Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p33480 Brassica napus HOM05D004799 ORTHO05D005500 7.1e-108 394.0 213 100.0
BraA08t35264Z Brassica rapa HOM05D004799 ORTHO05D005500 7.3e-105 384.0 213 96.7
C08p14470 Brassica napus HOM05D004799 ORTHO05D005500 7.6e-102 374.0 213 95.3
BcaC07g38663 Brassica carinata HOM05D004799 ORTHO05D005500 8.4e-101 370.5 213 94.4
BolC8t49096H Brassica oleracea HOM05D004799 ORTHO05D005500 8.4e-101 370.5 213 94.4
Sp1g10030 Schrenkiella parvula HOM05D004799 ORTHO05D005500 4.5e-94 348.2 226 87.2
BcaB03g13259 Brassica carinata HOM05D004799 ORTHO05D005500 2.1e-91 339.3 227 85.0
Carub.0001s1103 Capsella rubella HOM05D004799 ORTHO05D005500 5.8e-86 321.2 220 81.4
A06p08020 Brassica napus HOM05D004799 ORTHO05D005500 2.1e-80 302.8 228 76.8
BraA06t24001Z Brassica rapa HOM05D004799 ORTHO05D005500 2.1e-80 302.8 228 76.8
BcaC05g25015 Brassica carinata HOM05D004799 ORTHO05D005500 1.4e-79 300.1 226 76.5
C05p09620 Brassica napus HOM05D004799 ORTHO05D005500 1.4e-79 300.1 226 76.5
BolC5t29704H Brassica oleracea HOM05D004799 ORTHO05D005500 1.4e-79 300.1 226 76.5
Aa31LG1G3310 Aethionema arabicum HOM05D004799 ORTHO05D005500 9.0e-79 297.4 226 74.8
AL1G22490 Arabidopsis lyrata HOM05D004799 ORTHO05D005500 1.4e-76 290.0 220 75.5
Thhalv10008698m.g Eutrema salsugineum HOM05D004799 ORTHO05D005500 1.0e-74 283.9 227 72.7
CARHR011640 Cardamine hirsuta HOM05D004799 ORTHO05D005500 2.3e-74 282.7 220 76.4
AT1G11400 Arabidopsis thaliana HOM05D004799 ORTHO05D005500 9.7e-73 277.3 220 74.5
THA.LOC104809537 Tarenaya hassleriana HOM05D004799 ORTHO05D005500 3.4e-70 268.9 228 70.6
Cpa.g.sc2.26 Carica papaya HOM05D004799 ORTHO05D005500 9.7e-57 224.2 227 59.9
Eucgr.I02711 Eucalyptus grandis HOM05D004799 ORTHO05D005500 1.3e-56 223.8 226 58.4
Duzib132G0636 Durio zibethinus HOM05D004799 ORTHO05D005500 1.1e-55 220.7 227 60.4
Haze_01626 Corylus avellana HOM05D004799 ORTHO05D005500 1.4e-55 220.3 231 58.4
GSVIVG01023017001 Vitis vinifera HOM05D004799 ORTHO05D005500 2.0e-54 216.5 229 58.5
Gohir.D02G232500 Gossypium hirsutum HOM05D004799 ORTHO05D005500 7.7e-54 214.5 220 60.0
Gohir.A03G210900 Gossypium hirsutum HOM05D004799 ORTHO05D005500 1.0e-53 214.2 226 57.5
Duzib248G0546 Durio zibethinus HOM05D004799 ORTHO05D005500 1.3e-53 213.8 227 58.1
Gohir.A01G177000 Gossypium hirsutum HOM05D004799 ORTHO05D005500 1.7e-53 213.4 227 59.9
Gorai.005G260300 Gossypium raimondii HOM05D004799 ORTHO05D005500 1.7e-53 213.4 220 59.5
Cfa005544 Carpinus fangiana HOM05D004799 ORTHO05D005500 2.2e-53 213.0 229 58.1
Gohir.D01G167800 Gossypium hirsutum HOM05D004799 ORTHO05D005500 3.8e-53 212.2 227 59.0
Ciclev10002345m.g Citrus clementina HOM05D004799 ORTHO05D005500 8.5e-53 211.1 232 58.6
Gorai.002G208500 Gossypium raimondii HOM05D004799 ORTHO05D005500 8.5e-53 211.1 227 59.0
Manes.07G013800 Manihot esculenta HOM05D004799 ORTHO05D005500 8.5e-53 211.1 219 59.8
Manes.10G132000 Manihot esculenta HOM05D004799 ORTHO05D005500 1.5e-52 210.3 221 58.8
CiPaw.06G148900 Carya illinoinensis HOM05D004799 ORTHO05D005500 2.5e-52 209.5 226 56.6
Dinv19352 Davidia involucrata HOM05D004799 ORTHO05D005500 2.5e-52 209.5 227 59.5
Sabra01G0161300 Salix brachista HOM05D004799 ORTHO05D005500 1.6e-51 206.8 230 56.5
Sopen01g046960 Solanum pennellii HOM05D004799 ORTHO05D005500 6.1e-51 204.9 224 56.7
PGSC0003DMG400023776 Solanum tuberosum HOM05D004799 ORTHO05D005500 6.1e-51 204.9 224 56.7
FAN13G3307 Fragaria x ananassa HOM05D004799 ORTHO05D005500 1.4e-50 203.8 222 57.7
FvH4_5g30080 Fragaria vesca HOM05D004799 ORTHO05D005500 3.0e-50 202.6 222 57.2
FAN04G2475 Fragaria x ananassa HOM05D004799 ORTHO05D005500 4.0e-50 202.2 222 56.8
RcHm_v2.0_Chr7g0224271 Rosa chinensis HOM05D004799 ORTHO05D005500 4.0e-50 202.2 231 56.7
QL02p098623 Quercus lobata HOM05D004799 ORTHO05D005500 6.7e-50 201.4 250 52.8
Glyma.08G128300 Glycine max HOM05D004799 ORTHO05D005500 8.8e-50 201.1 203 59.1
Hma1.2p1_0217F.1_g091930 Hydrangea macrophylla HOM05D004799 ORTHO05D005500 8.8e-50 201.1 230 58.3
Lalb_Chr12g0204381 Lupinus albus HOM05D004799 ORTHO05D005500 2.6e-49 199.5 234 56.8
MD08G1225100 Malus domestica HOM05D004799 ORTHO05D005500 3.3e-49 199.1 226 55.3
Potri.001G209100 Populus trichocarpa HOM05D004799 ORTHO05D005500 5.7e-49 198.4 219 56.6
Peaxi162Scf00011g00139 Petunia axillaris HOM05D004799 ORTHO05D005500 9.7e-49 197.6 212 59.4
Migut.B00668 Erythranthe guttata HOM05D004799 ORTHO05D005500 2.8e-48 196.1 230 53.5
Lsat_1_v5_gn_9_116381 Lactuca sativa HOM05D004799 ORTHO05D005500 2.8e-48 196.1 211 58.3
MD15G1418700 Malus domestica HOM05D004799 ORTHO05D005500 3.7e-48 195.7 226 55.3
FAN18G4597 Fragaria x ananassa HOM05D004799 ORTHO05D005500 6.3e-48 194.9 231 55.0
Potri.003G021500 Populus trichocarpa HOM05D004799 ORTHO05D005500 8.2e-48 194.5 208 56.7
VMungo0251G3647 Vigna mungo HOM05D004799 ORTHO05D005500 8.2e-48 194.5 204 57.4
ClCG09G016220 Citrullus lanatus HOM05D004799 ORTHO05D005500 1.4e-47 193.7 222 56.8
Lj5A248T74 Lonicera japonica HOM05D004799 ORTHO05D005500 2.4e-47 193.0 223 59.6
Lj6g0003329 Lotus japonicus HOM05D004799 ORTHO05D005500 2.4e-47 193.0 216 55.1
SGA_v2.0_scaffold110G31288 Striga asiatica HOM05D004799 ORTHO05D005500 2.4e-47 193.0 235 53.2
Cc02_g22290 Coffea canephora HOM05D004799 ORTHO05D005500 3.1e-47 192.6 219 58.0
Ah.04g149450 Amaranthus hybridus HOM05D004799 ORTHO05D005500 4.1e-47 192.2 223 53.8
MSTRG.27841 Avicennia marina HOM05D004799 ORTHO05D005500 4.1e-47 192.2 206 59.2
CiPaw.05G042800 Carya illinoinensis HOM05D004799 ORTHO05D005500 4.1e-47 192.2 267 49.1
Aqoxy6G00151 Aquilegia oxysepala HOM05D004799 ORTHO05D005500 5.3e-47 191.8 214 57.9
Sabra03G0013400 Salix brachista HOM05D004799 ORTHO05D005500 1.6e-46 190.3 215 55.3
AUR62020867 Chenopodium quinoa HOM05D004799 ORTHO05D005500 7.7e-46 188.0 221 54.3
CsaV3_7G007080 Cucumis sativus L. HOM05D004799 ORTHO05D005500 7.7e-46 188.0 223 57.0
AUR62018552 Chenopodium quinoa HOM05D004799 ORTHO05D005500 1.0e-45 187.6 218 54.6
Lalb_Chr07g0185691 Lupinus albus HOM05D004799 ORTHO05D005500 1.0e-45 187.6 222 53.6
MELO3C018586.2 Cucumis melo HOM05D004799 ORTHO05D005500 1.1e-44 184.1 224 54.5
arahy.Tifrunner.gnm1.ann1.ZS42GJ Arachis hypogaea HOM05D004799 ORTHO05D005500 1.5e-44 183.7 225 53.3
arahy.Tifrunner.gnm1.ann1.BG3XJE Arachis hypogaea HOM05D004799 ORTHO05D005500 1.9e-44 183.3 225 53.3
CAN.G1352.25 Capsicum annuum HOM05D004799 ORTHO05D005500 4.2e-44 182.2 220 55.9
EL10Ac3g07450 Beta vulgaris HOM05D004799 ORTHO05D005500 5.5e-44 181.8 209 56.5
CsaV3_5G024750 Cucumis sativus L. HOM05D004799 ORTHO05D005500 7.2e-44 181.4 211 57.3
Medtr2g007770 Medicago truncatula HOM05D004799 ORTHO05D005500 7.2e-44 181.4 217 56.2
Sed0004816 Sechium edule HOM05D004799 ORTHO05D005500 9.4e-44 181.0 226 53.5
Atru.chr6.1081 Acer truncatum HOM05D004799 ORTHO05D005500 1.2e-43 180.6 204 55.9
TAR376G0767 Trochodendron aralioides HOM05D004799 ORTHO05D005500 1.2e-43 180.6 232 51.7
HanXRQChr03g0066881 Helianthus annuus HOM05D004799 ORTHO05D005500 1.6e-43 180.3 215 53.0
Sc14g0006850 Simmondsia chinensis HOM05D004799 ORTHO05D005500 1.6e-43 180.3 216 50.9
CANSAT11G1940 Cannabis sativa HOM05D004799 ORTHO05D005500 2.7e-43 179.5 229 51.5
Dinv24262 Davidia involucrata HOM05D004799 ORTHO05D005500 2.7e-43 179.5 229 54.6
ATR0684G092 Amborella trichopoda HOM05D004799 ORTHO05D005500 4.7e-43 178.7 219 53.4
Glyma.05G170200 Glycine max HOM05D004799 ORTHO05D005500 4.7e-43 178.7 207 54.1
TPR.G2141 Trifolium pratense HOM05D004799 ORTHO05D005500 4.7e-43 178.7 214 54.7
Thecc.02G041200 Theobroma cacao HOM05D004799 ORTHO05D005500 6.1e-43 178.3 227 52.9
TAR628G0692 Trochodendron aralioides HOM05D004799 ORTHO05D005500 1.0e-42 177.6 226 50.4
Oeu012743.2 Olea europaea HOM05D004799 ORTHO05D005500 1.8e-42 176.8 237 49.8
TWI59G1038 Tripterygium wilfordii HOM05D004799 ORTHO05D005500 2.3e-42 176.4 213 53.1
Phvul.002G251000 Phaseolus vulgaris HOM05D004799 ORTHO05D005500 4.0e-42 175.6 203 53.2
DCAR_005625 Daucus carota HOM05D004799 ORTHO05D005500 5.2e-42 175.3 202 56.4
Nitab4.5_0010140g0010 Nicotiana tabacum HOM05D004799 ORTHO05D005500 8.8e-42 174.5 217 53.9
Psat1g220000 Pisum sativum HOM05D004799 ORTHO05D005500 2.0e-41 173.3 215 54.0
vmacro01776 Vaccinium macrocarpon HOM05D004799 ORTHO05D005500 3.4e-41 172.6 240 47.9
Hund19012 Selenicereus undatus HOM05D004799 ORTHO05D005500 6.3e-40 168.3 228 50.4
Oeu008877.2 Olea europaea HOM05D004799 ORTHO05D005500 1.8e-39 166.8 253 45.1
HPP92_019221 Vanilla planifolia HOM05D004799 ORTHO05D005500 9.1e-39 164.5 198 51.5
unitig_26.g9556 Utricularia gibba HOM05D004799 ORTHO05D005500 7.7e-38 161.4 212 51.4
FAN08G0327 Fragaria x ananassa HOM05D004799 ORTHO05D005500 3.8e-37 159.1 222 48.6
Lsat_1_v5_gn_7_77960 Lactuca sativa HOM05D004799 ORTHO05D005500 2.1e-35 153.3 217 51.2
Actinidia00218 Actinidia chinensis HOM05D004799 ORTHO05D005500 2.7e-35 152.9 218 49.5
Ca_00089_v3 Cicer arietinum L. HOM05D004799 ORTHO05D005500 2.7e-35 152.9 260 44.2
Ca_29928_v3 Cicer arietinum L. HOM05D004799 ORTHO05D005500 2.7e-35 152.9 260 44.2
Rhsim11G0131600 Rhododendron simsii HOM05D004799 ORTHO05D005500 2.7e-35 152.9 325 38.2
TWI23G0644 Tripterygium wilfordii HOM05D004799 ORTHO05D005500 3.6e-35 152.5 225 46.2
COL.COLO4_17895 Corchorus olitorius HOM05D004799 ORTHO05D005500 2.3e-34 149.8 226 45.6
Nitab4.5_0005539g0010 Nicotiana tabacum HOM05D004799 ORTHO05D005500 2.3e-34 149.8 217 49.8
Zm00001eb011470 Zea mays HOM05D004799 ORTHO05D005500 4.0e-34 149.1 225 46.7
Nn5g28066 Nelumbo nucifera HOM05D004799 ORTHO05D005500 1.3e-32 144.1 176 51.1
CSS0024882 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 1.7e-32 143.7 186 52.2
CSS0037217 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 1.7e-32 143.7 186 52.2
CDE02G4357 Ceratophyllum demersum HOM05D004799 ORTHO05D005500 4.9e-32 142.1 213 45.1
Os03g0262100 Oryza sativa ssp. japonica HOM05D004799 ORTHO05D005500 4.9e-32 142.1 216 48.1
Actinidia39055 Actinidia chinensis HOM05D004799 ORTHO05D005500 8.3e-32 141.4 178 51.7
SalBow6G1776 Salvia bowleyana HOM05D004799 ORTHO05D005500 5.0e-29 132.1 221 44.8
SalBow6G5744 Salvia bowleyana HOM05D004799 ORTHO05D005500 5.0e-29 132.1 221 44.8
PSO528G0257 Papaver somniferum HOM05D004799 ORTHO05D005500 1.6e-27 127.1 201 44.8
Mapoly0065s0027 Marchantia polymorpha HOM05D004799 ORTHO05D005500 3.0e-26 122.9 200 45.5
Glyma.14G170300 Glycine max HOM05D004799 ORTHO05D005500 5.2e-26 122.1 140 53.6
ECA240G2283 Erigeron canadensis HOM05D004799 ORTHO05D005500 1.5e-25 120.6 207 45.4
PSO170G0171 Papaver somniferum HOM05D004799 ORTHO05D005500 4.9e-24 115.5 213 41.3
HPP92_009361 Vanilla planifolia HOM05D004799 ORTHO05D005500 8.3e-24 114.8 206 41.3
Nn1g08619 Nelumbo nucifera HOM05D004799 ORTHO05D005500 1.1e-23 114.4 164 48.8
SEGI_10500 Sequoiadendron giganteum HOM05D004799 ORTHO05D005500 1.6e-22 110.5 93 64.5
MSTRG.16532 Avicennia marina HOM05D004799 ORTHO05D005500 2.7e-22 109.8 147 52.4
Prupe.1G562800 Prunus persica HOM05D004799 ORTHO05D005500 3.0e-21 106.3 160 48.1
MBI03_g11149_MAGBIO Magnolia biondii HOM05D004799 ORTHO05D005500 7.3e-20 101.7 313 35.1
BcaB03g13258 Brassica carinata HOM05D004799 ORTHO05D005500 1.6e-19 100.5 92 66.3
Ah.13g077920 Amaranthus hybridus HOM05D004799 ORTHO05D005500 8.0e-19 98.2 205 37.1
Lj9C308T7 Lonicera japonica HOM05D004799 ORTHO05D005500 8.9e-18 94.7 143 47.6
CBR_g22015 Chara braunii HOM05D004799 ORTHO05D005500 1.5e-17 94.0 237 35.4
AagrBONN_evm.TU.Sc2ySwM_344.2060 Anthoceros agrestis HOM05D004799 ORTHO05D005500 4.9e-16 89.0 71 63.4
A09p63310 Brassica napus HOM05D004799 ORTHO05D005500 6.4e-16 88.6 52 88.5
BraA09t41682Z Brassica rapa HOM05D004799 ORTHO05D005500 6.4e-16 88.6 52 88.5
Zm00001eb398170 Zea mays HOM05D004799 ORTHO05D005500 1.3e-13 80.9 155 40.6
Atru.chr6.1045 Acer truncatum HOM05D004799 ORTHO05D005500 5.0e-13 79.0 124 42.7
Pp3c4_27250 Physcomitrium patens HOM05D004799 ORTHO05D005500 4.4e-09 65.9 140 39.3
GSVIVG01013911001 Vitis vinifera HOM05D004799 ORTHO05D005500 9.8e-09 64.7 78 47.4
MBI03_g11127_MAGBIO Magnolia biondii HOM05D004799 ORTHO05D005500 4.9e-08 62.4 63 61.9
arahy.Tifrunner.gnm1.ann1.DUW5WJ Arachis hypogaea HOM05D004799 ORTHO05D005500 8.3e-08 61.6 81 51.9
SMO367G0479 Selaginella moellendorffii HOM05D004799 ORTHO05D005500 8.3e-08 61.6 40 70.0
CSS0012117 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 5.4e-07 58.9 42 71.4
CSS0018254 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 1.2e-06 57.8 42 71.4
Lj5A252G43 Lonicera japonica HOM05D012292 ORTHO05D012234 3.5e-06 56.2 93 41.9
SEGI_00858 Sequoiadendron giganteum HOM05D004799 ORTHO05D005500 3.5e-06 56.2 113 40.7
Ah.13g066130 Amaranthus hybridus HOM05D004799 ORTHO05D005500 7.8e-06 55.1 63 50.8
BolC8t50896H Brassica oleracea HOM05D014273 ORTHO05D041832 7.8e-06 55.1 40 65.0


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