Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p17440 Brassica napus HOM05D004813 ORTHO05D005889 3.4e-260 901.4 529 100.0
BraA07t29465Z Brassica rapa HOM05D004813 ORTHO05D005889 1.5e-212 743.0 449 97.8
A09p09960 Brassica napus HOM05D004813 ORTHO05D005889 1.1e-207 726.9 531 84.4
BraA09t36642Z Brassica rapa HOM05D004813 ORTHO05D005889 1.7e-206 723.0 528 84.5
BolC9t54072H Brassica oleracea HOM05D004813 ORTHO05D005889 6.9e-205 717.6 531 83.4
BcaB02g10019 Brassica carinata HOM05D004813 ORTHO05D005889 1.3e-203 713.4 529 85.4
BcaC04g23133 Brassica carinata HOM05D004813 ORTHO05D005889 1.7e-203 713.0 531 83.4
Sp2g30180 Schrenkiella parvula HOM05D004813 ORTHO05D005889 2.9e-203 712.2 528 83.0
BcaNung05723 Brassica carinata HOM05D004813 ORTHO05D005889 3.6e-201 705.3 533 82.6
C09p11820 Brassica napus HOM05D004813 ORTHO05D005889 7.9e-201 704.1 531 83.4
Thhalv10003981m.g Eutrema salsugineum HOM05D004813 ORTHO05D005889 1.1e-197 693.7 527 81.4
Carub.0008s2799 Capsella rubella HOM05D004813 ORTHO05D005889 1.0e-184 650.6 526 77.2
AT5G66540 Arabidopsis thaliana HOM05D004813 ORTHO05D005889 1.7e-182 643.3 527 77.0
CARHR281210 Cardamine hirsuta HOM05D004813 ORTHO05D005889 6.3e-182 641.3 537 75.6
AL8G44980 Arabidopsis lyrata HOM05D004813 ORTHO05D005889 1.2e-180 637.1 524 77.1
Carub.0002s0981 Capsella rubella HOM05D004813 ORTHO05D005889 1.6e-180 636.7 525 76.0
Aa31LG1G15060 Aethionema arabicum HOM05D004813 ORTHO05D005889 1.3e-171 607.1 536 71.8
Potri.012G082600 Populus trichocarpa HOM05D004813 ORTHO05D005889 1.1e-141 507.7 525 61.5
Cpa.g.sc76.31 Carica papaya HOM05D004813 ORTHO05D005889 9.2e-141 504.6 511 66.5
CSS0044871 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 8.7e-139 498.0 545 61.7
Dinv20637 Davidia involucrata HOM05D004813 ORTHO05D005889 1.1e-138 497.7 530 62.3
CSS0009747 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 6.2e-137 491.9 542 61.6
Cc04_g12130 Coffea canephora HOM05D004813 ORTHO05D005889 1.1e-136 491.1 540 60.4
Nn4g22713 Nelumbo nucifera HOM05D004813 ORTHO05D005889 1.4e-136 490.7 536 61.6
Sabra15G0103000 Salix brachista HOM05D004813 ORTHO05D005889 2.4e-136 490.0 526 61.6
Ciclev10019513m.g Citrus clementina HOM05D004813 ORTHO05D005889 3.1e-136 489.6 546 60.8
Thecc.03G014500 Theobroma cacao HOM05D004813 ORTHO05D005889 2.0e-135 486.9 552 62.0
Manes.14G064300 Manihot esculenta HOM05D004813 ORTHO05D005889 3.4e-135 486.1 551 57.7
Nitab4.5_0000514g0060 Nicotiana tabacum HOM05D004813 ORTHO05D005889 1.1e-133 481.1 541 59.3
MBI17_g17505_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 4.2e-133 479.2 548 61.5
MELO3C026213.2 Cucumis melo HOM05D004813 ORTHO05D005889 5.4e-133 478.8 542 60.3
Gorai.008G296300 Gossypium raimondii HOM05D004813 ORTHO05D005889 9.3e-133 478.0 537 60.9
Cfa019150 Carpinus fangiana HOM05D004813 ORTHO05D005889 1.6e-132 477.2 517 54.9
Gohir.D12G275800 Gossypium hirsutum HOM05D004813 ORTHO05D005889 3.5e-132 476.1 550 59.6
COL.COLO4_30069 Corchorus olitorius HOM05D004813 ORTHO05D005889 4.6e-132 475.7 545 57.2
CsaV3_1G000640 Cucumis sativus L. HOM05D004813 ORTHO05D005889 4.6e-132 475.7 543 57.8
MBI16_g39216_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 6.0e-132 475.3 526 60.8
TAR629G2765 Trochodendron aralioides HOM05D004813 ORTHO05D005889 1.3e-131 474.2 527 61.1
MBI16_g37492_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 5.1e-131 472.2 532 62.0
Peaxi162Scf00089g01844 Petunia axillaris HOM05D004813 ORTHO05D005889 3.3e-130 469.5 524 58.0
TWI14G0980 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 7.3e-130 468.4 557 57.5
Phvul.003G201700 Phaseolus vulgaris HOM05D004813 ORTHO05D005889 1.3e-129 467.6 536 57.1
Potri.015G078500 Populus trichocarpa HOM05D004813 ORTHO05D005889 1.4e-128 464.2 526 61.0
Eucgr.K02829 Eucalyptus grandis HOM05D004813 ORTHO05D005889 3.1e-128 463.0 572 57.7
Oeu016404.1 Olea europaea HOM05D004813 ORTHO05D005889 3.1e-128 463.0 529 58.8
Gohir.A12G275100 Gossypium hirsutum HOM05D004813 ORTHO05D005889 4.0e-128 462.6 539 59.2
Glyma.05G038800 Glycine max HOM05D004813 ORTHO05D005889 9.0e-128 461.5 534 59.6
Atru.chr8.1447 Acer truncatum HOM05D004813 ORTHO05D005889 7.6e-127 458.4 544 60.1
PGR044G0958 Punica granatum HOM05D004813 ORTHO05D005889 1.7e-126 457.2 551 58.1
arahy.Tifrunner.gnm1.ann1.9LWV25 Arachis hypogaea HOM05D004813 ORTHO05D005889 1.4e-125 454.1 544 55.9
arahy.Tifrunner.gnm1.ann1.J26J1M Arachis hypogaea HOM05D004813 ORTHO05D005889 1.4e-125 454.1 542 55.9
QL10p010983 Quercus lobata HOM05D004813 ORTHO05D005889 3.2e-125 453.0 552 58.9
VMungo1215G0389 Vigna mungo HOM05D004813 ORTHO05D005889 3.2e-125 453.0 537 56.8
GSVIVG01007723001 Vitis vinifera HOM05D004813 ORTHO05D005889 3.2e-125 453.0 512 52.7
Glyma.17G088200 Glycine max HOM05D004813 ORTHO05D005889 1.6e-124 450.7 530 57.4
CiPaw.11G024600 Carya illinoinensis HOM05D004813 ORTHO05D005889 2.1e-124 450.3 524 60.1
TWI23G0210 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 2.1e-124 450.3 565 54.5
CANSAT80G1068 Cannabis sativa HOM05D004813 ORTHO05D005889 2.7e-124 449.9 533 60.4
Lj4g0001275 Lotus japonicus HOM05D004813 ORTHO05D005889 2.7e-124 449.9 558 57.2
Sed0018710 Sechium edule HOM05D004813 ORTHO05D005889 2.7e-124 449.9 543 58.9
Prupe.5G171700 Prunus persica HOM05D004813 ORTHO05D005889 3.5e-124 449.5 546 57.9
MD14G1178200 Malus domestica HOM05D004813 ORTHO05D005889 2.3e-123 446.8 540 57.8
Lalb_Chr07g0182801 Lupinus albus HOM05D004813 ORTHO05D005889 5.1e-123 445.7 540 57.2
vmacro16622 Vaccinium macrocarpon HOM05D004813 ORTHO05D005889 6.7e-123 445.3 559 54.9
Psat4g058360 Pisum sativum HOM05D004813 ORTHO05D005889 1.1e-122 444.5 529 51.0
DCAR_031351 Daucus carota HOM05D004813 ORTHO05D005889 1.9e-122 443.7 512 57.6
Haze_07517 Corylus avellana HOM05D004813 ORTHO05D005889 1.3e-121 441.0 546 58.4
Ca_21934_v3 Cicer arietinum L. HOM05D004813 ORTHO05D005889 2.4e-120 436.8 533 55.0
MD06G1172400 Malus domestica HOM05D004813 ORTHO05D005889 2.4e-120 436.8 540 56.7
CDE05G0644 Ceratophyllum demersum HOM05D004813 ORTHO05D005889 4.0e-120 436.0 565 55.0
PGSC0003DMG400018096 Solanum tuberosum HOM05D004813 ORTHO05D005889 1.5e-119 434.1 533 58.5
Lsat_1_v5_gn_4_75841 Lactuca sativa HOM05D004813 ORTHO05D005889 2.0e-119 433.7 557 54.8
Solyc03g112820.4 Solanum lycopersicum HOM05D004813 ORTHO05D005889 5.8e-119 432.2 533 57.4
Sopen03g031900 Solanum pennellii HOM05D004813 ORTHO05D005889 5.8e-119 432.2 530 59.2
Sc04g0001740 Simmondsia chinensis HOM05D004813 ORTHO05D005889 7.6e-119 431.8 568 53.9
Hund02755 Selenicereus undatus HOM05D004813 ORTHO05D005889 2.4e-117 426.8 542 54.8
Medtr4g105590 Medicago truncatula HOM05D004813 ORTHO05D005889 4.6e-116 422.5 554 54.9
unitig_0.g15 Utricularia gibba HOM05D004813 ORTHO05D005889 7.9e-116 421.8 533 55.2
Rhsim12G0165800 Rhododendron simsii HOM05D004813 ORTHO05D005889 1.0e-115 421.4 512 50.8
RcHm_v2.0_Chr7g0193361 Rosa chinensis HOM05D004813 ORTHO05D005889 2.3e-115 420.2 528 55.7
ClCG06G017810 Citrullus lanatus HOM05D004813 ORTHO05D005889 5.1e-115 419.1 606 47.5
Aqoxy3G02883 Aquilegia oxysepala HOM05D004813 ORTHO05D005889 8.7e-115 418.3 549 55.2
PSO832G2178 Papaver somniferum HOM05D004813 ORTHO05D005889 8.7e-115 418.3 542 53.0
ECA232G2493 Erigeron canadensis HOM05D004813 ORTHO05D005889 4.3e-114 416.0 545 50.8
FAN18G4177 Fragaria x ananassa HOM05D004813 ORTHO05D005889 5.6e-114 415.6 517 56.9
FAN04G1884 Fragaria x ananassa HOM05D004813 ORTHO05D005889 3.7e-113 412.9 527 57.3
Migut.D01957 Erythranthe guttata HOM05D004813 ORTHO05D005889 8.2e-113 411.8 572 53.0
PSO063G0570 Papaver somniferum HOM05D004813 ORTHO05D005889 1.1e-112 411.4 542 51.1
SGA_v2.0_scaffold114G31819 Striga asiatica HOM05D004813 ORTHO05D005889 1.1e-112 411.4 601 52.9
FAN13G1879 Fragaria x ananassa HOM05D004813 ORTHO05D005889 1.8e-112 410.6 516 55.6
FAN18G0441 Fragaria x ananassa HOM05D004813 ORTHO05D005889 4.5e-111 406.0 532 57.1
FvH4_5g05471 Fragaria vesca HOM05D004813 ORTHO05D005889 5.8e-111 405.6 530 55.7
FAN08G2504 Fragaria x ananassa HOM05D004813 ORTHO05D005889 1.3e-110 404.4 542 53.5
AUR62013092 Chenopodium quinoa HOM05D004813 ORTHO05D005889 3.8e-110 402.9 490 49.8
HanXRQChr15g0463041 Helianthus annuus HOM05D004813 ORTHO05D005889 6.5e-110 402.1 550 52.5
Lj9A420T39 Lonicera japonica HOM05D004813 ORTHO05D005889 2.5e-109 400.2 524 47.9
TPR.G37503 Trifolium pratense HOM05D004813 ORTHO05D005889 7.1e-109 398.7 549 52.5
Atru.chr9.2495 Acer truncatum HOM05D004813 ORTHO05D005889 2.7e-108 396.7 560 52.3
AUR62010096 Chenopodium quinoa HOM05D004813 ORTHO05D005889 2.7e-108 396.7 507 47.9
ATR1091G095 Amborella trichopoda HOM05D004813 ORTHO05D005889 3.5e-108 396.4 535 46.4
EL10Ac9g21440 Beta vulgaris HOM05D004813 ORTHO05D005889 6.7e-107 392.1 550 52.2
SalBow6G0518 Salvia bowleyana HOM05D004813 ORTHO05D005889 3.7e-105 386.3 582 51.2
Zm00001eb293550 Zea mays HOM05D004813 ORTHO05D005889 9.0e-104 381.7 534 53.6
Os12g0133900 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 1.2e-100 371.3 532 53.2
HPP92_018752 Vanilla planifolia HOM05D004813 ORTHO05D005889 7.9e-100 368.6 505 56.2
Os11g0137100 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 2.5e-98 363.6 527 53.1
Haze_17000 Corylus avellana HOM05D004813 ORTHO05D005889 1.8e-96 357.5 524 48.7
Ah.01g009190 Amaranthus hybridus HOM05D004813 ORTHO05D005889 7.0e-88 328.9 580 46.9
Nitab4.5_0008678g0020 Nicotiana tabacum HOM05D004813 ORTHO05D005889 9.1e-88 328.6 290 63.8
BolC7t43059H Brassica oleracea HOM05D004813 ORTHO05D005889 2.1e-84 317.4 284 68.0
MD01G1006000 Malus domestica HOM05D004813 ORTHO05D005889 2.7e-84 317.0 345 57.7
Mapoly0077s0037 Marchantia polymorpha HOM05D004813 ORTHO05D005889 3.0e-83 313.5 519 43.9
Pp3c4_31210 Physcomitrium patens HOM05D004813 ORTHO05D005889 2.0e-79 300.8 549 46.3
SMO275G0031 Selaginella moellendorffii HOM05D004813 ORTHO05D005889 3.5e-79 300.1 471 43.9
C07p25370 Brassica napus HOM05D004813 ORTHO05D005889 3.2e-77 293.5 287 66.2
SMO367G0656 Selaginella moellendorffii HOM05D004813 ORTHO05D005889 2.1e-76 290.8 449 47.2
Psat4g058280 Pisum sativum HOM05D004813 ORTHO05D005889 1.7e-73 281.2 493 40.0
Oeu020911.1 Olea europaea HOM05D004813 ORTHO05D005889 1.8e-72 277.7 522 43.5
AagrBONN_evm.TU.Sc2ySwM_369.357 Anthoceros agrestis HOM05D004813 ORTHO05D005889 9.1e-72 275.4 551 36.8
Actinidia19105 Actinidia chinensis HOM05D004813 ORTHO05D005889 2.0e-66 257.7 354 53.4
CAN.G1166.5 Capsicum annuum HOM05D004813 ORTHO05D005889 6.3e-57 226.1 177 70.6
arahy.Tifrunner.gnm1.ann1.J34B41 Arachis hypogaea HOM05D004813 ORTHO05D005889 1.8e-56 224.6 198 61.6
CBR_g26354 Chara braunii HOM05D004813 ORTHO05D005889 1.3e-54 218.4 258 50.8
PGR044G0267 Punica granatum HOM05D004813 ORTHO05D005889 8.6e-54 215.7 212 56.6
SEGI_37748 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 2.5e-53 214.2 359 51.3
BcaC06g34713 Brassica carinata HOM05D004813 ORTHO05D005889 3.6e-52 210.3 220 58.6
BcaNung06644 Brassica carinata HOM05D004813 ORTHO05D005889 3.6e-52 210.3 220 58.6
CAN.G1166.4 Capsicum annuum HOM05D004813 ORTHO05D005889 8.0e-52 209.1 334 48.2
Cre08.g370601 Chlamydomonas reinhardtii HOM05D004813 ORTHO05D005889 1.3e-49 201.8 248 48.0
Actinidia19106 Actinidia chinensis HOM05D004813 ORTHO05D005889 1.7e-46 191.4 125 79.2
BcaB02g10018 Brassica carinata HOM05D004813 ORTHO05D005889 1.2e-44 185.3 176 80.1
PRCOL_00002680 Prasinoderma coloniale HOM05D004813 ORTHO05D005889 3.0e-38 164.1 237 41.8
SEGI_16864 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 6.6e-30 136.3 100 72.0
MBI07_g10351_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 7.6e-26 122.9 142 51.4
Haze_20617 Corylus avellana HOM05D004813 ORTHO05D005889 4.3e-21 107.1 154 46.8
MBI14_g23619_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 9.0e-19 99.4 62 77.4
MCO01G452 Micromonas commoda HOM05D004813 ORTHO05D005889 2.0e-18 98.2 263 31.2
BcaC04g21797 Brassica carinata HOM05D004813 ORTHO05D005889 2.6e-18 97.8 102 59.8
Lj3g0016907 Lotus japonicus HOM05D004813 ORTHO05D005889 6.0e-15 86.7 63 69.8
MBI05_g41028_MAGBIO Magnolia biondii HOM05D000669 ORTHO05D005889 1.0e-14 85.9 48 87.5
BcaC06g34714 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-12 79.0 46 84.8
Lj6g0012951 Lotus japonicus HOM05D004813 ORTHO05D005889 2.4e-11 74.7 69 59.4
HanXRQChr11g0336351 Helianthus annuus HOM05D004813 ORTHO05D005889 4.0e-11 73.9 77 48.1
SEGI_40991 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 4.0e-11 73.9 79 49.4
Potri.003G194550 Populus trichocarpa HOM05D004813 ORTHO05D005889 5.3e-11 73.6 85 50.6
SalBow1G5081 Salvia bowleyana HOM05D004813 ORTHO05D018488 5.3e-11 73.6 66 66.7
arahy.Tifrunner.gnm1.ann1.YI6NTU Arachis hypogaea HOM05D004813 ORTHO05D005889 1.3e-09 68.9 57 68.4
MBI14_g41770_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 6.4e-09 66.6 69 53.6
MBI03_g03787_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 4.2e-08 63.9 37 78.4
Mapoly0050s0001 Marchantia polymorpha HOM05D004813 ORTHO05D005889 8.7e-06 56.2 100 38.0


User provided reference genes

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