Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p14990 Brassica napus HOM05D000110 ORTHO05D000024 1.1e-92 343.2 167 100.0
BraA08t33481Z Brassica rapa HOM05D000110 ORTHO05D000024 1.1e-92 343.2 167 100.0
C03p83080 Brassica napus HOM05D000110 ORTHO05D000024 1.9e-76 289.3 196 75.5
BcaC01g00683 Brassica carinata HOM05D000110 ORTHO05D000024 9.3e-71 270.4 187 73.8
BolC3t20590H Brassica oleracea HOM05D000110 ORTHO05D000024 9.3e-71 270.4 187 73.8
BcaB03g11683 Brassica carinata HOM05D000110 ORTHO05D000024 1.6e-54 216.5 222 55.0
BcaB03g11711 Brassica carinata HOM05D000110 ORTHO05D000024 7.4e-52 207.6 222 55.9
Sp7g19080 Schrenkiella parvula HOM05D000110 ORTHO05D000024 5.3e-50 201.4 220 52.7
BcaNung04706 Brassica carinata HOM05D000110 ORTHO05D000024 8.7e-45 184.1 220 50.0
BolC1t01440H Brassica oleracea HOM05D000110 ORTHO05D000024 1.1e-44 183.7 215 52.1
BcaC09g51273 Brassica carinata HOM05D000110 ORTHO05D000024 1.5e-44 183.3 215 51.6
C01p14930 Brassica napus HOM05D000110 ORTHO05D000024 1.5e-44 183.3 215 51.6
BraA01t01184Z Brassica rapa HOM05D000110 ORTHO05D000024 2.5e-44 182.6 215 51.6
BraA01t01185Z Brassica rapa HOM05D000110 ORTHO05D000024 1.6e-43 179.9 219 49.8
BcaNung04708 Brassica carinata HOM05D000110 ORTHO05D000024 2.8e-43 179.1 217 49.8
BraA01t01183Z Brassica rapa HOM05D000110 ORTHO05D000024 2.8e-43 179.1 219 50.7
Thhalv10026815m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 2.8e-43 179.1 219 48.9
A01p12390 Brassica napus HOM05D000110 ORTHO05D000024 6.3e-43 177.9 219 49.3
BcaC09g51278 Brassica carinata HOM05D000110 ORTHO05D000024 4.1e-42 175.3 219 49.3
Sp7g19130 Schrenkiella parvula HOM05D000110 ORTHO05D000024 6.9e-42 174.5 222 48.2
BolC1t01437H Brassica oleracea HOM05D000110 ORTHO05D000024 9.0e-42 174.1 219 49.3
C01p14900 Brassica napus HOM05D000110 ORTHO05D000024 1.5e-41 173.3 220 49.1
BcaC09g51270 Brassica carinata HOM05D000110 ORTHO05D000024 5.9e-41 171.4 219 46.6
C01p14950 Brassica napus HOM05D000110 ORTHO05D000024 5.9e-41 171.4 219 46.6
BolC1t01442H Brassica oleracea HOM05D000110 ORTHO05D000024 5.9e-41 171.4 219 46.6
Sp7g19110 Schrenkiella parvula HOM05D000110 ORTHO05D000024 2.5e-39 166.0 218 46.8
Thhalv10000493m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 4.2e-39 165.2 220 47.3
Thhalv10002284m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 3.0e-37 159.1 207 46.4
Thhalv10027190m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 3.9e-37 158.7 207 46.9
Thhalv10027080m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 1.1e-36 157.1 235 43.8
Thhalv10000621m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 1.5e-36 156.8 212 46.2
Thhalv10027321m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 1.5e-36 156.8 207 45.9
Sp7g19120 Schrenkiella parvula HOM05D000110 ORTHO05D000024 4.3e-36 155.2 217 44.2
BcaC09g51269 Brassica carinata HOM05D000110 ORTHO05D000024 9.7e-36 154.1 218 46.8
BcaNung04709 Brassica carinata HOM05D000110 ORTHO05D000024 9.7e-36 154.1 219 46.1
A08p15320 Brassica napus HOM05D000110 ORTHO05D000024 9.7e-36 154.1 223 45.3
C01p14960 Brassica napus HOM05D000110 ORTHO05D000024 9.7e-36 154.1 218 46.8
BraA08t33509Z Brassica rapa HOM05D000110 ORTHO05D000024 9.7e-36 154.1 223 45.3
Thhalv10027456m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 6.3e-35 151.4 197 46.2
C03p83560 Brassica napus HOM05D000110 ORTHO05D000024 3.1e-34 149.1 223 44.4
BcaC01g00719 Brassica carinata HOM05D000110 ORTHO05D000024 4.1e-34 148.7 223 44.4
A01p12400 Brassica napus HOM05D000110 ORTHO05D000024 4.1e-34 148.7 218 45.4
BolC3t20636H Brassica oleracea HOM05D000110 ORTHO05D000024 4.1e-34 148.7 223 44.4
Sp7g19090 Schrenkiella parvula HOM05D000110 ORTHO05D000024 6.9e-34 147.9 222 46.4
BcaC09g51305 Brassica carinata HOM05D000110 ORTHO05D000024 9.1e-34 147.5 197 47.2
BolC1t01443H Brassica oleracea HOM05D000110 ORTHO05D000024 9.1e-34 147.5 213 46.0
A01p12380 Brassica napus HOM05D000110 ORTHO05D096758 2.6e-33 146.0 154 56.5
BcaNung04704 Brassica carinata HOM05D000110 ORTHO05D000024 7.7e-33 144.4 216 45.4
BraA08t33511Z Brassica rapa HOM05D000110 ORTHO05D000024 1.3e-32 143.7 232 43.1
BraA01t01186Z Brassica rapa HOM05D000110 ORTHO05D000024 3.8e-32 142.1 217 43.3
Thhalv10000492m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 8.5e-32 141.0 165 49.7
A08p15350 Brassica napus HOM05D000110 ORTHO05D000024 7.2e-31 137.9 232 41.4
Thhalv10000542m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 1.2e-30 137.1 162 49.4
AL7G33050 Arabidopsis lyrata HOM05D000110 ORTHO05D000024 2.7e-30 136.0 221 42.5
Thhalv10000527m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 2.7e-30 136.0 162 48.8
BcaNung05420 Brassica carinata HOM05D000110 ORTHO05D000024 3.6e-30 135.6 209 44.5
C07p51050 Brassica napus HOM05D000110 ORTHO05D000024 7.9e-30 134.4 208 43.3
BolC7t45605H Brassica oleracea HOM05D000110 ORTHO05D000024 7.9e-30 134.4 208 43.3
Thhalv10000425m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 7.9e-30 134.4 165 48.5
BraA03t14335Z Brassica rapa HOM05D000110 ORTHO05D000024 8.8e-29 131.0 208 42.3
Thhalv10000624m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 8.8e-29 131.0 165 46.7
CARHR227590 Cardamine hirsuta HOM05D000110 ORTHO05D000024 2.6e-28 129.4 221 41.2
A03p52610 Brassica napus HOM05D000110 ORTHO05D000024 7.4e-28 127.9 205 42.0
CARHR227580 Cardamine hirsuta HOM05D000110 ORTHO05D000024 2.2e-27 126.3 221 40.3
CARHR227620 Cardamine hirsuta HOM05D000110 ORTHO05D000024 2.2e-27 126.3 220 40.0
BolC1t01412H Brassica oleracea HOM05D000110 ORTHO05D000024 3.7e-27 125.6 144 50.0
CARHR221090 Cardamine hirsuta HOM05D000110 ORTHO05D000024 1.5e-25 120.2 221 39.8
AL7G33100 Arabidopsis lyrata HOM05D000110 ORTHO05D000024 1.3e-24 117.1 224 39.3
C03p83610 Brassica napus HOM05D000110 ORTHO05D000024 1.9e-23 113.2 222 38.3
BcaC01g00722 Brassica carinata HOM05D000110 ORTHO05D000024 3.2e-23 112.5 223 38.1
BolC3t20640H Brassica oleracea HOM05D000110 ORTHO05D000024 3.2e-23 112.5 223 38.1
CARHR254770 Cardamine hirsuta HOM05D000110 ORTHO05D000024 7.2e-23 111.3 212 36.8
Thhalv10000420m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 9.4e-23 110.9 191 40.3
AT4G21080 Arabidopsis thaliana HOM05D000110 ORTHO05D000024 1.2e-22 110.5 217 40.6
BcaNung04707 Brassica carinata HOM05D000110 ORTHO05D000024 2.7e-22 109.4 124 51.6
BcaB03g11701 Brassica carinata HOM05D000110 ORTHO05D000024 3.6e-22 109.0 226 35.8
AT4G21040 Arabidopsis thaliana HOM05D000110 ORTHO05D000024 3.0e-21 105.9 198 38.4
AT4G21050 Arabidopsis thaliana HOM05D000110 ORTHO05D000024 7.7e-17 91.3 206 34.0
BolC7t43518H Brassica oleracea HOM05D000110 ORTHO05D042981 8.5e-16 87.8 101 53.5
Carub.0007s2035 Capsella rubella HOM05D000110 ORTHO05D000024 1.5e-15 87.0 208 35.6
C07p29660 Brassica napus HOM05D000110 ORTHO05D042981 2.1e-14 83.2 88 56.8
Carub.0005s0897 Capsella rubella HOM05D000110 ORTHO05D000024 2.1e-14 83.2 207 34.3
AL7G33120 Arabidopsis lyrata HOM05D000110 ORTHO05D000024 1.8e-13 80.1 167 37.1
BcaNung05418 Brassica carinata HOM05D000110 ORTHO05D024465 5.2e-13 78.6 169 39.1
CARHR227570 Cardamine hirsuta HOM05D000110 ORTHO05D000024 1.5e-12 77.0 135 43.0
AT4G21030 Arabidopsis thaliana HOM05D000110 ORTHO05D000024 1.2e-09 67.4 179 33.0
BcaB03g11703 Brassica carinata HOM05D000110 ORTHO05D000024 7.2e-07 58.2 44 59.1
BcaC01g00720 Brassica carinata HOM05D000110 ORTHO05D000024 2.1e-06 56.6 33 72.7
A08p15330 Brassica napus HOM05D000110 ORTHO05D000024 2.1e-06 56.6 33 72.7
C03p83570 Brassica napus HOM05D000110 ORTHO05D000024 2.1e-06 56.6 33 72.7
C03p83590 Brassica napus HOM05D000110 ORTHO05D000024 2.1e-06 56.6 33 72.7
BolC3t20637H Brassica oleracea HOM05D000110 ORTHO05D000024 2.1e-06 56.6 33 72.7
BraA08t33510Z Brassica rapa HOM05D000110 ORTHO05D000024 2.1e-06 56.6 33 72.7
C03p83620 Brassica napus HOM05D000110 ORTHO05D000024 3.6e-06 55.8 44 56.8
Carub.0007s2041 Capsella rubella HOM05D000110 ORTHO05D000024 3.6e-06 55.8 202 29.7


User provided reference genes

Program Settings