Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p20170 Brassica napus HOM05D007405 ORTHO05D009256 1.4e-104 384.8 673 100.0
BraA07t29716Z Brassica rapa HOM05D007405 ORTHO05D009256 2.0e-103 380.9 673 99.1
BcaC08g44440 Brassica carinata HOM05D007405 ORTHO05D009256 6.8e-96 355.9 679 96.9
C06p18840 Brassica napus HOM05D007405 ORTHO05D009256 6.8e-96 355.9 679 96.9
BolC6t37089H Brassica oleracea HOM05D007405 ORTHO05D009256 6.8e-96 355.9 679 96.9
Sp7g02090 Schrenkiella parvula HOM05D007405 ORTHO05D009256 2.9e-83 313.9 681 93.7
Thhalv10028245m.g Eutrema salsugineum HOM05D007405 ORTHO05D009256 2.0e-79 301.2 680 93.4
BcaB02g07958 Brassica carinata HOM05D007405 ORTHO05D009256 6.4e-78 296.2 679 92.6
AT5G39980 Arabidopsis thaliana HOM05D007405 ORTHO05D009256 2.4e-77 294.3 679 92.5
AL7G50110 Arabidopsis lyrata HOM05D007405 ORTHO05D009256 1.3e-75 288.5 682 91.3
CARHR262150 Cardamine hirsuta HOM05D007405 ORTHO05D009256 1.9e-74 284.6 686 91.1
Carub.0007s3571 Capsella rubella HOM05D007405 ORTHO05D009256 1.7e-67 261.5 681 90.2
Aa31LG9G1630 Aethionema arabicum HOM05D000330 ORTHO05D009256 1.6e-65 255.0 680 88.7
THA.LOC104823926 Tarenaya hassleriana HOM05D007405 ORTHO05D009256 2.9e-54 217.6 190 66.3
QL02p079911 Quercus lobata HOM05D007405 ORTHO05D009256 3.3e-50 204.1 186 62.9
CiPaw.04G020600 Carya illinoinensis HOM05D007405 ORTHO05D009256 2.1e-49 201.4 185 61.1
Prupe.3G273600 Prunus persica HOM05D007405 ORTHO05D009256 1.8e-48 198.4 187 59.9
Cfa007501 Carpinus fangiana HOM05D007405 ORTHO05D009256 4.0e-48 197.2 179 60.9
TWI56G0828 Tripterygium wilfordii HOM05D007405 ORTHO05D009256 6.9e-48 196.4 181 60.2
MD09G1044200 Malus domestica HOM05D007405 ORTHO05D009256 1.2e-47 195.7 191 58.1
Haze_14594 Corylus avellana HOM05D007405 ORTHO05D009256 2.6e-47 194.5 179 61.5
Atru.chr8.2441 Acer truncatum HOM05D007405 ORTHO05D009256 7.6e-47 193.0 172 61.6
GSVIVG01032591001 Vitis vinifera HOM05D007405 ORTHO05D009256 3.2e-45 187.6 188 58.5
CANSAT64G0564 Cannabis sativa HOM05D007405 ORTHO05D009256 4.2e-45 187.2 179 61.5
Ciclev10011224m.g Citrus clementina HOM05D007405 ORTHO05D009256 1.2e-44 185.7 186 54.8
ClCG10G014780 Citrullus lanatus HOM05D007405 ORTHO05D009256 1.6e-44 185.3 188 60.1
CsaV3_3G041760 Cucumis sativus L. HOM05D007405 ORTHO05D009256 1.6e-44 185.3 188 59.0
MELO3C009896.2 Cucumis melo HOM05D007405 ORTHO05D009256 2.7e-44 184.5 150 66.7
Migut.H00884 Erythranthe guttata HOM05D007405 ORTHO05D009256 2.7e-44 184.5 157 65.0
Duzib147G0736 Durio zibethinus HOM05D007405 ORTHO05D009256 6.0e-44 183.3 183 55.7
Oeu027767.1 Olea europaea HOM05D007405 ORTHO05D009256 3.9e-43 180.6 169 58.6
Manes.17G025500 Manihot esculenta HOM05D007405 ORTHO05D009256 6.6e-43 179.9 177 58.2
Ah.10g031180 Amaranthus hybridus HOM05D007405 ORTHO05D009256 1.1e-42 179.1 157 59.9
HanXRQChr14g0449381 Helianthus annuus HOM05D007405 ORTHO05D009256 1.1e-42 179.1 186 54.3
Sabra17G0067600 Salix brachista HOM05D007405 ORTHO05D009256 1.1e-42 179.1 178 59.0
Lsat_1_v5_gn_2_90480 Lactuca sativa HOM05D007405 ORTHO05D009256 1.5e-42 178.7 179 58.1
AUR62018305 Chenopodium quinoa HOM05D007405 ORTHO05D009256 2.5e-42 177.9 158 61.4
Thecc.04G073000 Theobroma cacao HOM05D007405 ORTHO05D009256 2.5e-42 177.9 173 57.2
Sed0003758 Sechium edule HOM05D007405 ORTHO05D009256 3.3e-42 177.6 187 56.1
Sopen02g032330 Solanum pennellii HOM05D007405 ORTHO05D009256 5.6e-42 176.8 181 57.5
EL10Ac2g02615 Beta vulgaris HOM05D007405 ORTHO05D009256 7.3e-42 176.4 154 61.0
AUR62030576 Chenopodium quinoa HOM05D007405 ORTHO05D009256 7.3e-42 176.4 158 60.8
FAN14G0904 Fragaria x ananassa HOM05D007405 ORTHO05D009256 7.3e-42 176.4 183 57.9
FAN14G4765 Fragaria x ananassa HOM05D007405 ORTHO05D009256 7.3e-42 176.4 183 57.9
Gohir.A07G215301 Gossypium hirsutum HOM05D007405 ORTHO05D009256 7.3e-42 176.4 180 55.0
Gohir.D07G222200 Gossypium hirsutum HOM05D007405 ORTHO05D009256 7.3e-42 176.4 180 54.4
Gorai.001G256500 Gossypium raimondii HOM05D007405 ORTHO05D009256 7.3e-42 176.4 180 54.4
Potri.017G075700 Populus trichocarpa HOM05D007405 ORTHO05D009256 9.6e-42 176.0 178 57.9
Nitab4.5_0002265g0130 Nicotiana tabacum HOM05D007405 ORTHO05D009256 1.3e-41 175.6 183 54.1
CSS0008879 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 1.6e-41 175.3 182 53.8
FAN09G1987 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.6e-41 175.3 184 56.5
CAN.G206.101 Capsicum annuum HOM05D007405 ORTHO05D009256 2.1e-41 174.9 182 57.1
Solyc02g087560.1 Solanum lycopersicum HOM05D007405 ORTHO05D009256 2.1e-41 174.9 182 57.1
FvH4_6g49520 Fragaria vesca HOM05D007405 ORTHO05D009256 6.2e-41 173.3 179 58.1
FAN05G4748 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.1e-40 172.6 185 54.6
Lj6g0001930 Lotus japonicus HOM05D007405 ORTHO05D009256 1.8e-40 171.8 149 62.4
CSS0011088 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 3.1e-40 171.0 106 76.4
Dinv33696 Davidia involucrata HOM05D007405 ORTHO05D009256 4.0e-40 170.6 171 57.3
RcHm_v2.0_Chr2g0169431 Rosa chinensis HOM05D007405 ORTHO05D009256 6.9e-40 169.9 123 69.9
Lj7A402T45 Lonicera japonica HOM05D007405 ORTHO05D009256 1.2e-39 169.1 174 57.5
FAN02G3321 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.5e-39 168.7 185 55.7
FAN02G3519 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.5e-39 168.7 185 55.7
Lalb_Chr23g0278451 Lupinus albus HOM05D007405 ORTHO05D009256 2.6e-39 167.9 143 62.2
SGA_v2.0_scaffold115G32153 Striga asiatica HOM05D007405 ORTHO05D009256 2.6e-39 167.9 183 53.6
MSTRG.19401 Avicennia marina HOM05D007405 ORTHO05D009256 5.8e-39 166.8 169 55.6
PGR031G2628 Punica granatum HOM05D007405 ORTHO05D009256 7.6e-39 166.4 175 56.0
Cpa.g.sc14.54 Carica papaya HOM05D007405 ORTHO05D009256 1.3e-38 165.6 99 82.8
DCAR_011169 Daucus carota HOM05D007405 ORTHO05D009256 1.3e-38 165.6 176 54.0
Glyma.18G000700 Glycine max HOM05D007405 ORTHO05D009256 2.9e-38 164.5 145 58.6
TAR039G0001 Trochodendron aralioides HOM05D002295 ORTHO05D002789 4.9e-38 163.7 152 60.5
Cc07_g02870 Coffea canephora HOM05D007405 ORTHO05D009256 1.6e-36 158.7 99 77.8
COL.COLO4_25223 Corchorus olitorius HOM05D000330 ORTHO05D000209 3.5e-36 157.5 104 74.0
VMungo1383G1541 Vigna mungo HOM05D007405 ORTHO05D009256 4.6e-36 157.1 148 55.4
Nn1g09226 Nelumbo nucifera HOM05D007405 ORTHO05D009256 1.3e-35 155.6 180 52.2
PSO832G3067 Papaver somniferum HOM05D007405 ORTHO05D009256 2.3e-35 154.8 107 69.2
Actinidia36037 Actinidia chinensis HOM05D007405 ORTHO05D009256 3.0e-35 154.5 182 50.0
Glyma.11G256300 Glycine max HOM05D007405 ORTHO05D009256 3.0e-35 154.5 106 68.9
TPR.G22753 Trifolium pratense HOM05D007405 ORTHO05D009256 5.1e-35 153.7 150 56.7
Psat5g105040 Pisum sativum HOM05D007405 ORTHO05D009256 1.5e-34 152.1 189 47.6
PGSC0003DMG400001306 Solanum tuberosum HOM05D007405 ORTHO05D009256 2.5e-34 151.4 99 74.7
PSO591G0419 Papaver somniferum HOM05D007405 ORTHO05D009256 5.6e-34 150.2 106 67.0
Medtr3g083680 Medicago truncatula HOM05D007405 ORTHO05D009256 1.6e-33 148.7 109 65.1
Sc11g0006880 Simmondsia chinensis HOM05D007405 ORTHO05D009256 4.8e-33 147.1 169 52.7
Ca_16386_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 1.4e-32 145.6 147 53.1
Ca_29700_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 1.4e-32 145.6 147 53.1
Rhsim10G0030900 Rhododendron simsii HOM05D007405 ORTHO05D009256 1.5e-31 142.1 95 72.6
Phvul.001G268500 Phaseolus vulgaris HOM05D007405 ORTHO05D009256 1.5e-23 115.5 63 84.1
Peaxi162Scf00129g00512 Petunia axillaris HOM05D007405 ORTHO05D009256 2.0e-23 115.2 69 76.8
ATR1127G129 Amborella trichopoda HOM05D007405 ORTHO05D009256 1.0e-22 112.8 158 43.7
Nitab4.5_0000564g0400 Nicotiana tabacum HOM05D007405 ORTHO05D009256 6.5e-22 110.2 62 80.6
MBI08_g09795_MAGBIO Magnolia biondii HOM05D007405 ORTHO05D009256 7.1e-21 106.7 93 58.1
SEGI_22031 Sequoiadendron giganteum HOM05D007405 ORTHO05D009256 1.3e-19 102.4 98 49.0
Pp3c3_5760 Physcomitrium patens HOM05D007405 ORTHO05D009256 3.9e-19 100.9 102 43.1
Pp3c3_5764 Physcomitrium patens HOM05D007405 ORTHO05D009256 3.9e-19 100.9 102 43.1
CDE06G2170 Ceratophyllum demersum HOM05D007405 ORTHO05D009256 3.3e-18 97.8 63 74.6
HPP92_019727 Vanilla planifolia HOM05D007405 ORTHO05D009256 2.8e-17 94.7 105 50.5
AagrBONN_evm.TU.Sc2ySwM_117.2241 Anthoceros agrestis HOM05D007405 ORTHO05D009256 3.1e-16 91.3 100 45.0
Eucgr.J02141 Eucalyptus grandis HOM05D007405 ORTHO05D009256 5.3e-16 90.5 52 78.8
Mapoly0061s0076 Marchantia polymorpha HOM05D007405 ORTHO05D009256 1.2e-15 89.4 134 37.3
Zm00001eb148940 Zea mays HOM05D007405 ORTHO05D009256 1.4e-13 82.4 63 60.3
SMO367G0452 Selaginella moellendorffii HOM05D007405 ORTHO05D009256 2.7e-12 78.2 59 59.3
Os01g0833000 Oryza sativa ssp. japonica HOM05D007405 ORTHO05D009256 1.8e-11 75.5 63 52.4
FAN02G2814 Fragaria x ananassa HOM05D007405 ORTHO05D009256 3.3e-10 71.2 36 91.7
Actinidia06059 Actinidia chinensis HOM05D007405 ORTHO05D009256 1.2e-07 62.8 44 77.3
Actinidia06062 Actinidia chinensis HOM05D007405 ORTHO05D009256 1.5e-07 62.4 44 77.3


User provided reference genes

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