Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p21460 Brassica napus HOM05D001415 ORTHO05D001075 4.4e-28 127.1 58 100.0
BraA07t29833Z Brassica rapa HOM05D001415 ORTHO05D001075 4.4e-28 127.1 58 100.0
BcaB01g00298 Brassica carinata HOM05D001415 ORTHO05D001075 1.2e-17 92.4 58 72.4
BcaB01g00299 Brassica carinata HOM05D001415 ORTHO05D001075 1.2e-17 92.4 58 72.4
BcaC07g39683 Brassica carinata HOM05D001415 ORTHO05D001075 2.0e-17 91.7 56 73.2
C08p28460 Brassica napus HOM05D001415 ORTHO05D001075 2.0e-17 91.7 56 73.2
BolC8t50454H Brassica oleracea HOM05D001415 ORTHO05D001075 2.0e-17 91.7 56 73.2
A09p46240 Brassica napus HOM05D001415 ORTHO05D001075 7.8e-17 89.7 56 71.4
BraA09t40087Z Brassica rapa HOM05D001415 ORTHO05D001075 7.8e-17 89.7 56 71.4
AL5G34120 Arabidopsis lyrata HOM05D001415 ORTHO05D001075 8.6e-16 86.3 58 65.5
AT3G53232 Arabidopsis thaliana HOM05D001415 ORTHO05D001075 3.3e-15 84.3 58 62.1
CARHR163060 Cardamine hirsuta HOM05D001415 ORTHO05D001075 1.1e-13 79.3 52 65.4
Potri.006G125600 Populus trichocarpa HOM05D001415 ORTHO05D001075 8.3e-11 69.7 49 61.2
Carub.0005s1977 Capsella rubella HOM05D001415 ORTHO05D001075 1.1e-10 69.3 48 60.4
BcaC01g05622 Brassica carinata HOM05D001415 ORTHO05D001075 1.9e-10 68.6 50 60.0
A03p20360 Brassica napus HOM05D001415 ORTHO05D001075 1.9e-10 68.6 50 60.0
C03p23940 Brassica napus HOM05D001415 ORTHO05D001075 1.9e-10 68.6 50 60.0
Carub.0004s1883 Capsella rubella HOM05D001415 ORTHO05D001075 1.9e-10 68.6 46 54.3
BcaB06g28964 Brassica carinata HOM05D001415 ORTHO05D001075 2.4e-10 68.2 50 60.0
BraA03t11281Z Brassica rapa HOM05D001415 ORTHO05D001075 2.4e-10 68.2 50 60.0
Manes.08G009400 Manihot esculenta HOM05D001415 ORTHO05D001075 3.2e-10 67.8 49 55.1
AL4G33230 Arabidopsis lyrata HOM05D001415 ORTHO05D001075 4.1e-10 67.4 44 59.1
AT2G36985 Arabidopsis thaliana HOM05D001415 ORTHO05D001075 4.1e-10 67.4 45 57.8
A05p08830 Brassica napus HOM05D001415 ORTHO05D001075 4.1e-10 67.4 50 58.0
BraA05t19850Z Brassica rapa HOM05D001415 ORTHO05D001075 4.1e-10 67.4 50 58.0
Manes.09G067380 Manihot esculenta HOM05D001415 ORTHO05D001075 4.1e-10 67.4 41 61.0
BolC3t14783H Brassica oleracea HOM05D001415 ORTHO05D001075 5.4e-10 67.0 50 58.0
CiPaw.10G130800 Carya illinoinensis HOM05D001415 ORTHO05D001075 5.4e-10 67.0 54 59.3
Aa31LG5G22210 Aethionema arabicum HOM05D001415 ORTHO05D001075 9.2e-10 66.2 50 54.0
BcaB01g03804 Brassica carinata HOM05D001415 ORTHO05D001075 9.2e-10 66.2 50 58.0
BolC4t28054H Brassica oleracea HOM05D001415 ORTHO05D001075 1.2e-09 65.9 50 60.0
COL.COLO4_26977 Corchorus olitorius HOM05D001415 ORTHO05D001075 1.6e-09 65.5 44 61.4
BcaB02g09311 Brassica carinata HOM05D001415 ORTHO05D001075 2.1e-09 65.1 50 58.0
BcaC02g07562 Brassica carinata HOM05D001415 ORTHO05D001075 2.7e-09 64.7 50 58.0
BcaC02g07563 Brassica carinata HOM05D001415 ORTHO05D001075 2.7e-09 64.7 50 58.0
BcaC02g07564 Brassica carinata HOM05D001415 ORTHO05D001075 2.7e-09 64.7 50 58.0
CANSAT80G1980 Cannabis sativa HOM05D001415 ORTHO05D001075 2.7e-09 64.7 38 68.4
Gohir.D09G143600 Gossypium hirsutum HOM05D001415 ORTHO05D001075 2.7e-09 64.7 38 68.4
Gorai.006G164900 Gossypium raimondii HOM05D001415 ORTHO05D001075 2.7e-09 64.7 38 68.4
BcaC02g11823 Brassica carinata HOM05D001415 ORTHO05D001075 3.5e-09 64.3 51 52.9
BcaC02g11824 Brassica carinata HOM05D001415 ORTHO05D001075 3.5e-09 64.3 51 52.9
C04p10960 Brassica napus HOM05D001415 ORTHO05D001075 3.5e-09 64.3 51 52.9
C04p65620 Brassica napus HOM05D001415 ORTHO05D001075 3.5e-09 64.3 50 56.0
BolC4t22690H Brassica oleracea HOM05D001415 ORTHO05D001075 3.5e-09 64.3 51 52.9
RcHm_v2.0_Chr3g0470051 Rosa chinensis HOM05D001415 ORTHO05D001075 3.5e-09 64.3 42 61.9
A04p28260 Brassica napus HOM05D001415 ORTHO05D001075 6.0e-09 63.5 50 56.0
Duzib128G1683 Durio zibethinus HOM05D001415 ORTHO05D001075 6.0e-09 63.5 43 60.5
FAN14G2263 Fragaria x ananassa HOM05D001415 ORTHO05D001075 6.0e-09 63.5 41 63.4
Gohir.A04G072400 Gossypium hirsutum HOM05D001415 ORTHO05D001075 7.8e-09 63.2 35 71.4
Gohir.D04G111000 Gossypium hirsutum HOM05D001415 ORTHO05D001075 7.8e-09 63.2 35 71.4
Gorai.009G415100 Gossypium raimondii HOM05D001415 ORTHO05D001075 7.8e-09 63.2 35 71.4
Lalb_Chr20g0112631 Lupinus albus HOM05D001415 ORTHO05D001075 1.0e-08 62.8 55 49.1
VMungo0720G3116 Vigna mungo HOM05D001415 ORTHO05D001075 1.0e-08 62.8 38 63.2
FAN05G3971 Fragaria x ananassa HOM05D001415 ORTHO05D001075 1.7e-08 62.0 40 62.5
Lalb_Chr25g0289021 Lupinus albus HOM05D001415 ORTHO05D001075 1.7e-08 62.0 39 61.5
Gohir.A09G147800 Gossypium hirsutum HOM05D001415 ORTHO05D001075 2.3e-08 61.6 38 65.8
Lj1g0014030 Lotus japonicus HOM05D001415 ORTHO05D001075 2.3e-08 61.6 57 49.1
Lalb_Chr01g0018721 Lupinus albus HOM05D001415 ORTHO05D001075 2.3e-08 61.6 38 63.2
Medtr7g101850 Medicago truncatula HOM05D001415 ORTHO05D001075 2.3e-08 61.6 38 63.2
Phvul.001G178700 Phaseolus vulgaris HOM05D001415 ORTHO05D001075 2.3e-08 61.6 38 63.2
Glyma.03G182700 Glycine max HOM05D001415 ORTHO05D001075 3.0e-08 61.2 38 63.2
Glyma.19G183200 Glycine max HOM05D001415 ORTHO05D001075 3.0e-08 61.2 38 63.2
Psat3g042400 Pisum sativum HOM05D001415 ORTHO05D001075 3.0e-08 61.2 38 63.2
TPR.G9363 Trifolium pratense HOM05D001415 ORTHO05D001075 3.0e-08 61.2 38 63.2
Glyma.10G057200 Glycine max HOM05D001415 ORTHO05D001075 3.9e-08 60.8 38 57.9
Gohir.A11G324200 Gossypium hirsutum HOM05D001415 ORTHO05D001075 3.9e-08 60.8 45 55.6
BcaC02g07565 Brassica carinata HOM05D001415 ORTHO05D001075 6.6e-08 60.1 50 56.0
THA.LOC109116388 Tarenaya hassleriana HOM05D001415 ORTHO05D001075 1.5e-07 58.9 48 52.1
TWI74G0876 Tripterygium wilfordii HOM05D001415 ORTHO05D001075 1.5e-07 58.9 36 69.4
Gohir.D11G343300 Gossypium hirsutum HOM05D001415 ORTHO05D001075 3.3e-07 57.8 37 62.2
Gorai.007G373400 Gossypium raimondii HOM05D001415 ORTHO05D001075 3.3e-07 57.8 37 62.2
Glyma.13G143700 Glycine max HOM05D001415 ORTHO05D001075 9.5e-07 56.2 37 56.8
DCAR_020825 Daucus carota HOM05D001415 ORTHO05D001075 1.2e-06 55.8 42 57.1
GSVIVG01025722001 Vitis vinifera HOM05D001415 ORTHO05D001075 1.6e-06 55.5 35 65.7
ClCG04G009250 Citrullus lanatus HOM05D001415 ORTHO05D001075 2.8e-06 54.7 39 56.4
Manes.10G049900 Manihot esculenta HOM05D001415 ORTHO05D001075 2.8e-06 54.7 50 48.0
Nn2g13768 Nelumbo nucifera HOM05D001415 ORTHO05D001075 2.8e-06 54.7 49 46.9
Potri.010G226250 Populus trichocarpa HOM05D001415 ORTHO05D001075 2.8e-06 54.7 52 48.1
Medtr1g063830 Medicago truncatula HOM05D001415 ORTHO05D001075 3.6e-06 54.3 41 51.2
CSS0026842 Camellia sinensis var. sinensis HOM05D001415 ORTHO05D001075 6.2e-06 53.5 48 47.9
Migut.L01694 Erythranthe guttata HOM05D001415 ORTHO05D001075 6.2e-06 53.5 48 50.0
Gorai.009G311300 Gossypium raimondii HOM05D001415 ORTHO05D001075 6.2e-06 53.5 52 42.3
CAN.G900.45 Capsicum annuum HOM05D001415 ORTHO05D001075 8.1e-06 53.1 33 69.7
Migut.J00518 Erythranthe guttata HOM05D001415 ORTHO05D001075 8.1e-06 53.1 36 58.3


User provided reference genes

Program Settings