia involucrata HOM05D004413 ORTHO05D005199 1.6e-97 360.5 396 49.5
Migut.N01644 Erythranthe guttata HOM05D004413 ORTHO05D005199 2.8e-97 359.8 362 51.1
SGA_v2.0_scaffold95G28780 Striga asiatica HOM05D004413 ORTHO05D005199 4.7e-97 359.0 372 52.2
Lj2g0027526 Lotus japonicus HOM05D004413 ORTHO05D005199 6.1e-97 358.6 404 49.3
Sed0010518 Sechium edule HOM05D004413 ORTHO05D005199 1.4e-96 357.5 396 47.5
CiPaw.16G012500 Carya illinoinensis HOM05D004413 ORTHO05D005199 3.0e-96 356.3 389 49.4
vmacro21162 Vaccinium macrocarpon HOM05D004413 ORTHO05D005199 3.0e-96 356.3 437 46.5
Psat6g015760 Pisum sativum HOM05D004413 ORTHO05D005199 6.8e-96 355.1 339 55.5
Aqoxy2G00074 Aquilegia oxysepala HOM05D004413 ORTHO05D005199 2.6e-95 353.2 363 51.8
Nitab4.5_0001006g0010 Nicotiana tabacum HOM05D004413 ORTHO05D005199 4.4e-95 352.4 383 51.4
Nitab4.5_0000346g0070 Nicotiana tabacum HOM05D004413 ORTHO05D005199 7.5e-95 351.7 336 55.1
Solyc01g074020.3 Solanum lycopersicum HOM05D004413 ORTHO05D005199 9.8e-95 351.3 308 58.1
CsaV3_7G031400 Cucumis sativus L. HOM05D004413 ORTHO05D005199 2.2e-94 350.1 406 47.3
PGR031G3941 Punica granatum HOM05D004413 ORTHO05D005199 2.8e-94 349.7 400 47.8
AUR62035034 Chenopodium quinoa HOM05D004413 ORTHO05D005199 1.8e-93 347.1 421 45.8
Nn3g19386 Nelumbo nucifera HOM05D004413 ORTHO05D005199 2.4e-93 346.7 426 46.7
Rhsim01G0132100 Rhododendron simsii HOM05D004413 ORTHO05D005199 3.1e-93 346.3 491 44.0
CAN.G1393.6 Capsicum annuum HOM05D004413 ORTHO05D005199 1.6e-92 344.0 298 58.4
Lalb_Chr19g0124231 Lupinus albus HOM05D004413 ORTHO05D005199 4.5e-92 342.4 303 56.4
AUR62016087 Chenopodium quinoa HOM05D004413 ORTHO05D005199 7.8e-92 341.7 406 46.6
Peaxi162Scf01343g00011 Petunia axillaris HOM05D004413 ORTHO05D005199 8.6e-91 338.2 338 54.4
PSO210G0136 Papaver somniferum HOM05D004413 ORTHO05D005199 1.5e-90 337.4 398 46.5
Cc02_g27150 Coffea canephora HOM05D004413 ORTHO05D005199 1.9e-90 337.0 417 48.2
Prupe.2G005000 Prunus persica HOM05D004413 ORTHO05D005199 4.3e-90 335.9 409 47.2
Lsat_1_v5_gn_4_46341 Lactuca sativa HOM05D004413 ORTHO05D005199 5.6e-90 335.5 363 48.8
arahy.Tifrunner.gnm1.ann1.0XNQ2B Arachis hypogaea HOM05D004413 ORTHO05D005199 1.0e-88 331.3 396 46.0
arahy.Tifrunner.gnm1.ann1.MVM3BY Arachis hypogaea HOM05D004413 ORTHO05D005199 8.9e-88 328.2 403 45.9
Hma1.2p1_0038F.1_g024150 Hydrangea macrophylla HOM05D004413 ORTHO05D005199 1.5e-87 327.4 413 44.8
EL10Ac3g05776 Beta vulgaris HOM05D004413 ORTHO05D005199 2.0e-87 327.0 428 44.4
PSO210G4410 Papaver somniferum HOM05D004413 ORTHO05D005199 2.6e-87 326.6 401 46.4
PSO170G4481 Papaver somniferum HOM05D004413 ORTHO05D005199 4.4e-87 325.9 381 46.7
Atru.chr1.1383 Acer truncatum HOM05D004413 ORTHO05D005199 7.5e-87 325.1 273 59.7
Hund04656 Selenicereus undatus HOM05D004413 ORTHO05D005199 3.7e-86 322.8 400 44.5
Lj9A624G21 Lonicera japonica HOM05D004413 ORTHO05D005199 3.2e-85 319.7 415 46.5
HanXRQChr16g0520481 Helianthus annuus HOM05D004413 ORTHO05D005199 4.1e-85 319.3 332 50.3
HPP92_005742 Vanilla planifolia HOM05D004413 ORTHO05D005199 6.0e-84 315.5 407 45.0
CDE04G1207 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 1.0e-83 314.7 436 43.1
CDE12G0144 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 2.5e-82 310.1 435 43.0
MELO3C023518.2 Cucumis melo HOM05D004413 ORTHO05D005199 8.9e-80 301.6 400 44.0
Ah.07g208370 Amaranthus hybridus HOM05D004413 ORTHO05D005199 3.4e-79 299.7 416 43.0
SHI15877 Sapria himalayana HOM05D004413 ORTHO05D005199 5.4e-77 292.4 393 43.0
ATR0582G367 Amborella trichopoda HOM05D004413 ORTHO05D005199 8.6e-75 285.0 438 39.7
Os01g0962500 Oryza sativa ssp. japonica HOM05D004413 ORTHO05D005199 9.2e-69 265.0 289 49.1
Zm00001eb140340 Zea mays HOM05D004413 ORTHO05D005199 1.1e-66 258.1 295 47.8
unitig_578.g16701 Utricularia gibba HOM05D004413 ORTHO05D005199 4.3e-66 256.1 255 50.6
Actinidia21569 Actinidia chinensis HOM05D004413 ORTHO05D005199 1.2e-63 248.1 291 48.1
Gohir.A11G220500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 1.5e-63 247.7 292 47.9
SEGI_33976 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 7.6e-63 245.4 283 47.3
PGSC0003DMG400006318 Solanum tuberosum HOM05D004413 ORTHO05D005199 2.1e-60 237.3 230 54.8
ECA234G1090 Erigeron canadensis HOM05D004413 ORTHO05D005199 2.4e-56 223.8 332 41.9
Dinv43485 Davidia involucrata HOM05D004413 ORTHO05D005199 2.9e-54 216.9 169 61.5
Lj9A625T17 Lonicera japonica HOM05D004413 ORTHO05D005199 2.1e-52 210.7 354 39.5
Pp3c11_18200 Physcomitrium patens HOM05D004413 ORTHO05D005199 2.7e-52 210.3 295 41.0
SMO351G0528 Selaginella moellendorffii HOM05D004413 ORTHO05D005199 8.7e-51 205.3 294 40.1
SGA_v2.0_scaffold4G02237 Striga asiatica HOM05D004413 ORTHO05D005199 1.5e-50 204.5 190 55.3
Mapoly0103s0075 Marchantia polymorpha HOM05D004413 ORTHO05D005199 1.8e-43 181.0 297 39.4
PSO170G2986 Papaver somniferum HOM05D004413 ORTHO05D005199 5.1e-43 179.5 239 41.0
Sopen01g033590 Solanum pennellii HOM05D004413 ORTHO05D005199 6.7e-43 179.1 180 53.9
AagrBONN_evm.TU.Sc2ySwM_228.625 Anthoceros agrestis HOM05D004413 ORTHO05D005199 1.3e-41 174.9 280 41.1
GSVIVG01027705001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.1e-41 174.1 128 66.4
BraA09t42095Z Brassica rapa HOM05D004413 ORTHO05D005199 3.7e-41 173.3 109 77.1
Sopen01g033580 Solanum pennellii HOM05D004413 ORTHO05D005199 3.7e-41 173.3 138 60.9
Cre01.g049400 Chlamydomonas reinhardtii HOM05D004413 ORTHO05D005199 6.2e-41 172.6 244 39.8
DCAR_015691 Daucus carota HOM05D004413 ORTHO05D005199 6.9e-40 169.1 143 58.0
Aa31LG1G19980 Aethionema arabicum HOM05D004413 ORTHO05D005199 7.1e-37 159.1 178 51.1
CBR_g50781 Chara braunii HOM05D004413 ORTHO05D005199 7.1e-37 159.1 262 36.3
A08p37250 Brassica napus HOM05D004413 ORTHO05D005199 4.6e-36 156.4 72 97.2
Actinidia21570 Actinidia chinensis HOM05D004413 ORTHO05D005199 5.3e-32 142.9 101 65.3
SEGI_10444 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 4.5e-31 139.8 187 42.2
SEGI_03996 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 5.0e-30 136.3 187 42.2
GSVIVG01027710001 Vitis vinifera HOM05D004413 ORTHO05D005199 6.1e-28 129.4 104 63.5
Actinidia15863 Actinidia chinensis HOM05D004413 ORTHO05D005199 1.0e-27 128.6 80 73.8
HanXRQChr11g0328201 Helianthus annuus HOM05D004413 ORTHO05D005199 4.5e-23 113.2 71 73.2
MCO07G333 Micromonas commoda HOM05D004413 ORTHO05D005199 3.2e-21 107.1 266 28.6
GSVIVG01027698001 Vitis vinifera HOM05D004413 ORTHO05D005199 5.5e-21 106.3 63 69.8
PRCOL_00005718 Prasinoderma coloniale HOM05D004413 ORTHO05D005199 9.4e-21 105.5 169 39.1
DCAR_015690 Daucus carota HOM05D004413 ORTHO05D005199 2.1e-20 104.4 226 35.0
QL04p000430 Quercus lobata HOM05D004413 ORTHO05D005199 3.0e-19 100.5 201 30.8
GSVIVG01018194001 Vitis vinifera HOM05D004413 ORTHO05D005199 3.0e-19 100.5 79 54.4
Manes.10G149900 Manihot esculenta HOM05D000073 ORTHO05D000033 8.8e-19 99.0 58 75.9
Actinidia15864 Actinidia chinensis HOM05D004413 ORTHO05D005199 1.8e-16 91.3 51 72.5
GSVIVG01027696001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.9e-14 84.0 49 65.3
GSVIVG01027714001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.9e-14 84.0 171 38.6
TWI73G0758 Tripterygium wilfordii HOM05D004413 ORTHO05D005199 8.5e-14 82.4 96 45.8
TAR633G2579 Trochodendron aralioides HOM05D004413 ORTHO05D005199 8.5e-14 82.4 112 43.8
GSVIVG01026105001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.9e-13 81.3 63 61.9
GSVIVG01012403001 Vitis vinifera HOM05D004413 ORTHO05D005199 7.2e-13 79.3 53 67.9
Hma1.2p1_0276F.1_g111190 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 9.7e-10 68.9 68 48.5
GSVIVG01037069001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.4e-08 64.3 49 63.3
Nitab4.5_0003792g0060 Nicotiana tabacum HOM05D004413 ORTHO05D005199 1.5e-07 61.6 72 50.0


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