Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 1.5e-24 115.5 66 100.0
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 1.3e-23 112.5 66 97.0
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 2.8e-23 111.3 65 95.4
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 2.8e-23 111.3 65 95.4
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 3.7e-23 110.9 65 95.4
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 4.8e-23 110.5 65 95.4
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 6.3e-23 110.2 65 93.8
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 6.3e-23 110.2 65 93.8
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 6.3e-23 110.2 65 93.8
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 6.3e-23 110.2 65 93.8
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 8.3e-23 109.8 65 93.8
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 8.3e-23 109.8 65 93.8
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 8.3e-23 109.8 65 93.8
A07p13430 Brassica napus HOM05D005631 ORTHO05D006765 1.1e-22 109.4 66 98.5
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 1.4e-22 109.0 65 93.8
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 4.1e-22 107.5 67 94.0
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 9.1e-22 106.3 66 90.9
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 1.6e-21 105.5 65 87.7
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 3.5e-21 104.4 66 90.9
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 3.5e-21 104.4 63 90.5
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 4.5e-21 104.0 65 86.2
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 4.5e-21 104.0 65 86.2
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 7.7e-21 103.2 65 87.7
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 1.7e-20 102.1 63 85.7
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 8.6e-20 99.8 65 81.5
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 5.5e-19 97.1 65 80.0
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 7.5e-16 86.7 62 72.6
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 4.9e-15 84.0 63 76.2
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 8.3e-15 83.2 59 78.0
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 8.3e-15 83.2 59 78.0
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 8.3e-15 83.2 59 78.0
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 8.3e-15 83.2 59 78.0
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 1.1e-14 82.8 61 73.8
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 1.4e-14 82.4 60 71.7
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 1.4e-14 82.4 60 71.7
BcaC02g08205 Brassica carinata HOM05D005631 ORTHO05D006765 1.8e-14 82.0 50 90.0
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 1.8e-14 82.0 59 74.6
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.4e-14 81.6 59 78.0
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 2.4e-14 81.6 61 72.1
C01p12950 Brassica napus HOM05D005631 ORTHO05D006765 4.1e-14 80.9 47 97.9
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 5.4e-14 80.5 61 70.5
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 5.4e-14 80.5 61 72.1
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 5.4e-14 80.5 61 72.1
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 5.4e-14 80.5 61 72.1
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 5.4e-14 80.5 59 72.9
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 7.0e-14 80.1 60 71.7
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 7.0e-14 80.1 57 73.7
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 9.2e-14 79.7 61 68.9
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.2e-13 79.3 59 74.6
C01p13430 Brassica napus HOM05D005631 ORTHO05D006765 1.6e-13 79.0 47 95.7
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 1.6e-13 79.0 62 71.0
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 2.0e-13 78.6 58 72.4
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 2.0e-13 78.6 60 71.7
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 2.7e-13 78.2 62 72.6
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 2.7e-13 78.2 60 75.0
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 2.7e-13 78.2 60 73.3
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 2.7e-13 78.2 60 70.0
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 3.5e-13 77.8 62 74.2
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 3.5e-13 77.8 58 74.1
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 3.5e-13 77.8 59 74.6
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 3.5e-13 77.8 59 72.9
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 3.5e-13 77.8 61 68.9
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 3.5e-13 77.8 59 71.2
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 4.5e-13 77.4 59 69.5
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 4.5e-13 77.4 59 74.6
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 4.5e-13 77.4 59 74.6
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 4.5e-13 77.4 64 68.8
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 4.5e-13 77.4 59 72.9
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 5.9e-13 77.0 61 67.2
C04p57300 Brassica napus HOM05D005631 ORTHO05D006765 5.9e-13 77.0 47 91.5
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 5.9e-13 77.0 59 71.2
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 5.9e-13 77.0 60 70.0
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 5.9e-13 77.0 61 70.5
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 7.8e-13 76.6 59 71.2
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 7.8e-13 76.6 60 73.3
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 7.8e-13 76.6 60 73.3
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 1.0e-12 76.3 60 68.3
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 1.0e-12 76.3 60 73.3
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 1.3e-12 75.9 62 69.4
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 1.7e-12 75.5 57 77.2
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 1.7e-12 75.5 60 68.3
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 1.7e-12 75.5 59 67.8
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 2.3e-12 75.1 59 69.5
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 2.3e-12 75.1 61 67.2
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 2.3e-12 75.1 59 69.5
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 2.9e-12 74.7 61 68.9
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 2.9e-12 74.7 61 68.9
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 5.0e-12 73.9 61 62.3
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 6.6e-12 73.6 62 67.7
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 6.6e-12 73.6 54 74.1
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 6.6e-12 73.6 59 66.1
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 1.1e-11 72.8 57 71.9
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 1.1e-11 72.8 57 71.9
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 1.5e-11 72.4 60 70.0
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 2.5e-11 71.6 59 71.2
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 3.3e-11 71.2 61 65.6
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 4.3e-11 70.9 55 70.9
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 7.3e-11 70.1 59 67.8
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 7.3e-11 70.1 50 76.0
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 9.5e-11 69.7 57 71.9
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 9.5e-11 69.7 61 63.9
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 9.5e-11 69.7 61 63.9
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 9.5e-11 69.7 61 63.9
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 9.5e-11 69.7 62 66.1
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 1.2e-10 69.3 60 68.3
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 1.6e-10 68.9 50 78.0
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 1.6e-10 68.9 49 77.6
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 6.1e-10 67.0 61 62.3
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 4.0e-09 64.3 62 62.9
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 1.2e-08 62.8 61 62.3
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 2.0e-08 62.0 49 73.5
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 2.6e-08 61.6 47 72.3
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 2.6e-08 61.6 47 72.3
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 5.8e-08 60.5 61 54.1
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 1.3e-07 59.3 49 67.3
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 1.7e-07 58.9 43 76.7
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 2.9e-07 58.2 44 72.7
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 2.9e-07 58.2 61 54.1
Aqoxy1G01289 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 4.9e-07 57.4 40 80.0
BcaC02g09329 Brassica carinata HOM05D005631 ORTHO05D006765 1.4e-06 55.8 64 59.4


User provided reference genes

Program Settings