Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p15730 Brassica napus HOM05D004247 ORTHO05D004994 1.3e-83 313.2 168 100.0
A07p15830 Brassica napus HOM05D004247 ORTHO05D004994 1.3e-83 313.2 168 100.0
BraA07t29309Z Brassica rapa HOM05D004247 ORTHO05D004994 1.3e-83 313.2 168 100.0
Sp1g18060 Schrenkiella parvula HOM05D004247 ORTHO05D004994 2.2e-80 302.4 168 95.8
BolC7t42849H Brassica oleracea HOM05D004247 ORTHO05D004994 2.9e-80 302.0 168 96.4
BcaNung03373 Brassica carinata HOM05D004247 ORTHO05D004994 4.9e-80 301.2 168 95.8
C07p23120 Brassica napus HOM05D004247 ORTHO05D004994 4.9e-80 301.2 168 95.8
Thhalv10008749m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 4.9e-80 301.2 168 94.6
BcaB07g32038 Brassica carinata HOM05D004247 ORTHO05D004994 1.3e-77 293.1 168 93.5
A06p16430 Brassica napus HOM05D004247 ORTHO05D004994 1.1e-76 290.0 168 93.5
BraA06t24747Z Brassica rapa HOM05D004247 ORTHO05D004994 1.1e-76 290.0 168 93.5
BcaC05g25945 Brassica carinata HOM05D004247 ORTHO05D004994 1.6e-75 286.2 169 92.3
C05p18970 Brassica napus HOM05D004247 ORTHO05D004994 1.6e-75 286.2 169 92.3
BolC5t30597H Brassica oleracea HOM05D004247 ORTHO05D004994 1.6e-75 286.2 169 92.3
BcaB03g12872 Brassica carinata HOM05D004247 ORTHO05D004994 4.8e-75 284.6 168 91.1
A08p29430 Brassica napus HOM05D004247 ORTHO05D004994 1.1e-74 283.5 168 91.1
BraA08t34878Z Brassica rapa HOM05D004247 ORTHO05D004994 1.1e-74 283.5 168 91.1
BcaC07g39030 Brassica carinata HOM05D004247 ORTHO05D004994 4.0e-74 281.6 168 90.5
C08p20070 Brassica napus HOM05D004247 ORTHO05D004994 3.4e-73 278.5 168 89.9
BolC8t49642H Brassica oleracea HOM05D004247 ORTHO05D004994 1.0e-72 276.9 165 90.3
AT1G20340 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 2.9e-72 275.4 168 86.3
AL1G33170 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 2.5e-71 272.3 168 85.1
Carub.0001s1985 Capsella rubella HOM05D004247 ORTHO05D004994 2.5e-71 272.3 168 86.9
CARHR020810 Cardamine hirsuta HOM05D004247 ORTHO05D004994 4.6e-70 268.1 169 84.0
THA.LOC104813771 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 3.7e-67 258.5 173 80.9
Aa31LG7G4700 Aethionema arabicum HOM05D004247 ORTHO05D004994 2.2e-64 249.2 168 78.6
BraA07t31695Z Brassica rapa HOM05D004247 ORTHO05D004994 3.8e-64 248.4 171 78.4
C06p50040 Brassica napus HOM05D004247 ORTHO05D004994 6.5e-64 247.7 171 78.9
A07p41660 Brassica napus HOM05D004247 ORTHO05D004994 8.4e-64 247.3 171 78.4
Sp5g31220 Schrenkiella parvula HOM05D004247 ORTHO05D004994 8.4e-64 247.3 170 79.4
BcaC08g47103 Brassica carinata HOM05D004247 ORTHO05D004994 1.4e-63 246.5 170 78.2
BcaC08g47292 Brassica carinata HOM05D004247 ORTHO05D004994 1.4e-63 246.5 171 78.4
BolC6t40043H Brassica oleracea HOM05D004247 ORTHO05D004994 1.4e-63 246.5 171 78.4
THA.LOC104809663 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 2.5e-63 245.7 173 78.6
Thhalv10019237m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 5.5e-63 244.6 169 80.5
AT1G76100 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 2.7e-62 242.3 172 77.3
AL2G36140 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 1.0e-61 240.4 172 75.6
CARHR069640 Cardamine hirsuta HOM05D004247 ORTHO05D004994 5.1e-61 238.0 172 75.6
CsaV3_3G046150 Cucumis sativus L. HOM05D004247 ORTHO05D004994 1.1e-60 236.9 169 74.0
MELO3C003725.2 Cucumis melo HOM05D004247 ORTHO05D004994 2.5e-60 235.7 169 74.0
COL.COLO4_26078 Corchorus olitorius HOM05D004247 ORTHO05D004994 1.3e-59 233.4 168 70.8
Aa31LG4G6220 Aethionema arabicum HOM05D004247 ORTHO05D004994 8.2e-59 230.7 170 74.7
ClCG05G015390 Citrullus lanatus HOM05D004247 ORTHO05D004994 2.4e-58 229.2 170 71.2
Lj4P802T100 Lonicera japonica HOM05D004247 ORTHO05D004994 2.4e-58 229.2 168 70.8
Glyma.04G020300 Glycine max HOM05D004247 ORTHO05D004994 3.1e-58 228.8 168 72.0
TWI56G0334 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 3.1e-58 228.8 169 72.8
Ah.04g150590 Amaranthus hybridus HOM05D004247 ORTHO05D004994 6.9e-58 227.6 169 70.4
Lj1g0015317 Lotus japonicus HOM05D004247 ORTHO05D004994 9.0e-58 227.3 168 70.2
Lalb_Chr01g0008481 Lupinus albus HOM05D004247 ORTHO05D004994 9.0e-58 227.3 169 68.6
Ca_15453_v3 Cicer arietinum L. HOM05D004247 ORTHO05D004994 3.4e-57 225.3 168 69.0
Medtr3g114850 Medicago truncatula HOM05D004247 ORTHO05D004994 3.4e-57 225.3 168 68.5
Nitab4.5_0003030g0010 Nicotiana tabacum HOM05D004247 ORTHO05D004994 4.5e-57 224.9 170 71.8
FAN15G0804 Fragaria x ananassa HOM05D004247 ORTHO05D004994 5.9e-57 224.6 168 69.0
FAN20G0823 Fragaria x ananassa HOM05D004247 ORTHO05D004994 5.9e-57 224.6 168 68.5
Peaxi162Scf00174g00103 Petunia axillaris HOM05D004247 ORTHO05D004994 5.9e-57 224.6 168 69.0
arahy.Tifrunner.gnm1.ann1.X4SEKR Arachis hypogaea HOM05D004247 ORTHO05D004994 1.0e-56 223.8 171 72.5
arahy.Tifrunner.gnm1.ann1.X5CP5W Arachis hypogaea HOM05D004247 ORTHO05D004994 1.3e-56 223.4 171 71.3
MD15G1006300 Malus domestica HOM05D004247 ORTHO05D004994 1.3e-56 223.4 169 72.2
Nitab4.5_0007524g0020 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.3e-56 223.4 169 72.2
CiPaw.08G069600 Carya illinoinensis HOM05D004247 ORTHO05D004994 2.2e-56 222.6 169 70.4
FvH4_2g37890 Fragaria vesca HOM05D004247 ORTHO05D004994 2.2e-56 222.6 168 67.9
Lalb_Chr03g0033581 Lupinus albus HOM05D004247 ORTHO05D004994 2.2e-56 222.6 168 70.2
TPR.G38114 Trifolium pratense HOM05D004247 ORTHO05D004994 2.9e-56 222.2 168 67.9
Cpa.g.sc26.256 Carica papaya HOM05D004247 ORTHO05D004994 3.8e-56 221.9 170 69.4
FAN27G2657 Fragaria x ananassa HOM05D004247 ORTHO05D004994 3.8e-56 221.9 168 67.9
Haze_22717 Corylus avellana HOM05D004247 ORTHO05D004994 5.0e-56 221.5 169 69.8
Hma1.2p1_2322F.1_g319850 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 5.0e-56 221.5 169 70.4
Nitab4.5_0001936g0030 Nicotiana tabacum HOM05D004247 ORTHO05D004994 5.0e-56 221.5 169 71.6
RcHm_v2.0_Chr6g0303721 Rosa chinensis HOM05D004247 ORTHO05D004994 6.5e-56 221.1 168 69.0
Cc10_g01080 Coffea canephora HOM05D004247 ORTHO05D004994 8.5e-56 220.7 168 69.6
Migut.N03188 Erythranthe guttata HOM05D004247 ORTHO05D004994 1.9e-55 219.5 170 68.8
Ciclev10002698m.g Citrus clementina HOM05D004247 ORTHO05D004994 2.5e-55 219.2 170 69.4
QL02p013016 Quercus lobata HOM05D004247 ORTHO05D004994 2.5e-55 219.2 168 67.9
Cfa014015 Carpinus fangiana HOM05D004247 ORTHO05D004994 3.2e-55 218.8 169 69.8
Psat5g011080 Pisum sativum HOM05D004247 ORTHO05D004994 3.2e-55 218.8 169 68.0
VMungo1309G1934 Vigna mungo HOM05D004247 ORTHO05D004994 3.2e-55 218.8 169 69.2
Thecc.08G052400 Theobroma cacao HOM05D004247 ORTHO05D004994 4.2e-55 218.4 170 68.8
Hma1.2p1_3012F.1_g331630 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 5.5e-55 218.0 169 69.2
Sc26g0004480 Simmondsia chinensis HOM05D004247 ORTHO05D004994 5.5e-55 218.0 170 67.1
Lj4C16T12 Lonicera japonica HOM05D004247 ORTHO05D004994 7.2e-55 217.6 171 66.1
Sabra05G0190200 Salix brachista HOM05D004247 ORTHO05D004994 7.2e-55 217.6 169 68.0
Gohir.D05G185400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 1.2e-54 216.9 170 69.4
Gorai.009G190800 Gossypium raimondii HOM05D004247 ORTHO05D004994 1.2e-54 216.9 170 69.4
CSS0046333 Camellia sinensis var. sinensis HOM05D004247 ORTHO05D004994 1.6e-54 216.5 171 70.8
MD08G1007200 Malus domestica HOM05D004247 ORTHO05D004994 1.6e-54 216.5 169 70.4
Aqoxy6G01936 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 2.1e-54 216.1 169 68.0
GSVIVG01008733001 Vitis vinifera HOM05D004247 ORTHO05D004994 2.1e-54 216.1 169 68.0
ECA232G0296 Erigeron canadensis HOM05D004247 ORTHO05D004994 2.7e-54 215.7 168 70.2
PSO675G9160 Papaver somniferum HOM05D004247 ORTHO05D004994 2.7e-54 215.7 168 66.1
Potri.005G246100 Populus trichocarpa HOM05D004247 ORTHO05D004994 2.7e-54 215.7 169 68.0
CANSAT25G3567 Cannabis sativa HOM05D004247 ORTHO05D004994 3.6e-54 215.3 173 68.8
Gohir.A05G182400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 3.6e-54 215.3 170 69.4
Glyma.06G020400 Glycine max HOM05D004247 ORTHO05D004994 4.6e-54 214.9 168 68.5
TAR381G1019 Trochodendron aralioides HOM05D004247 ORTHO05D004994 4.6e-54 214.9 169 68.6
Duzib116G0390 Durio zibethinus HOM05D004247 ORTHO05D004994 6.1e-54 214.5 170 67.1
PSO541G1800 Papaver somniferum HOM05D004247 ORTHO05D004994 7.9e-54 214.2 168 65.5
Phvul.009G020300 Phaseolus vulgaris HOM05D004247 ORTHO05D004994 7.9e-54 214.2 168 66.1
Prupe.1G358900 Prunus persica HOM05D004247 ORTHO05D004994 7.9e-54 214.2 170 67.1
TAR625G1162 Trochodendron aralioides HOM05D004247 ORTHO05D004994 1.0e-53 213.8 169 68.6
Lalb_Chr19g0131621 Lupinus albus HOM05D004247 ORTHO05D004994 1.4e-53 213.4 168 66.1
CiPaw.07G143100 Carya illinoinensis HOM05D004247 ORTHO05D004994 1.8e-53 213.0 169 66.9
Lsat_1_v5_gn_8_28601 Lactuca sativa HOM05D004247 ORTHO05D004994 1.8e-53 213.0 169 66.9
Rhsim07G0251400 Rhododendron simsii HOM05D004247 ORTHO05D004994 6.7e-53 211.1 170 67.1
Dinv31897 Davidia involucrata HOM05D004247 ORTHO05D004994 8.8e-53 210.7 161 67.7
MBI08_g05719_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 8.8e-53 210.7 164 68.3
Hma1.2p1_0023F.1_g015810 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 1.1e-52 210.3 173 67.6
Manes.05G142000 Manihot esculenta HOM05D004247 ORTHO05D004994 1.5e-52 209.9 170 65.9
Potri.002G016000 Populus trichocarpa HOM05D004247 ORTHO05D004994 2.0e-52 209.5 169 65.1
Lsat_1_v5_gn_0_680 Lactuca sativa HOM05D004247 ORTHO05D004994 3.3e-52 208.8 168 64.9
Sed0002819 Sechium edule HOM05D004247 ORTHO05D004994 3.3e-52 208.8 169 65.7
CAN.G311.79 Capsicum annuum HOM05D004247 ORTHO05D004994 9.7e-52 207.2 168 66.1
PGR031G2466 Punica granatum HOM05D004247 ORTHO05D004994 9.7e-52 207.2 170 65.3
Sabra02G0012900 Salix brachista HOM05D004247 ORTHO05D004994 1.7e-51 206.5 168 64.3
SGA_v2.0_scaffold19G08591 Striga asiatica HOM05D004247 ORTHO05D004994 1.7e-51 206.5 165 66.1
ATR0661G060 Amborella trichopoda HOM05D004247 ORTHO05D004994 2.2e-51 206.1 168 66.1
Oeu021483.1 Olea europaea HOM05D004247 ORTHO05D004994 3.7e-51 205.3 170 66.5
Sed0013890 Sechium edule HOM05D004247 ORTHO05D004994 6.3e-51 204.5 168 65.5
Actinidia37957 Actinidia chinensis HOM05D004247 ORTHO05D004994 8.2e-51 204.1 168 64.9
SalBow6G1848 Salvia bowleyana HOM05D004247 ORTHO05D004994 8.2e-51 204.1 168 63.7
MBI05_g34744_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 2.4e-50 202.6 165 66.1
HanXRQChr05g0146621 Helianthus annuus HOM05D004247 ORTHO05D004994 9.1e-50 200.7 170 65.9
Rhsim06G0011800 Rhododendron simsii HOM05D004247 ORTHO05D004994 9.1e-50 200.7 169 63.3
Aqoxy6G01937 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 1.5e-49 199.9 171 64.9
EL10Ac1g02063 Beta vulgaris HOM05D004247 ORTHO05D004994 5.9e-49 198.0 161 65.2
CDE02G3101 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 1.7e-48 196.4 164 62.8
ECA233G0125 Erigeron canadensis HOM05D004247 ORTHO05D004994 1.7e-48 196.4 161 64.0
Migut.C00904 Erythranthe guttata HOM05D004247 ORTHO05D004994 1.7e-48 196.4 169 63.3
Oeu051143.1 Olea europaea HOM05D004247 ORTHO05D004994 5.0e-48 194.9 169 63.9
TWI12G1003 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 8.5e-48 194.1 155 69.7
Oeu027609.1 Olea europaea HOM05D004247 ORTHO05D004994 1.4e-47 193.4 169 63.3
unitig_899.g15551 Utricularia gibba HOM05D004247 ORTHO05D004994 1.4e-47 193.4 170 61.8
ECA232G3771 Erigeron canadensis HOM05D004247 ORTHO05D004994 4.2e-47 191.8 168 61.3
CDE04G1887 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 5.5e-47 191.4 158 65.8
Solyc04g082010.1 Solanum lycopersicum HOM05D004247 ORTHO05D004994 3.6e-46 188.7 171 61.4
Sopen04g035660 Solanum pennellii HOM05D004247 ORTHO05D004994 3.6e-46 188.7 171 61.4
DCAR_013894 Daucus carota HOM05D004247 ORTHO05D004994 3.0e-45 185.7 169 61.5
PGSC0003DMG400041620 Solanum tuberosum HOM05D004247 ORTHO05D004994 1.1e-44 183.7 171 60.8
AUR62036731 Chenopodium quinoa HOM05D004247 ORTHO05D004994 2.8e-43 179.1 102 81.4
AUR62013862 Chenopodium quinoa HOM05D004247 ORTHO05D004994 1.4e-42 176.8 102 80.4
Zm00001eb268360 Zea mays HOM05D004247 ORTHO05D004994 5.3e-42 174.9 169 60.4
Zm00001eb379570 Zea mays HOM05D004247 ORTHO05D004994 1.2e-41 173.7 170 60.0
Os06g0101600 Oryza sativa ssp. japonica HOM05D004247 ORTHO05D004994 2.9e-40 169.1 169 59.8
Dinv39560 Davidia involucrata HOM05D004247 ORTHO05D004994 8.5e-40 167.5 99 76.8
Nn6g31900 Nelumbo nucifera HOM05D004247 ORTHO05D004994 1.9e-39 166.4 145 66.2
TPR.G8442 Trifolium pratense HOM05D004247 ORTHO05D004994 5.5e-39 164.9 100 75.0
SEGI_02730 Sequoiadendron giganteum HOM05D004247 ORTHO05D004994 2.3e-37 159.5 176 51.7
AagrBONN_evm.TU.Sc2ySwM_228.703 Anthoceros agrestis HOM05D004247 ORTHO05D004994 3.5e-33 145.6 174 47.7
Pp3c19_21160 Physcomitrium patens HOM05D004247 ORTHO05D004994 4.5e-33 145.2 174 47.7
HPP92_015000 Vanilla planifolia HOM05D004247 ORTHO05D004994 1.7e-32 143.3 217 43.3
Sc02g0008920 Simmondsia chinensis HOM05D004247 ORTHO05D004994 5.0e-32 141.7 147 56.5
Pp3c21_4230 Physcomitrium patens HOM05D004247 ORTHO05D004994 3.2e-31 139.0 174 47.1
Pp3c18_13090 Physcomitrium patens HOM05D004247 ORTHO05D004994 1.4e-29 133.7 170 44.1
PRCOL_00002380 Prasinoderma coloniale HOM05D004247 ORTHO05D004994 2.6e-28 129.4 137 53.3
SMO351G0102 Selaginella moellendorffii HOM05D004247 ORTHO05D004994 2.6e-28 129.4 174 40.8
Cre03.g182551 Chlamydomonas reinhardtii HOM05D004247 ORTHO05D004994 1.7e-27 126.7 153 50.3
Nitab4.5_0006806g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 2.8e-27 125.9 70 81.4
Nitab4.5_0001476g0060 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.8e-26 123.2 70 80.0
MCO15G475 Micromonas commoda HOM05D004247 ORTHO05D004994 3.1e-26 122.5 117 53.0
Mapoly0080s0027 Marchantia polymorpha HOM05D004247 ORTHO05D004994 2.5e-23 112.8 169 43.8
CBR_g18572 Chara braunii HOM05D004247 ORTHO05D004994 7.2e-23 111.3 174 44.3
Atru.chr13.210 Acer truncatum HOM05D004247 ORTHO05D004994 5.7e-20 101.7 180 43.3
Nitab4.5_0002353g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.7e-19 100.1 67 71.6
Nitab4.5_0000498g0120 Nicotiana tabacum HOM05D004247 ORTHO05D004994 4.5e-17 92.0 67 62.7
Cc01_g01320 Coffea canephora HOM05D004247 ORTHO05D004994 1.0e-13 80.9 44 79.5
Cc01_g01310 Coffea canephora HOM05D004247 ORTHO05D004994 1.6e-06 57.0 68 57.4


User provided reference genes

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