Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p44320 Brassica napus HOM05D027470 ORTHO05D027834 6.3e-111 404.1 197 100.0
BraA07t31940Z Brassica rapa HOM05D027470 ORTHO05D027834 4.7e-98 361.3 186 96.8
C06p53080 Brassica napus HOM05D027470 ORTHO05D027834 1.8e-17 93.6 49 91.8
BolC6t40325H Brassica oleracea HOM05D027470 ORTHO05D027834 1.8e-17 93.6 49 91.8
Thhalv10018943m.g Eutrema salsugineum HOM05D000276 ORTHO05D003855 1.8e-09 67.0 89 47.2
Ca_03602_v3 Cicer arietinum L. HOM05D000276 ORTHO05D003855 2.0e-08 63.5 132 35.6
SGA_v2.0_scaffold239G44025 Striga asiatica HOM05D000276 ORTHO05D003855 2.0e-08 63.5 74 51.4
Aa31LG4G1800 Aethionema arabicum HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
Aa31LG7G1010 Aethionema arabicum HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
AL1G28620 Arabidopsis lyrata HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
AL2G39680 Arabidopsis lyrata HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
AT1G16470 Arabidopsis thaliana HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
AT1G79210 Arabidopsis thaliana HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
BcaB02g07205 Brassica carinata HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
BcaB02g08674 Brassica carinata HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
BcaB05g25179 Brassica carinata HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
BcaC03g15875 Brassica carinata HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
BcaC08g45369 Brassica carinata HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
BcaC08g47486 Brassica carinata HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
A02p22670 Brassica napus HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
A07p27240 Brassica napus HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
A07p44330 Brassica napus HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
C02p36280 Brassica napus HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
C06p30010 Brassica napus HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
C06p53100 Brassica napus HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
BolC2t09642H Brassica oleracea HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
BolC6t38161H Brassica oleracea HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
BolC6t40327H Brassica oleracea HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
BraA02t07268Z Brassica rapa HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
BraA07t30368Z Brassica rapa HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
BraA07t31941Z Brassica rapa HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
Carub.0001s1621 Capsella rubella HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
Carub.0002s2608 Capsella rubella HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
CARHR016940 Cardamine hirsuta HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
Thhalv10008648m.g Eutrema salsugineum HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
Sp1g14620 Schrenkiella parvula HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
Sp5g34260 Schrenkiella parvula HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
THA.LOC104808130 Tarenaya hassleriana HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
THA.LOC104812363 Tarenaya hassleriana HOM05D000276 ORTHO05D003855 2.6e-08 63.2 74 52.7
Ca_27312_v3 Cicer arietinum L. HOM05D000276 ORTHO05D003855 3.5e-08 62.8 114 37.7
Cc04_g13010 Coffea canephora HOM05D000276 ORTHO05D003855 3.5e-08 62.8 74 51.4
Cc07_g05020 Coffea canephora HOM05D000276 ORTHO05D003855 3.5e-08 62.8 74 51.4
HanXRQChr02g0037521 Helianthus annuus HOM05D000276 ORTHO05D003855 3.5e-08 62.8 74 51.4
HanXRQChr09g0245891 Helianthus annuus HOM05D000276 ORTHO05D003855 3.5e-08 62.8 74 51.4
CSS0029046 Camellia sinensis var. sinensis HOM05D000276 ORTHO05D003855 5.9e-08 62.0 70 51.4
COL.COLO4_30995 Corchorus olitorius HOM05D000276 ORTHO05D003855 7.7e-08 61.6 74 50.0
DCAR_013727 Daucus carota HOM05D000276 ORTHO05D003855 7.7e-08 61.6 74 50.0
Manes.06G175300 Manihot esculenta HOM05D000276 ORTHO05D003855 7.7e-08 61.6 74 50.0
Manes.14G010700 Manihot esculenta HOM05D000276 ORTHO05D003855 7.7e-08 61.6 74 50.0
Nitab4.5_0009223g0010 Nicotiana tabacum HOM05D000276 ORTHO05D003855 7.7e-08 61.6 83 47.0
vmacro16726 Vaccinium macrocarpon HOM05D000276 ORTHO05D003855 7.7e-08 61.6 74 50.0
MSTRG.13078 Avicennia marina HOM05D000276 ORTHO05D003855 1.0e-07 61.2 74 50.0
MSTRG.14567 Avicennia marina HOM05D000276 ORTHO05D003855 1.0e-07 61.2 74 50.0
Cpa.g.sc81.7 Carica papaya HOM05D000276 ORTHO05D003855 1.0e-07 61.2 74 50.0
Migut.H01673 Erythranthe guttata HOM05D000276 ORTHO05D003855 1.0e-07 61.2 74 50.0
MD05G1224600 Malus domestica HOM05D000276 ORTHO05D003855 1.0e-07 61.2 74 50.0
MD10G1206300 Malus domestica HOM05D000276 ORTHO05D003855 1.0e-07 61.2 74 50.0
Nitab4.5_0000822g0090 Nicotiana tabacum HOM05D000276 ORTHO05D003855 1.0e-07 61.2 74 50.0
Peaxi162Scf00241g00079 Petunia axillaris HOM05D000276 ORTHO05D003855 1.0e-07 61.2 74 50.0
Peaxi162Scf00469g00315 Petunia axillaris HOM05D000276 ORTHO05D003855 1.0e-07 61.2 74 50.0
Prupe.4G136000 Prunus persica HOM05D000276 ORTHO05D003855 1.0e-07 61.2 74 50.0
QL04p081873 Quercus lobata HOM05D000276 ORTHO05D003855 1.0e-07 61.2 74 50.0
SalBow8G5180 Salvia bowleyana HOM05D000276 ORTHO05D003855 1.0e-07 61.2 74 50.0
unitig_578.g16332 Utricularia gibba HOM05D000276 ORTHO05D003855 1.0e-07 61.2 74 50.0
unitig_8.g4751 Utricularia gibba HOM05D000276 ORTHO05D003855 1.0e-07 61.2 74 50.0
Os02g0634900 Oryza sativa ssp. japonica HOM05D000276 ORTHO05D003855 1.3e-07 60.8 74 50.0
Os03g0387100 Oryza sativa ssp. japonica HOM05D000276 ORTHO05D003855 1.3e-07 60.8 74 50.0
HPP92_021539 Vanilla planifolia HOM05D000276 ORTHO05D003855 1.3e-07 60.8 74 50.0
HPP92_021548 Vanilla planifolia HOM05D000276 ORTHO05D003855 1.3e-07 60.8 74 50.0
Zm00001eb087600 Zea mays HOM05D000276 ORTHO05D003855 1.3e-07 60.8 74 50.0
Zm00001eb185510 Zea mays HOM05D000276 ORTHO05D003855 1.3e-07 60.8 74 50.0
Zm00001eb185540 Zea mays HOM05D000276 ORTHO05D003855 1.3e-07 60.8 74 50.0
Zm00001eb248210 Zea mays HOM05D000276 ORTHO05D003855 1.3e-07 60.8 74 50.0
Zm00001eb248220 Zea mays HOM05D000276 ORTHO05D003855 1.3e-07 60.8 74 50.0
Zm00001eb248230 Zea mays HOM05D000276 ORTHO05D003855 1.3e-07 60.8 74 50.0
CDE04G0605 Ceratophyllum demersum HOM05D000276 ORTHO05D003855 1.7e-07 60.5 74 48.6
ECA236G0294 Erigeron canadensis HOM05D000276 ORTHO05D003855 1.7e-07 60.5 74 50.0
HanXRQChr11g0335541 Helianthus annuus HOM05D000276 ORTHO05D003855 1.7e-07 60.5 74 50.0
Lsat_1_v5_gn_7_110320 Lactuca sativa HOM05D000276 ORTHO05D003855 1.7e-07 60.5 74 50.0
SEGI_04968 Sequoiadendron giganteum HOM05D000276 ORTHO05D003855 1.7e-07 60.5 74 50.0
SEGI_13363 Sequoiadendron giganteum HOM05D000276 ORTHO05D003855 1.7e-07 60.5 74 50.0
Sc24g0002720 Simmondsia chinensis HOM05D000276 ORTHO05D003855 1.7e-07 60.5 74 48.6
CSS0035611 Camellia sinensis var. sinensis HOM05D000276 ORTHO05D003855 2.2e-07 60.1 74 48.6
CAN.G782.3 Capsicum annuum HOM05D000276 ORTHO05D003855 2.2e-07 60.1 74 48.6
DCAR_016836 Daucus carota HOM05D000276 ORTHO05D003855 2.2e-07 60.1 90 43.3
Dinv19593 Davidia involucrata HOM05D000276 ORTHO05D003855 2.2e-07 60.1 74 48.6
Dinv42484 Davidia involucrata HOM05D000276 ORTHO05D003855 2.2e-07 60.1 74 48.6
Migut.M01532 Erythranthe guttata HOM05D000276 ORTHO05D003855 2.2e-07 60.1 74 48.6
Lj1A1145T21 Lonicera japonica HOM05D000276 ORTHO05D003855 2.2e-07 60.1 74 48.6
Lj5A344G22 Lonicera japonica HOM05D000276 ORTHO05D003855 2.2e-07 60.1 74 48.6
Oeu027721.1 Olea europaea HOM05D001395 ORTHO05D003855 2.2e-07 60.1 74 48.6
Oeu043725.1 Olea europaea HOM05D000276 ORTHO05D003855 2.2e-07 60.1 74 48.6
Potri.012G123550 Populus trichocarpa HOM05D000276 ORTHO05D003855 2.2e-07 60.1 74 48.6
Potri.015G122400 Populus trichocarpa HOM05D000276 ORTHO05D003855 2.2e-07 60.1 74 48.6
Rhsim12G0175800 Rhododendron simsii HOM05D000276 ORTHO05D003855 2.2e-07 60.1 74 48.6
Sabra15G0138500 Salix brachista HOM05D000276 ORTHO05D003855 2.2e-07 60.1 74 48.6
Solyc10g008010.4 Solanum lycopersicum HOM05D000276 ORTHO05D003855 2.2e-07 60.1 74 48.6
Sopen10g003880 Solanum pennellii HOM05D000276 ORTHO05D003855 2.2e-07 60.1 74 48.6
PGSC0003DMG400010543 Solanum tuberosum HOM05D000276 ORTHO05D003855 2.2e-07 60.1 74 48.6
CAN.G1736.4 Capsicum annuum HOM05D000276 ORTHO05D003855 2.9e-07 59.7 74 48.6
Duzib235G1056 Durio zibethinus HOM05D000276 ORTHO05D003855 2.9e-07 59.7 74 48.6
Gohir.A05G145700 Gossypium hirsutum HOM05D000276 ORTHO05D003855 2.9e-07 59.7 74 48.6
Gohir.A10G044600 Gossypium hirsutum HOM05D000276 ORTHO05D003855 2.9e-07 59.7 74 48.6
Gohir.D05G148100 Gossypium hirsutum HOM05D000276 ORTHO05D003855 2.9e-07 59.7 74 48.6
Gohir.D10G045800 Gossypium hirsutum HOM05D000276 ORTHO05D003855 2.9e-07 59.7 74 48.6
Gorai.009G152300 Gossypium raimondii HOM05D000276 ORTHO05D003855 2.9e-07 59.7 74 48.6
Gorai.011G048700 Gossypium raimondii HOM05D000276 ORTHO05D003855 2.9e-07 59.7 74 48.6
MBI06_g27515_MAGBIO Magnolia biondii HOM05D000276 ORTHO05D003855 2.9e-07 59.7 74 48.6
Nitab4.5_0001095g0050 Nicotiana tabacum HOM05D000276 ORTHO05D003855 2.9e-07 59.7 74 48.6
Nitab4.5_0009892g0010 Nicotiana tabacum HOM05D000276 ORTHO05D003855 2.9e-07 59.7 74 48.6
PSO017G4929 Papaver somniferum HOM05D000276 ORTHO05D003855 2.9e-07 59.7 74 50.0
PSO478G2087 Papaver somniferum HOM05D000276 ORTHO05D003855 2.9e-07 59.7 74 50.0
PGR102G3129 Punica granatum HOM05D000276 ORTHO05D003855 2.9e-07 59.7 74 48.6
Solyc07g055080.3 Solanum lycopersicum HOM05D000276 ORTHO05D003855 2.9e-07 59.7 74 48.6
Sopen07g027130 Solanum pennellii HOM05D000276 ORTHO05D003855 2.9e-07 59.7 74 48.6
PGSC0003DMG400020441 Solanum tuberosum HOM05D000276 ORTHO05D003855 2.9e-07 59.7 74 48.6
Thecc.06G143200 Theobroma cacao HOM05D000276 ORTHO05D003855 2.9e-07 59.7 74 48.6
CiPaw.10G064400 Carya illinoinensis HOM05D000276 ORTHO05D003855 3.8e-07 59.3 74 48.6
CDE07G0648 Ceratophyllum demersum HOM05D000276 ORTHO05D003855 3.8e-07 59.3 74 47.3
Ciclev10005774m.g Citrus clementina HOM05D000276 ORTHO05D003855 3.8e-07 59.3 74 48.6
Glyma.01G105500 Glycine max HOM05D000276 ORTHO05D003855 3.8e-07 59.3 74 48.6
Lalb_Chr01g0015471 Lupinus albus HOM05D000276 ORTHO05D003855 3.8e-07 59.3 108 37.0
MD05G1251300 Malus domestica HOM05D000276 ORTHO05D003855 3.8e-07 59.3 74 48.6
MD10G1231800 Malus domestica HOM05D000276 ORTHO05D003855 3.8e-07 59.3 74 48.6
AagrBONN_evm.TU.Sc2ySwM_117.328 Anthoceros agrestis HOM05D000276 ORTHO05D003855 5.0e-07 58.9 76 44.7
Cfa000708 Carpinus fangiana HOM05D000276 ORTHO05D003855 5.0e-07 58.9 74 47.3
CiPaw.09G076900 Carya illinoinensis HOM05D000276 ORTHO05D003855 5.0e-07 58.9 74 47.3
Gohir.A11G253500 Gossypium hirsutum HOM05D000276 ORTHO05D003855 5.0e-07 58.9 76 46.1
Hma1.2p1_1208F.1_g267120 Hydrangea macrophylla HOM05D000276 ORTHO05D003855 5.0e-07 58.9 74 48.6
Lalb_Chr25g0284731 Lupinus albus HOM05D000276 ORTHO05D003855 5.0e-07 58.9 108 36.1
Hund12476 Selenicereus undatus HOM05D000276 ORTHO05D003855 5.0e-07 58.9 74 47.3
Hund26663 Selenicereus undatus HOM05D000276 ORTHO05D003855 5.0e-07 58.9 74 47.3
Aqoxy2G04019 Aquilegia oxysepala HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
arahy.Tifrunner.gnm1.ann1.A3R4VN Arachis hypogaea HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
arahy.Tifrunner.gnm1.ann1.J6931G Arachis hypogaea HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
arahy.Tifrunner.gnm1.ann1.N85E68 Arachis hypogaea HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
arahy.Tifrunner.gnm1.ann1.X4HZ2T Arachis hypogaea HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
CANSAT78G1531 Cannabis sativa HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
Ca_22480_v3 Cicer arietinum L. HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
Ca_30351_v3 Cicer arietinum L. HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
ClCG01G009520 Citrullus lanatus HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
MELO3C021745.2 Cucumis melo HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
Glyma.08G167600 Glycine max HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
Lj1g0005035 Lotus japonicus HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
Medtr0167s0060 Medicago truncatula HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
Phvul.005G059300 Phaseolus vulgaris HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
Psat1g013600 Pisum sativum HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
Prupe.4G112500 Prunus persica HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
Sed0005548 Sechium edule HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 8.5e-07 58.2 74 47.3
TPR.G33827 Trifolium pratense HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
TWI38G2183 Tripterygium wilfordii HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
TWI63G1717 Tripterygium wilfordii HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
TAR626G1559 Trochodendron aralioides HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
VMungo0464G0273 Vigna mungo HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
GSVIVG01012066001 Vitis vinifera HOM05D000276 ORTHO05D003855 8.5e-07 58.2 74 47.3
Nn4g24843 Nelumbo nucifera HOM05D000276 ORTHO05D003855 1.1e-06 57.8 74 47.3
Pp3c11_10390 Physcomitrium patens HOM05D000276 ORTHO05D003855 1.1e-06 57.8 76 46.1
Glyma.15G260000 Glycine max HOM05D000276 ORTHO05D003855 1.5e-06 57.4 66 51.5
Mapoly0004s0033 Marchantia polymorpha HOM05D000276 ORTHO05D003855 1.5e-06 57.4 76 44.7
CBR_g50356 Chara braunii HOM05D000276 ORTHO05D003855 1.9e-06 57.0 113 35.4
Glyma.03G073300 Glycine max HOM05D000276 ORTHO05D003855 1.9e-06 57.0 74 45.9
PSO063G5488 Papaver somniferum HOM05D000276 ORTHO05D003855 1.9e-06 57.0 74 47.3
PSO782G0714 Papaver somniferum HOM05D000276 ORTHO05D003855 1.9e-06 57.0 74 47.3
Ah.10g035160 Amaranthus hybridus HOM05D000276 ORTHO05D003855 2.5e-06 56.6 74 45.9
Eucgr.F04120 Eucalyptus grandis HOM05D000276 ORTHO05D003855 2.5e-06 56.6 74 45.9
Ah.16g105330 Amaranthus hybridus HOM05D000276 ORTHO05D003855 3.2e-06 56.2 74 44.6
EL10Ac9g22468 Beta vulgaris HOM05D000276 ORTHO05D003855 3.2e-06 56.2 74 44.6
CSS0017767 Camellia sinensis var. sinensis HOM05D000276 ORTHO05D003855 3.2e-06 56.2 74 45.9
AUR62041213 Chenopodium quinoa HOM05D000276 ORTHO05D003855 3.2e-06 56.2 74 44.6
Aqoxy3G04299 Aquilegia oxysepala HOM05D000276 ORTHO05D003855 4.2e-06 55.8 130 33.1
Lj3g0027077 Lotus japonicus HOM05D000276 ORTHO05D003855 5.5e-06 55.5 66 48.5
Aqoxy2G01703 Aquilegia oxysepala HOM05D000276 ORTHO05D003855 7.2e-06 55.1 91 40.7


User provided reference genes

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