Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p02940 Brassica napus HOM05D002268 ORTHO05D006937 9.7e-294 1012.7 491 100.0
BraA08t32327Z Brassica rapa HOM05D002268 ORTHO05D006937 5.7e-286 986.9 493 98.2
BcaC01g01260 Brassica carinata HOM05D002268 ORTHO05D006937 4.8e-277 957.2 493 95.1
C03p89920 Brassica napus HOM05D002268 ORTHO05D006937 1.1e-276 956.1 493 94.7
BolC3t21311H Brassica oleracea HOM05D002268 ORTHO05D006937 1.1e-276 956.1 493 94.7
Sp1g37990 Schrenkiella parvula HOM05D002268 ORTHO05D006937 1.9e-257 892.1 499 88.6
BcaB02g11231 Brassica carinata HOM05D002268 ORTHO05D006937 2.3e-255 885.2 493 88.6
AT1G51310 Arabidopsis thaliana HOM05D002268 ORTHO05D006937 6.0e-251 870.5 501 86.4
Carub.0001s4017 Capsella rubella HOM05D002268 ORTHO05D006937 1.7e-250 869.0 500 86.2
AL1G59110 Arabidopsis lyrata HOM05D002268 ORTHO05D006937 3.0e-250 868.2 504 85.7
Thhalv10011432m.g Eutrema salsugineum HOM05D002268 ORTHO05D006937 1.1e-247 859.8 496 85.9
CARHR041380 Cardamine hirsuta HOM05D002268 ORTHO05D006937 1.8e-247 859.0 502 85.3
Carub.0008s0647 Capsella rubella HOM05D002268 ORTHO05D006937 3.1e-247 858.2 496 86.3
Aa31LG10G3500 Aethionema arabicum HOM05D002268 ORTHO05D006937 3.2e-236 821.6 496 81.7
A05p19700 Brassica napus HOM05D002268 ORTHO05D006937 1.0e-218 763.5 445 86.1
Ca_11284_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 1.7e-205 719.5 411 83.0
Ca_30227_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 1.7e-205 719.5 411 83.0
QL01p004788 Quercus lobata HOM05D002268 ORTHO05D006937 2.7e-203 712.2 486 72.8
COL.COLO4_24897 Corchorus olitorius HOM05D002268 ORTHO05D006937 4.6e-203 711.4 484 72.1
Gorai.009G073000 Gossypium raimondii HOM05D002268 ORTHO05D006937 9.6e-201 703.7 483 71.6
EL10Ac4g10259 Beta vulgaris HOM05D002268 ORTHO05D006937 2.8e-200 702.2 442 76.7
EL10Ac4g10275 Beta vulgaris HOM05D002268 ORTHO05D006937 2.8e-200 702.2 442 76.7
CsaV3_4G024220 Cucumis sativus L. HOM05D002268 ORTHO05D006937 4.8e-200 701.4 496 71.4
Lalb_Chr19g0138111 Lupinus albus HOM05D002268 ORTHO05D006937 4.8e-200 701.4 415 80.5
Ah.04g161910 Amaranthus hybridus HOM05D002268 ORTHO05D006937 8.2e-200 700.7 474 74.1
arahy.Tifrunner.gnm1.ann1.8VL3CN Arachis hypogaea HOM05D002268 ORTHO05D006937 1.1e-199 700.3 454 76.2
GSVIVG01025274001 Vitis vinifera HOM05D002268 ORTHO05D006937 1.1e-199 700.3 411 80.5
Lj3g0006923 Lotus japonicus HOM05D002268 ORTHO05D006937 1.4e-199 699.9 441 76.2
arahy.Tifrunner.gnm1.ann1.02894U Arachis hypogaea HOM05D002268 ORTHO05D006937 2.4e-199 699.1 483 73.1
MELO3C014598.2 Cucumis melo HOM05D002268 ORTHO05D006937 3.1e-199 698.7 466 73.8
BolC5t32017H Brassica oleracea HOM05D002268 ORTHO05D006937 4.0e-199 698.4 508 72.8
Haze_23130 Corylus avellana HOM05D002268 ORTHO05D006937 1.2e-198 696.8 443 77.0
Glyma.11G133500 Glycine max HOM05D002268 ORTHO05D006937 1.2e-198 696.8 412 80.1
Psat7g212760 Pisum sativum HOM05D002268 ORTHO05D006937 1.5e-198 696.4 464 73.5
Sc16g0011510 Simmondsia chinensis HOM05D002268 ORTHO05D006937 2.0e-198 696.0 407 80.6
Cpa.g.sc84.62 Carica papaya HOM05D002268 ORTHO05D006937 2.6e-198 695.7 432 76.6
Phvul.011G059600 Phaseolus vulgaris HOM05D002268 ORTHO05D006937 3.4e-198 695.3 451 75.6
Atru.chr3.2733 Acer truncatum HOM05D002268 ORTHO05D006937 4.5e-198 694.9 491 70.9
arahy.Tifrunner.gnm1.ann1.6XYC84 Arachis hypogaea HOM05D002268 ORTHO05D006937 1.0e-197 693.7 487 72.7
arahy.Tifrunner.gnm1.ann1.VSBS4R Arachis hypogaea HOM05D002268 ORTHO05D006937 1.0e-197 693.7 454 75.6
Duzib168G2040 Durio zibethinus HOM05D002268 ORTHO05D006937 1.3e-197 693.3 448 73.9
Prupe.5G028600 Prunus persica HOM05D002268 ORTHO05D006937 1.7e-197 693.0 450 74.7
Gohir.D05G072000 Gossypium hirsutum HOM05D002268 ORTHO05D006937 4.9e-197 691.4 483 70.2
Potri.001G259000 Populus trichocarpa HOM05D002268 ORTHO05D006937 1.9e-196 689.5 488 70.7
TWI60G0297 Tripterygium wilfordii HOM05D002268 ORTHO05D006937 1.9e-196 689.5 488 70.3
arahy.Tifrunner.gnm1.ann1.AYE0CN Arachis hypogaea HOM05D002268 ORTHO05D006937 2.5e-196 689.1 473 73.8
MD03G1176400 Malus domestica HOM05D002268 ORTHO05D006937 4.2e-196 688.3 481 71.9
Nitab4.5_0006994g0060 Nicotiana tabacum HOM05D002268 ORTHO05D006937 9.3e-196 687.2 472 72.0
AUR62019294 Chenopodium quinoa HOM05D002268 ORTHO05D006937 1.2e-195 686.8 404 80.0
VMungo1127G0743 Vigna mungo HOM05D002268 ORTHO05D006937 1.2e-195 686.8 454 74.2
CiPaw.14G119300 Carya illinoinensis HOM05D002268 ORTHO05D006937 2.1e-195 686.0 486 70.6
Sed0017829 Sechium edule HOM05D002268 ORTHO05D006937 2.7e-195 685.6 423 76.1
Rhsim01G0191500 Rhododendron simsii HOM05D002268 ORTHO05D006937 4.6e-195 684.9 453 74.6
BcaC05g27353 Brassica carinata HOM05D002268 ORTHO05D006937 7.9e-195 684.1 361 90.3
ClCG02G023280 Citrullus lanatus HOM05D002268 ORTHO05D006937 1.0e-194 683.7 510 68.0
DCAR_000723 Daucus carota HOM05D002268 ORTHO05D006937 1.0e-194 683.7 448 73.4
Sopen09g028920 Solanum pennellii HOM05D002268 ORTHO05D006937 1.8e-194 682.9 470 71.7
PGSC0003DMG400003844 Solanum tuberosum HOM05D002268 ORTHO05D006937 3.0e-194 682.2 466 71.7
Medtr4g065023 Medicago truncatula HOM05D002268 ORTHO05D006937 5.1e-194 681.4 412 79.6
Solyc09g074100.4 Solanum lycopersicum HOM05D002268 ORTHO05D006937 6.7e-194 681.0 470 71.5
Nitab4.5_0005819g0070 Nicotiana tabacum HOM05D002268 ORTHO05D006937 8.7e-194 680.6 469 72.1
vmacro19340 Vaccinium macrocarpon HOM05D002268 ORTHO05D006937 1.5e-193 679.9 408 79.2
HanXRQChr07g0197481 Helianthus annuus HOM05D002268 ORTHO05D006937 9.7e-193 677.2 488 69.7
PGR102G0832 Punica granatum HOM05D002268 ORTHO05D006937 1.3e-192 676.8 490 70.2
Hma1.2p1_0861F.1_g229700 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 1.6e-192 676.4 413 77.7
Eucgr.B03681 Eucalyptus grandis HOM05D002268 ORTHO05D006937 2.2e-192 676.0 406 79.3
Aqoxy1G00300 Aquilegia oxysepala HOM05D002268 ORTHO05D006937 2.8e-192 675.6 493 68.0
CAN.G956.10 Capsicum annuum HOM05D002268 ORTHO05D006937 2.8e-192 675.6 468 70.3
Lj2A631G13 Lonicera japonica HOM05D002268 ORTHO05D006937 2.8e-192 675.6 439 73.3
Nn7g36125 Nelumbo nucifera HOM05D002268 ORTHO05D006937 3.7e-192 675.2 487 69.0
MD11G1196700 Malus domestica HOM05D002268 ORTHO05D006937 1.4e-191 673.3 499 68.1
Cc09_g04150 Coffea canephora HOM05D002268 ORTHO05D006937 7.7e-190 667.5 421 76.0
Lsat_1_v5_gn_2_97721 Lactuca sativa HOM05D002268 ORTHO05D006937 1.0e-189 667.2 485 68.5
TPR.G35035 Trifolium pratense HOM05D002268 ORTHO05D006937 1.7e-189 666.4 420 76.7
Migut.N02313 Erythranthe guttata HOM05D002268 ORTHO05D006937 5.0e-189 664.8 406 77.1
ECA238G2081 Erigeron canadensis HOM05D002268 ORTHO05D006937 1.9e-188 662.9 411 76.4
PSO384G3396 Papaver somniferum HOM05D002268 ORTHO05D006937 1.2e-187 660.2 408 76.7
PSO339G2995 Papaver somniferum HOM05D002268 ORTHO05D006937 1.6e-187 659.8 412 76.5
C05p32860 Brassica napus HOM05D002268 ORTHO05D006937 2.3e-186 656.0 487 71.9
SalBow5G0100 Salvia bowleyana HOM05D002268 ORTHO05D006937 6.7e-186 654.4 443 70.9
HPP92_009580 Vanilla planifolia HOM05D002268 ORTHO05D006937 6.7e-186 654.4 464 68.3
RcHm_v2.0_Chr7g0231131 Rosa chinensis HOM05D002268 ORTHO05D006937 1.4e-183 646.7 472 69.5
Actinidia06337 Actinidia chinensis HOM05D002268 ORTHO05D006937 3.1e-183 645.6 442 71.9
Oeu043297.4 Olea europaea HOM05D002268 ORTHO05D006937 3.1e-183 645.6 484 66.7
AUR62000114 Chenopodium quinoa HOM05D002268 ORTHO05D006937 5.3e-183 644.8 452 69.7
FAN18G3947 Fragaria x ananassa HOM05D002268 ORTHO05D006937 5.0e-181 638.3 485 66.8
MBI04_g17077_MAGBIO Magnolia biondii HOM05D002268 ORTHO05D006937 2.5e-180 636.0 466 67.6
FvH4_5g33050 Fragaria vesca HOM05D002268 ORTHO05D006937 9.4e-180 634.0 480 67.1
ATR0605G089 Amborella trichopoda HOM05D002268 ORTHO05D006937 7.9e-179 630.9 422 71.3
Manes.06G165000 Manihot esculenta HOM05D002268 ORTHO05D006937 7.9e-179 630.9 469 69.7
Sabra16G0158600 Salix brachista HOM05D002268 ORTHO05D006937 3.0e-178 629.0 488 66.4
Zm00001eb005670 Zea mays HOM05D002268 ORTHO05D006937 5.1e-178 628.2 438 68.0
Os03g0174600 Oryza sativa ssp. japonica HOM05D002268 ORTHO05D006937 1.3e-176 623.6 485 64.3
SGA_v2.0_scaffold42G16104 Striga asiatica HOM05D002268 ORTHO05D006937 1.9e-172 609.8 460 65.0
CSS0013347 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 6.1e-171 604.7 369 77.5
Hund22033 Selenicereus undatus HOM05D002268 ORTHO05D006937 1.4e-167 593.6 632 53.6
CDE04G2511 Ceratophyllum demersum HOM05D002268 ORTHO05D006937 3.4e-161 572.4 478 62.8
Thecc.09G232700 Theobroma cacao HOM05D002268 ORTHO05D006937 2.8e-160 569.3 376 72.9
Lsat_1_v5_gn_2_132680 Lactuca sativa HOM05D002268 ORTHO05D006937 7.7e-158 561.2 395 68.9
CSS0030827 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 2.8e-144 516.2 441 60.8
Mapoly0129s0019 Marchantia polymorpha HOM05D002268 ORTHO05D006937 1.7e-136 490.3 430 57.2
SEGI_13867 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 2.9e-136 489.6 344 67.7
Pp3c15_1840 Physcomitrium patens HOM05D002268 ORTHO05D006937 4.9e-136 488.8 389 61.4
SMO331G0070 Selaginella moellendorffii HOM05D002268 ORTHO05D006937 2.7e-134 483.0 364 62.9
AagrBONN_evm.TU.Sc2ySwM_340.361 Anthoceros agrestis HOM05D002268 ORTHO05D006937 2.5e-132 476.5 445 54.8
Dinv22182 Davidia involucrata HOM05D002268 ORTHO05D006937 2.1e-131 473.4 262 83.6
Hma1.2p1_0861F.1_g229710 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 6.2e-131 471.9 273 81.7
Ciclev10006706m.g Citrus clementina HOM05D002268 ORTHO05D006937 5.1e-125 452.2 485 54.0
Glyma.12G057700 Glycine max HOM05D002268 ORTHO05D006937 8.1e-123 444.9 253 83.4
TAR369G0718 Trochodendron aralioides HOM05D002268 ORTHO05D006937 2.3e-122 443.4 261 80.5
FAN08G3580 Fragaria x ananassa HOM05D002268 ORTHO05D006937 1.0e-117 427.9 336 65.8
MCO02G416 Micromonas commoda HOM05D002268 ORTHO05D006937 4.0e-114 416.0 433 49.7
PRCOL_00001138 Prasinoderma coloniale HOM05D002268 ORTHO05D006937 2.0e-113 413.7 379 55.1
Peaxi162Scf00004g00224 Petunia axillaris HOM05D002268 ORTHO05D006937 2.2e-112 410.2 267 72.7
FAN04G1610 Fragaria x ananassa HOM05D002268 ORTHO05D006937 2.1e-110 403.7 344 61.9
AagrBONN_evm.TU.Sc2ySwM_368.606 Anthoceros agrestis HOM05D002268 ORTHO05D006937 1.3e-101 374.4 407 49.6
Cre14.g628000 Chlamydomonas reinhardtii HOM05D002268 ORTHO05D006937 3.0e-101 373.2 529 41.2
Actinidia26439 Actinidia chinensis HOM05D002268 ORTHO05D006937 4.0e-98 362.8 232 75.9
CBR_g40742 Chara braunii HOM05D002268 ORTHO05D006937 4.3e-92 342.8 402 47.3
BcaB04g17220 Brassica carinata HOM05D002268 ORTHO05D006937 7.1e-87 325.5 171 91.2
Gohir.A05G069100 Gossypium hirsutum HOM05D002268 ORTHO05D006937 4.6e-86 322.8 274 61.3
unitig_21.g20902 Utricularia gibba HOM05D002268 ORTHO05D007950 2.1e-70 270.8 205 62.9
unitig_21.g20901 Utricularia gibba HOM05D002268 ORTHO05D006937 9.7e-68 261.9 215 63.7
BcaC01g01262 Brassica carinata HOM05D002268 ORTHO05D006937 1.0e-64 251.9 281 51.6
C03p89950 Brassica napus HOM05D002268 ORTHO05D001336 8.8e-61 238.8 176 69.9
BolC3t21314H Brassica oleracea HOM05D002268 ORTHO05D006937 5.0e-56 223.0 176 66.5
BraA05t20874Z Brassica rapa HOM05D002268 ORTHO05D006937 8.0e-54 215.7 156 76.3
Hma1.2p1_0861F.1_g229720 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 5.7e-52 209.5 138 71.0
MSTRG.17590 Avicennia marina HOM05D002268 ORTHO05D006937 2.8e-51 207.2 235 53.2
CBR_g19922 Chara braunii HOM05D002268 ORTHO05D021278 2.0e-49 201.1 307 36.5
Pp3c4_6690 Physcomitrium patens HOM05D002268 ORTHO05D021278 2.7e-49 200.7 422 31.0
AagrBONN_evm.TU.Sc2ySwM_117.3752 Anthoceros agrestis HOM05D002268 ORTHO05D021278 8.5e-48 195.7 290 37.6
CSS0037797 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 2.0e-44 184.5 112 75.0
PRCOL_00001597 Prasinoderma coloniale HOM05D002268 ORTHO05D021278 4.1e-42 176.8 400 31.0
Mapoly0010s0199 Marchantia polymorpha HOM05D002268 ORTHO05D021278 2.9e-40 170.6 346 33.2
SEGI_07269 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 1.1e-39 168.7 143 60.8
MCO12G105 Micromonas commoda HOM05D002268 ORTHO05D021278 1.9e-39 167.9 346 34.7
C03p89940 Brassica napus HOM05D002268 ORTHO05D040778 1.4e-37 161.8 113 74.3
BolC3t21313H Brassica oleracea HOM05D002268 ORTHO05D040778 2.2e-35 154.5 109 74.3
Lsat_1_v5_gn_1_117501 Lactuca sativa HOM05D002268 ORTHO05D006937 4.3e-31 140.2 74 78.4
A08p02920 Brassica napus HOM05D002268 ORTHO05D099342 2.0e-25 121.3 95 65.3
MELO3C029180.2 Cucumis melo HOM05D002268 ORTHO05D168145 2.7e-25 120.9 254 35.8
SEGI_39418 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 2.6e-20 104.4 101 51.5
Nn3g21873 Nelumbo nucifera HOM05D002268 ORTHO05D006937 5.8e-20 103.2 91 61.5
Duzib150G1137 Durio zibethinus HOM05D002268 ORTHO05D006937 1.9e-15 88.2 103 56.3
C01p11650 Brassica napus HOM05D026831 ORTHO05D011195 1.4e-13 82.0 97 48.5
BolC2t12207H Brassica oleracea HOM05D002268 ORTHO05D042165 1.4e-13 82.0 97 48.5
C02p10780 Brassica napus HOM05D002268 ORTHO05D042165 1.8e-13 81.6 97 47.4
MELO3C032733.2 Cucumis melo HOM05D002268 ORTHO05D170637 5.2e-13 80.1 108 46.3
Actinidia23968 Actinidia chinensis HOM05D002268 ORTHO05D006937 3.0e-08 64.3 49 69.4
MELO3C035704.2 Cucumis melo HOM05D002268 ORTHO05D166817 6.6e-08 63.2 142 30.3
QL06p040831 Quercus lobata HOM05D002268 ORTHO05D006937 3.6e-06 57.4 28 85.7


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