Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 4.6e-169 597.8 301 100.0
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 2.7e-161 572.0 301 95.7
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 8.1e-158 560.5 301 94.7
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 8.1e-158 560.5 301 94.7
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 8.1e-158 560.5 301 94.7
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 9.9e-156 553.5 299 91.0
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 1.3e-155 553.1 301 93.4
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 1.1e-154 550.1 299 90.3
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 7.1e-154 547.4 299 90.3
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 1.2e-153 546.6 299 90.0
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 2.1e-153 545.8 299 90.0
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 7.3e-151 537.3 299 88.6
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 7.3e-151 537.3 299 88.6
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 9.6e-151 537.0 299 88.0
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 9.6e-151 537.0 299 89.0
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 4.7e-150 534.6 299 88.6
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 4.7e-150 534.6 299 88.6
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.1e-135 486.9 300 80.3
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 8.1e-134 480.7 298 79.5
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 1.9e-130 469.5 300 76.7
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 2.1e-129 466.1 300 76.0
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 2.3e-128 462.6 298 76.2
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 3.9e-128 461.8 298 74.2
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 3.9e-128 461.8 298 74.2
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 1.9e-127 459.5 300 72.7
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 4.3e-127 458.4 298 73.8
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 1.6e-126 456.4 300 74.0
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 6.2e-126 454.5 300 73.7
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 8.2e-126 454.1 300 72.3
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 1.4e-125 453.4 298 74.8
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 4.0e-125 451.8 300 72.3
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 5.3e-125 451.4 300 72.0
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 5.3e-125 451.4 300 72.0
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 9.0e-125 450.7 300 72.3
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 9.0e-125 450.7 300 72.3
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 9.0e-125 450.7 300 73.0
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 4.5e-124 448.4 300 72.3
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 5.8e-124 448.0 300 71.7
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 5.8e-124 448.0 298 74.2
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 1.3e-123 446.8 300 71.3
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.7e-123 446.4 303 73.9
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.2e-123 446.0 298 73.8
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.9e-123 445.7 298 73.8
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 2.9e-123 445.7 298 73.5
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 2.9e-123 445.7 300 70.7
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 3.8e-123 445.3 300 73.0
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 4.9e-123 444.9 300 72.7
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 4.9e-123 444.9 303 71.9
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 1.1e-122 443.7 298 73.5
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 1.9e-122 443.0 301 72.4
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 1.9e-122 443.0 300 71.7
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 3.2e-122 442.2 298 73.2
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 3.2e-122 442.2 303 70.0
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 4.2e-122 441.8 298 72.5
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 5.5e-122 441.4 298 71.8
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 7.1e-122 441.0 300 71.3
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 1.2e-121 440.3 300 70.3
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 1.2e-121 440.3 300 70.3
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 1.6e-121 439.9 298 71.1
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 1.0e-120 437.2 298 71.1
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 1.3e-120 436.8 300 72.3
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 1.3e-120 436.8 300 71.3
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 3.0e-120 435.6 300 72.3
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 3.9e-120 435.3 300 69.7
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 3.9e-120 435.3 300 71.7
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 5.1e-120 434.9 300 71.7
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 5.1e-120 434.9 300 70.7
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 5.1e-120 434.9 300 69.3
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 1.1e-119 433.7 300 71.0
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 7.4e-119 431.0 303 70.6
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 2.2e-118 429.5 300 70.7
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 3.7e-118 428.7 298 70.1
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 3.7e-118 428.7 295 71.5
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 1.1e-117 427.2 300 69.0
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 5.9e-116 421.4 300 69.0
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 1.7e-115 419.9 300 68.0
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 6.5e-115 417.9 300 68.3
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 8.5e-115 417.5 300 68.0
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 1.1e-114 417.2 302 68.5
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 3.2e-114 415.6 302 67.9
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 2.1e-113 412.9 303 68.0
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 2.1e-113 412.9 303 68.3
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 1.0e-112 410.6 303 67.7
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 1.4e-112 410.2 310 66.5
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 2.3e-112 409.5 302 67.9
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 2.3e-112 409.5 302 68.9
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 2.3e-112 409.5 300 66.3
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 8.8e-112 407.5 305 68.2
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 3.3e-111 405.6 293 69.3
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 2.2e-110 402.9 300 67.0
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 2.4e-109 399.4 303 66.7
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 5.0e-107 391.7 284 66.5
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 2.1e-105 386.3 303 65.0
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 4.7e-105 385.2 275 69.1
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 7.4e-103 377.9 301 62.1
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 1.2e-100 370.5 251 69.3
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 1.3e-99 367.1 248 71.8
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 3.2e-98 362.5 297 61.6
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 2.3e-96 356.3 221 74.2
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 3.3e-95 352.4 307 59.6
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 6.5e-91 338.2 299 59.2
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 2.5e-90 336.3 248 66.1
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 3.2e-90 335.9 224 72.8
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 1.6e-89 333.6 256 66.0
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 2.3e-88 329.7 235 66.0
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 3.0e-88 329.3 227 70.5
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 2.6e-87 326.2 254 63.8
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 7.5e-87 324.7 219 72.6
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.3e-86 323.9 221 71.9
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.7e-86 323.6 225 70.2
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 1.6e-81 307.0 277 56.7
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 6.1e-73 278.5 338 49.4
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 1.1e-69 267.7 300 51.3
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 3.8e-67 259.2 173 70.5
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 2.6e-55 219.9 319 40.4
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 1.6e-41 174.1 157 59.9
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 1.6e-41 174.1 343 35.0
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 8.1e-41 171.8 162 55.6
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 4.9e-38 162.5 177 49.2
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 2.8e-33 146.7 105 69.5
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 5.3e-32 142.5 300 34.3
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 2.2e-30 137.1 84 70.2
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 4.5e-23 112.8 353 31.4
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 7.6e-23 112.1 91 63.7
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 9.9e-23 111.7 88 60.2
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 6.4e-22 109.0 86 67.4
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 1.9e-21 107.5 72 68.1
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 5.1e-19 99.4 64 81.2
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 1.5e-18 97.8 134 44.0
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 5.3e-16 89.4 60 60.0
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 5.6e-10 69.3 43 72.1


User provided reference genes

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