Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p02410 Brassica napus HOM05D001239 ORTHO05D000925 2.7e-52 208.4 103 100.0
BraA01t00118Z Brassica rapa HOM05D001239 ORTHO05D000925 1.2e-47 193.0 103 93.2
BolC2t12499H Brassica oleracea HOM05D001239 ORTHO05D000925 1.7e-19 99.4 103 49.5
BraA04t17503Z Brassica rapa HOM05D001239 ORTHO05D000925 7.8e-12 73.9 104 39.4
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-11 72.0 103 38.8
BcaC03g13498 Brassica carinata HOM05D001239 ORTHO05D000925 5.1e-11 71.2 104 41.3
BolC7t43807H Brassica oleracea HOM05D022190 ORTHO05D018578 8.7e-11 70.5 106 36.8
BcaC04g22514 Brassica carinata HOM05D001239 ORTHO05D027739 4.3e-10 68.2 104 40.4
C06p09750 Brassica napus HOM05D001239 ORTHO05D000925 9.6e-10 67.0 103 35.0
BraA03t15429Z Brassica rapa HOM05D001239 ORTHO05D000925 1.6e-09 66.2 103 38.8
C02p54670 Brassica napus HOM05D001239 ORTHO05D000925 2.8e-09 65.5 106 36.8
AL9U10020 Arabidopsis lyrata HOM05D001239 ORTHO05D000925 3.6e-09 65.1 104 36.5
BcaC01g02035 Brassica carinata HOM05D001239 ORTHO05D000925 3.6e-09 65.1 103 41.7
BolC2t07764H Brassica oleracea HOM05D001239 ORTHO05D000925 3.6e-09 65.1 104 34.6
BcaB06g27275 Brassica carinata HOM05D001239 ORTHO05D000925 4.8e-09 64.7 98 37.8
BcaC02g06989 Brassica carinata HOM05D001239 ORTHO05D000925 6.2e-09 64.3 103 36.9
C02p15670 Brassica napus HOM05D001239 ORTHO05D000925 8.1e-09 63.9 104 37.5
BolC9t54624H Brassica oleracea HOM05D001239 ORTHO05D000925 1.1e-08 63.5 106 37.7
BcaNung02294 Brassica carinata HOM05D001239 ORTHO05D000925 1.4e-08 63.2 103 36.9
BcaC01g06146 Brassica carinata HOM05D001239 ORTHO05D000925 1.8e-08 62.8 103 32.0
BcaB07g32462 Brassica carinata HOM05D001239 ORTHO05D000925 2.4e-08 62.4 102 38.2
BraA02t08675Z Brassica rapa HOM05D001239 ORTHO05D000925 2.4e-08 62.4 107 37.4
BraA03t13628Z Brassica rapa HOM05D001239 ORTHO05D000925 2.4e-08 62.4 103 35.0
BcaC07g42703 Brassica carinata HOM05D001239 ORTHO05D000925 3.1e-08 62.0 106 33.0
BcaC08g43073 Brassica carinata HOM05D001239 ORTHO05D000925 3.1e-08 62.0 106 35.8
BcaC04g19170 Brassica carinata HOM05D001239 ORTHO05D000925 4.0e-08 61.6 103 32.0
CARHR114650 Cardamine hirsuta HOM05D001239 ORTHO05D000925 4.0e-08 61.6 103 35.0
BcaC08g45560 Brassica carinata HOM05D001239 ORTHO05D000925 5.3e-08 61.2 103 32.0
BraA07t30121Z Brassica rapa HOM05D001239 ORTHO05D000925 5.3e-08 61.2 103 35.0
BcaC02g12210 Brassica carinata HOM05D000003 ORTHO05D000925 6.9e-08 60.8 104 35.6
BolC7t45244H Brassica oleracea HOM05D000150 ORTHO05D000108 6.9e-08 60.8 103 33.0
BolC8t49469H Brassica oleracea HOM05D001239 ORTHO05D000925 6.9e-08 60.8 103 36.9
BolC5t33152H Brassica oleracea HOM05D001239 ORTHO05D000925 9.0e-08 60.5 103 35.9
BraA02t06467Z Brassica rapa HOM05D001239 ORTHO05D000925 9.0e-08 60.5 104 38.5
BraA03t14934Z Brassica rapa HOM05D010756 ORTHO05D018578 9.0e-08 60.5 104 35.6
BcaC01g05560 Brassica carinata HOM05D001239 ORTHO05D000925 1.5e-07 59.7 106 35.8
BcaC03g17630 Brassica carinata HOM05D001239 ORTHO05D000925 1.5e-07 59.7 103 34.0
BcaC08g46106 Brassica carinata HOM05D001239 ORTHO05D000925 1.5e-07 59.7 103 34.0
BcaC09g49165 Brassica carinata HOM05D000032 ORTHO05D000925 1.5e-07 59.7 104 36.5
BcaC08g47031 Brassica carinata HOM05D001239 ORTHO05D000925 2.6e-07 58.9 104 35.6
BcaC01g03544 Brassica carinata HOM05D001239 ORTHO05D000925 3.4e-07 58.5 105 36.2
BcaC01g01193 Brassica carinata HOM05D001239 ORTHO05D000925 4.5e-07 58.2 103 33.0
BolC2t09268H Brassica oleracea HOM05D001239 ORTHO05D000925 4.5e-07 58.2 98 37.8
BolC2t12256H Brassica oleracea HOM05D012699 ORTHO05D000925 4.5e-07 58.2 100 40.0
BolC3t20759H Brassica oleracea HOM05D001239 ORTHO05D000925 4.5e-07 58.2 97 35.1
BraA10t43824Z Brassica rapa HOM05D001239 ORTHO05D000925 4.5e-07 58.2 103 32.0
BraA05t23088Z Brassica rapa HOM05D001239 ORTHO05D000925 5.8e-07 57.8 108 35.2
BcaC03g15774 Brassica carinata HOM05D001239 ORTHO05D000925 7.6e-07 57.4 105 35.2
BolC4t23405H Brassica oleracea HOM05D001239 ORTHO05D000925 7.6e-07 57.4 103 30.1
BolC4t26780H Brassica oleracea HOM05D001239 ORTHO05D000925 7.6e-07 57.4 105 33.3
BraA10t43119Z Brassica rapa HOM05D001239 ORTHO05D000925 7.6e-07 57.4 100 34.0
BolC7t42027H Brassica oleracea HOM05D001239 ORTHO05D000925 9.9e-07 57.0 103 31.1
BraA07t30152Z Brassica rapa HOM05D001239 ORTHO05D000925 9.9e-07 57.0 103 30.1
C03p48310 Brassica napus HOM05D001239 ORTHO05D000925 1.7e-06 56.2 106 36.8
BolC3t21245H Brassica oleracea HOM05D001239 ORTHO05D000925 1.7e-06 56.2 104 38.5
BcaB04g17764 Brassica carinata HOM05D001239 ORTHO05D000925 2.2e-06 55.8 109 35.8
C06p07680 Brassica napus HOM05D001239 ORTHO05D000925 2.2e-06 55.8 103 37.9
BcaC06g32580 Brassica carinata HOM05D000003 ORTHO05D000925 2.9e-06 55.5 106 32.1
BolC3t19864H Brassica oleracea HOM05D001239 ORTHO05D000925 2.9e-06 55.5 103 33.0
BolC9t55949H Brassica oleracea HOM05D001239 ORTHO05D000925 2.9e-06 55.5 103 34.0
BolC3t19763H Brassica oleracea HOM05D001239 ORTHO05D000925 3.8e-06 55.1 108 33.3
CARHR055780 Cardamine hirsuta HOM05D001239 ORTHO05D000925 3.8e-06 55.1 93 36.6
BolC5t29933H Brassica oleracea HOM05D001239 ORTHO05D000925 4.9e-06 54.7 103 34.0
AL1G62100 Arabidopsis lyrata HOM05D001239 ORTHO05D000925 6.4e-06 54.3 105 37.1
BcaB08g35967 Brassica carinata HOM05D001239 ORTHO05D000925 6.4e-06 54.3 102 38.2
BolC1t02319H Brassica oleracea HOM05D000003 ORTHO05D000004 6.4e-06 54.3 104 40.4
BolC6t35566H Brassica oleracea HOM05D001239 ORTHO05D000925 6.4e-06 54.3 93 32.3
BraA07t29087Z Brassica rapa HOM05D001239 ORTHO05D043169 6.4e-06 54.3 78 38.5
BraA01t00649Z Brassica rapa HOM05D001239 ORTHO05D000925 8.4e-06 53.9 104 32.7
BraA02t06522Z Brassica rapa HOM05D001239 ORTHO05D000925 8.4e-06 53.9 50 48.0


User provided reference genes

Program Settings