Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p28870 Brassica napus HOM05D002183 ORTHO05D002169 2.6e-65 251.9 126 100.0
BraA07t30529Z Brassica rapa HOM05D002183 ORTHO05D002169 2.6e-65 251.9 126 100.0
BcaB05g24903 Brassica carinata HOM05D002183 ORTHO05D002169 3.9e-29 131.7 137 59.1
BcaC03g15563 Brassica carinata HOM05D002183 ORTHO05D002169 3.9e-29 131.7 137 59.1
C02p32510 Brassica napus HOM05D002183 ORTHO05D002169 3.9e-29 131.7 137 59.1
BolC2t09282H Brassica oleracea HOM05D002183 ORTHO05D002169 3.9e-29 131.7 137 59.1
BraA02t07022Z Brassica rapa HOM05D002183 ORTHO05D002169 3.9e-29 131.7 137 59.1
Thhalv10018837m.g Eutrema salsugineum HOM05D002183 ORTHO05D002169 1.1e-28 130.2 137 58.4
Carub.0002s2222 Capsella rubella HOM05D002183 ORTHO05D002169 1.5e-28 129.8 137 59.9
A02p19890 Brassica napus HOM05D002183 ORTHO05D002169 5.6e-28 127.9 135 58.5
Aa31LG4G5590 Aethionema arabicum HOM05D002183 ORTHO05D002169 9.6e-28 127.1 137 56.9
CARHR068740 Cardamine hirsuta HOM05D002183 ORTHO05D002169 1.2e-27 126.7 139 56.1
Sp5g30520 Schrenkiella parvula HOM05D002183 ORTHO05D002169 2.8e-27 125.6 137 56.9
THA.LOC104809241 Tarenaya hassleriana HOM05D002183 ORTHO05D002169 2.8e-27 125.6 137 56.9
AL2G35310 Arabidopsis lyrata HOM05D002183 ORTHO05D002169 3.6e-27 125.2 137 56.2
AT1G75380 Arabidopsis thaliana HOM05D002183 ORTHO05D002169 3.6e-27 125.2 137 56.2
Sp1g17500 Schrenkiella parvula HOM05D002183 ORTHO05D002169 9.9e-25 117.1 137 52.6
Thhalv10008268m.g Eutrema salsugineum HOM05D002183 ORTHO05D002169 1.3e-24 116.7 137 54.7
CARHR020180 Cardamine hirsuta HOM05D002183 ORTHO05D002169 4.9e-24 114.8 137 54.0
Cpa.g.sc99.33 Carica papaya HOM05D002183 ORTHO05D002169 6.4e-24 114.4 137 53.3
AL1G32380 Arabidopsis lyrata HOM05D002183 ORTHO05D002169 8.4e-24 114.0 137 53.3
BraA06t24689Z Brassica rapa HOM05D002183 ORTHO05D002169 1.1e-23 113.6 137 52.6
Manes.05G155800 Manihot esculenta HOM05D002183 ORTHO05D002169 1.4e-23 113.2 136 52.2
BcaNung07252 Brassica carinata HOM05D002183 ORTHO05D002169 1.9e-23 112.8 137 52.6
Carub.0001s1920 Capsella rubella HOM05D002183 ORTHO05D002169 1.9e-23 112.8 137 51.1
BcaB07g31969 Brassica carinata HOM05D002183 ORTHO05D002169 3.2e-23 112.1 138 50.7
AT1G19660 Arabidopsis thaliana HOM05D002183 ORTHO05D002169 4.2e-23 111.7 137 52.6
Potri.002G032500 Populus trichocarpa HOM05D002183 ORTHO05D002169 5.4e-23 111.3 136 52.2
Potri.005G230600 Populus trichocarpa HOM05D002183 ORTHO05D002169 1.2e-22 110.2 136 51.5
Manes.18G020500 Manihot esculenta HOM05D002183 ORTHO05D002169 2.7e-22 109.0 133 50.4
TWI12G1188 Tripterygium wilfordii HOM05D002183 ORTHO05D002169 4.6e-22 108.2 137 50.4
TWI56G1271 Tripterygium wilfordii HOM05D002183 ORTHO05D002169 1.3e-21 106.7 137 51.1
Ciclev10001796m.g Citrus clementina HOM05D002183 ORTHO05D002169 2.3e-21 105.9 137 49.6
Atru.chr13.419 Acer truncatum HOM05D002183 ORTHO05D002169 5.1e-21 104.8 137 49.6
CiPaw.07G158000 Carya illinoinensis HOM05D002183 ORTHO05D002169 2.8e-19 99.0 132 48.5
Gohir.A06G008000 Gossypium hirsutum HOM05D002183 ORTHO05D002169 3.6e-19 98.6 140 46.4
TPR.G12441 Trifolium pratense HOM05D002183 ORTHO05D002169 3.6e-19 98.6 137 48.9
PGR083G2726 Punica granatum HOM05D002183 ORTHO05D002169 6.2e-19 97.8 131 48.9
Gohir.D06G003700 Gossypium hirsutum HOM05D002183 ORTHO05D002169 1.4e-18 96.7 140 47.9
Duzib041G0698 Durio zibethinus HOM05D002183 ORTHO05D002169 2.4e-18 95.9 140 47.1
Medtr1g022485 Medicago truncatula HOM05D002183 ORTHO05D002169 2.4e-18 95.9 134 45.5
Phvul.001G012000 Phaseolus vulgaris HOM05D002183 ORTHO05D002169 3.1e-18 95.5 132 46.2
arahy.Tifrunner.gnm1.ann1.FN6QZN Arachis hypogaea HOM05D002183 ORTHO05D002169 6.9e-18 94.4 133 48.1
CANSAT25G2082 Cannabis sativa HOM05D002183 ORTHO05D002169 6.9e-18 94.4 132 47.0
MELO3C003799.2 Cucumis melo HOM05D002183 ORTHO05D002169 6.9e-18 94.4 132 47.7
Duzib116G0119 Durio zibethinus HOM05D002183 ORTHO05D002169 9.0e-18 94.0 137 43.8
Sed0007935 Sechium edule HOM05D002183 ORTHO05D002169 9.0e-18 94.0 133 44.4
Medtr3g112160 Medicago truncatula HOM05D002183 ORTHO05D002169 1.2e-17 93.6 137 47.4
arahy.Tifrunner.gnm1.ann1.QE05K9 Arachis hypogaea HOM05D002183 ORTHO05D002169 1.5e-17 93.2 133 48.1
Psat5g016240 Pisum sativum HOM05D002183 ORTHO05D002169 1.5e-17 93.2 128 48.4
Lj5g0023942 Lotus japonicus HOM05D002183 ORTHO05D002169 2.0e-17 92.8 132 46.2
MD08G1026400 Malus domestica HOM05D002183 ORTHO05D002169 2.0e-17 92.8 132 44.7
CsaV3_3G045430 Cucumis sativus L. HOM05D002183 ORTHO05D002169 2.6e-17 92.4 132 45.5
Gohir.A03G079700 Gossypium hirsutum HOM05D002183 ORTHO05D002169 2.6e-17 92.4 140 46.4
Gohir.D02G095600 Gossypium hirsutum HOM05D002183 ORTHO05D002169 2.6e-17 92.4 140 46.4
Gohir.D05G194800 Gossypium hirsutum HOM05D002183 ORTHO05D002169 2.6e-17 92.4 137 44.5
Gorai.005G109300 Gossypium raimondii HOM05D002183 ORTHO05D002169 2.6e-17 92.4 140 46.4
Lj1g0001454 Lotus japonicus HOM05D002183 ORTHO05D002169 2.6e-17 92.4 137 46.7
Psat6g009520 Pisum sativum HOM05D002183 ORTHO05D002169 2.6e-17 92.4 134 46.3
CSS0024303 Camellia sinensis var. sinensis HOM05D002183 ORTHO05D002169 3.4e-17 92.0 131 45.8
Thecc.08G032300 Theobroma cacao HOM05D002183 ORTHO05D002169 3.4e-17 92.0 140 46.4
GSVIVG01009760001 Vitis vinifera HOM05D002183 ORTHO05D002169 3.4e-17 92.0 131 46.6
C05p18100 Brassica napus HOM05D000394 ORTHO05D000299 4.4e-17 91.7 111 52.3
Prupe.1G375100 Prunus persica HOM05D002183 ORTHO05D002169 4.4e-17 91.7 132 46.2
Sc15g0007100 Simmondsia chinensis HOM05D002183 ORTHO05D002169 4.4e-17 91.7 131 45.8
FvH4_2g39410 Fragaria vesca HOM05D002183 ORTHO05D002169 5.8e-17 91.3 132 47.0
FAN20G2224 Fragaria x ananassa HOM05D002183 ORTHO05D002169 5.8e-17 91.3 132 47.0
Aa31LG7G4260 Aethionema arabicum HOM05D000394 ORTHO05D000299 7.6e-17 90.9 111 52.3
ECA247G3675 Erigeron canadensis HOM05D002183 ORTHO05D002169 9.9e-17 90.5 130 43.1
QL02p009441 Quercus lobata HOM05D002183 ORTHO05D002169 9.9e-17 90.5 141 44.0
TPR.G14413 Trifolium pratense HOM05D002183 ORTHO05D002169 9.9e-17 90.5 134 43.3
ECA246G2632 Erigeron canadensis HOM05D002183 ORTHO05D002169 1.3e-16 90.1 129 41.9
A06p15790 Brassica napus HOM05D000394 ORTHO05D000299 2.2e-16 89.4 111 51.4
BolC5t30518H Brassica oleracea HOM05D000394 ORTHO05D000299 2.2e-16 89.4 111 51.4
Lj4A789G52 Lonicera japonica HOM05D002183 ORTHO05D002169 2.2e-16 89.4 131 44.3
SGA_v2.0_scaffold201G41380 Striga asiatica HOM05D002183 ORTHO05D002169 2.2e-16 89.4 105 49.5
Cc10_g02510 Coffea canephora HOM05D002183 ORTHO05D002169 4.9e-16 88.2 134 45.5
RcHm_v2.0_Chr6g0301571 Rosa chinensis HOM05D002183 ORTHO05D002169 4.9e-16 88.2 132 45.5
VMungo0647G0416 Vigna mungo HOM05D002183 ORTHO05D002169 4.9e-16 88.2 129 48.1
CSS0012198 Camellia sinensis var. sinensis HOM05D002183 ORTHO05D002169 6.4e-16 87.8 131 44.3
DCAR_017526 Daucus carota HOM05D002183 ORTHO05D002169 8.4e-16 87.4 130 41.5
Lalb_Chr11g0062241 Lupinus albus HOM05D002183 ORTHO05D002169 8.4e-16 87.4 129 46.5
unitig_37.g13004 Utricularia gibba HOM05D000186 ORTHO05D001124 8.4e-16 87.4 130 44.6
DCAR_022462 Daucus carota HOM05D002183 ORTHO05D002169 1.1e-15 87.0 142 41.5
Lalb_Chr08g0245941 Lupinus albus HOM05D002183 ORTHO05D002169 2.4e-15 85.9 134 44.0
BcaB03g12904 Brassica carinata HOM05D002183 ORTHO05D002169 3.2e-15 85.5 109 47.7
Migut.E00170 Erythranthe guttata HOM05D002183 ORTHO05D002169 3.2e-15 85.5 140 40.7
Oeu047765.2 Olea europaea HOM05D002183 ORTHO05D002169 3.2e-15 85.5 139 43.9
Dinv39450 Davidia involucrata HOM05D002183 ORTHO05D002169 4.2e-15 85.1 130 43.8
Glyma.14G071700 Glycine max HOM05D002183 ORTHO05D002169 4.2e-15 85.1 132 45.5
Sabra02G0026400 Salix brachista HOM05D002183 ORTHO05D002169 5.4e-15 84.7 110 50.0
unitig_8.g4929 Utricularia gibba HOM05D002183 ORTHO05D002169 7.1e-15 84.3 139 41.0
ATR0585G127 Amborella trichopoda HOM05D002183 ORTHO05D002169 9.3e-15 84.0 128 43.8
MSTRG.22311 Avicennia marina HOM05D002183 ORTHO05D002169 9.3e-15 84.0 129 42.6
MBI16_g07879_MAGBIO Magnolia biondii HOM05D002183 ORTHO05D002169 9.3e-15 84.0 129 44.2
PSO541G0160 Papaver somniferum HOM05D002183 ORTHO05D002169 1.2e-14 83.6 128 42.2
MSTRG.1257 Avicennia marina HOM05D002183 ORTHO05D002169 2.1e-14 82.8 131 42.0
Sabra05G0178100 Salix brachista HOM05D002183 ORTHO05D002169 3.5e-14 82.0 110 48.2
HanXRQChr05g0151711 Helianthus annuus HOM05D002183 ORTHO05D002169 4.6e-14 81.6 110 47.3
Rhsim06G0029100 Rhododendron simsii HOM05D002183 ORTHO05D002169 4.6e-14 81.6 128 43.8
unitig_578.g16077 Utricularia gibba HOM05D002183 ORTHO05D002169 6.0e-14 81.3 130 39.2
MSTRG.25193 Avicennia marina HOM05D002183 ORTHO05D002169 7.9e-14 80.9 130 43.1
Lalb_Chr22g0354611 Lupinus albus HOM05D002183 ORTHO05D002169 7.9e-14 80.9 128 43.0
Migut.C00759 Erythranthe guttata HOM05D002183 ORTHO05D002169 1.0e-13 80.5 130 42.3
Oeu002821.2 Olea europaea HOM05D002183 ORTHO05D002169 1.0e-13 80.5 139 42.4
Actinidia22519 Actinidia chinensis HOM05D002183 ORTHO05D002169 1.3e-13 80.1 111 47.7
EL10Ac1g00630 Beta vulgaris HOM05D002183 ORTHO05D002169 1.3e-13 80.1 110 46.4
MD15G1023200 Malus domestica HOM05D002183 ORTHO05D002169 1.7e-13 79.7 111 47.7
Hund16452 Selenicereus undatus HOM05D002183 ORTHO05D002169 1.7e-13 79.7 127 40.9
vmacro21676 Vaccinium macrocarpon HOM05D002183 ORTHO05D002169 1.7e-13 79.7 131 41.2
COL.COLO4_26255 Corchorus olitorius HOM05D002183 ORTHO05D002169 2.3e-13 79.3 119 46.2
Lalb_Chr14g0369461 Lupinus albus HOM05D002183 ORTHO05D002169 2.3e-13 79.3 127 44.9
Gorai.010G008300 Gossypium raimondii HOM05D002183 ORTHO05D002169 3.0e-13 79.0 114 44.7
HanXRQChr04g0104621 Helianthus annuus HOM05D002183 ORTHO05D002169 3.0e-13 79.0 111 43.2
Gorai.009G199700 Gossypium raimondii HOM05D002183 ORTHO05D002169 5.1e-13 78.2 111 44.1
Lsat_1_v5_gn_5_27120 Lactuca sativa HOM05D002183 ORTHO05D002169 5.1e-13 78.2 110 44.5
SGA_v2.0_scaffold11G05839 Striga asiatica HOM05D002183 ORTHO05D002169 1.1e-12 77.0 139 40.3
CiPaw.08G060000 Carya illinoinensis HOM05D002183 ORTHO05D002169 1.9e-12 76.3 106 42.5
Eucgr.F01596 Eucalyptus grandis HOM05D002183 ORTHO05D002169 1.9e-12 76.3 111 44.1
FAN15G1175 Fragaria x ananassa HOM05D002183 ORTHO05D002169 1.9e-12 76.3 111 45.9
Cfa013865 Carpinus fangiana HOM05D002765 ORTHO05D003083 2.5e-12 75.9 133 39.8
TAR625G0195 Trochodendron aralioides HOM05D002183 ORTHO05D002169 2.5e-12 75.9 111 45.9
TAR628G0384 Trochodendron aralioides HOM05D002183 ORTHO05D002169 2.5e-12 75.9 111 46.8
Sopen04g034290 Solanum pennellii HOM05D002183 ORTHO05D002169 3.3e-12 75.5 139 41.0
PGSC0003DMG402003745 Solanum tuberosum HOM05D002183 ORTHO05D002169 3.3e-12 75.5 139 41.0
CAN.G710.10 Capsicum annuum HOM05D002183 ORTHO05D002169 4.3e-12 75.1 139 39.6
SalBow8G2835 Salvia bowleyana HOM05D002183 ORTHO05D002169 4.3e-12 75.1 138 39.9
SalBow8G5417 Salvia bowleyana HOM05D002183 ORTHO05D002169 4.3e-12 75.1 138 39.9
Nn1g04893 Nelumbo nucifera HOM05D002183 ORTHO05D002169 5.6e-12 74.7 111 44.1
Aqoxy5G01566 Aquilegia oxysepala HOM05D002183 ORTHO05D002169 7.4e-12 74.3 120 43.3
HanXRQChr08g0209851 Helianthus annuus HOM05D002183 ORTHO05D002169 1.6e-11 73.2 112 41.1
Sc16g0002520 Simmondsia chinensis HOM05D002183 ORTHO05D002169 1.6e-11 73.2 136 39.0
Sed0028215 Sechium edule HOM05D002183 ORTHO05D002169 3.6e-11 72.0 47 80.9
Ah.05g176900 Amaranthus hybridus HOM05D002183 ORTHO05D002169 4.8e-11 71.6 104 42.3
Zm00001eb028060 Zea mays HOM05D002183 ORTHO05D002169 4.8e-11 71.6 129 40.3
AUR62014491 Chenopodium quinoa HOM05D002183 ORTHO05D002169 6.2e-11 71.2 105 40.0
Oeu052973.1 Olea europaea HOM05D002183 ORTHO05D002169 6.2e-11 71.2 119 39.5
Os01g0702000 Oryza sativa ssp. japonica HOM05D002183 ORTHO05D002169 8.1e-11 70.9 136 36.0
CAN.G847.4 Capsicum annuum HOM05D002183 ORTHO05D002169 1.1e-10 70.5 131 39.7
Os08g0357000 Oryza sativa ssp. japonica HOM05D002183 ORTHO05D002169 1.4e-10 70.1 129 38.0
SalBow7G3426 Salvia bowleyana HOM05D002183 ORTHO05D002169 1.4e-10 70.1 114 43.0
Zm00001eb135130 Zea mays HOM05D002183 ORTHO05D002169 1.8e-10 69.7 128 37.5
Zm00001eb176850 Zea mays HOM05D002183 ORTHO05D002169 4.0e-10 68.6 134 38.8
Duzib093G1417 Durio zibethinus HOM05D000394 ORTHO05D000299 5.3e-10 68.2 109 43.1
Hund17180 Selenicereus undatus HOM05D002183 ORTHO05D002169 5.3e-10 68.2 137 35.8
arahy.Tifrunner.gnm1.ann1.3FQ6RN Arachis hypogaea HOM05D002183 ORTHO05D002169 6.9e-10 67.8 112 39.3
arahy.Tifrunner.gnm1.ann1.C9WYXW Arachis hypogaea HOM05D002183 ORTHO05D002169 6.9e-10 67.8 112 39.3
CDE11G0795 Ceratophyllum demersum HOM05D002183 ORTHO05D002169 6.9e-10 67.8 111 43.2
Nitab4.5_0003265g0010 Nicotiana tabacum HOM05D002183 ORTHO05D002169 6.9e-10 67.8 111 43.2
Sopen12g031100 Solanum pennellii HOM05D002183 ORTHO05D002169 1.5e-09 66.6 139 36.7
Aqoxy6G01176 Aquilegia oxysepala HOM05D002183 ORTHO05D002169 3.4e-09 65.5 47 76.6
Pp3c20_10270 Physcomitrium patens HOM05D002183 ORTHO05D002169 3.4e-09 65.5 137 32.8
SMO365G0031 Selaginella moellendorffii HOM05D002183 ORTHO05D002169 3.4e-09 65.5 124 37.1
Peaxi162Scf00140g00710 Petunia axillaris HOM05D002183 ORTHO05D002169 4.5e-09 65.1 133 40.6
Nitab4.5_0005229g0030 Nicotiana tabacum HOM05D002183 ORTHO05D002169 7.6e-09 64.3 119 41.2
Solyc04g080700.4 Solanum lycopersicum HOM05D002183 ORTHO05D002169 7.6e-09 64.3 119 41.2
TAR376G0858 Trochodendron aralioides HOM05D002183 ORTHO05D002169 7.6e-09 64.3 53 67.9
Nitab4.5_0015312g0010 Nicotiana tabacum HOM05D002183 ORTHO05D002169 9.9e-09 63.9 111 40.5
SGA_v2.0_scaffold162G37880 Striga asiatica HOM05D002183 ORTHO05D002169 2.2e-08 62.8 110 37.3
Nitab4.5_0001091g0010 Nicotiana tabacum HOM05D002183 ORTHO05D002169 2.9e-08 62.4 111 39.6
Pp3c8_20150 Physcomitrium patens HOM05D002183 ORTHO05D002169 3.8e-08 62.0 131 35.1
HPP92_003103 Vanilla planifolia HOM05D002183 ORTHO05D002169 4.9e-08 61.6 47 66.0
Haze_22542 Corylus avellana HOM05D002183 ORTHO05D002169 6.4e-08 61.2 98 38.8
Mapoly0014s0050 Marchantia polymorpha HOM05D002183 ORTHO05D002169 6.4e-08 61.2 131 34.4
Ah.02g124970 Amaranthus hybridus HOM05D002183 ORTHO05D002169 8.4e-08 60.8 109 39.4
PGSC0003DMG400015464 Solanum tuberosum HOM05D002183 ORTHO05D002169 8.4e-08 60.8 119 39.5
AUR62004098 Chenopodium quinoa HOM05D002183 ORTHO05D002169 1.4e-07 60.1 109 39.4
AUR62007611 Chenopodium quinoa HOM05D002183 ORTHO05D002169 1.4e-07 60.1 109 39.4
EL10As8g23901 Beta vulgaris HOM05D002183 ORTHO05D002169 2.4e-07 59.3 112 38.4
Peaxi162Scf00064g00535 Petunia axillaris HOM05D002183 ORTHO05D002169 4.2e-07 58.5 47 66.0
CDE02G4297 Ceratophyllum demersum HOM05D002183 ORTHO05D002169 7.1e-07 57.8 47 66.0
Lsat_1_v5_gn_1_16840 Lactuca sativa HOM05D000394 ORTHO05D000299 7.1e-07 57.8 86 39.5
Eucgr.I02297 Eucalyptus grandis HOM05D002183 ORTHO05D002169 9.3e-07 57.4 122 33.6
Pp3c17_19060 Physcomitrium patens HOM05D002183 ORTHO05D002169 1.2e-06 57.0 128 35.2
Hund26902 Selenicereus undatus HOM05D002183 ORTHO05D002169 2.1e-06 56.2 92 40.2
Pp3c1_28640 Physcomitrium patens HOM05D002183 ORTHO05D002169 2.7e-06 55.8 128 35.2
Nn5g29694 Nelumbo nucifera HOM05D002183 ORTHO05D002169 3.5e-06 55.5 47 66.0
Pp3c2_9900 Physcomitrium patens HOM05D002183 ORTHO05D002169 3.5e-06 55.5 127 35.4
CAN.G710.8 Capsicum annuum HOM05D002183 ORTHO05D002169 4.6e-06 55.1 54 59.3
Oeu007027.1 Olea europaea HOM05D002183 ORTHO05D002169 7.9e-06 54.3 53 50.9
Pp3c24_19200 Physcomitrium patens HOM05D002183 ORTHO05D002169 7.9e-06 54.3 47 57.4


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