Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p13870 Brassica napus HOM05D010985 ORTHO05D014949 1.8e-68 262.7 153 100.0
BraA05t22753Z Brassica rapa HOM05D010985 ORTHO05D014949 1.4e-65 253.1 153 96.1
A05p39690 Brassica napus HOM05D000449 ORTHO05D000360 5.5e-54 214.5 118 94.9
BraA03t12563Z Brassica rapa HOM05D010985 ORTHO05D014949 1.2e-53 213.4 128 98.4
A08p13030 Brassica napus HOM05D010985 ORTHO05D014949 6.6e-31 137.9 118 73.7
BcaB01g04203 Brassica carinata HOM05D005376 ORTHO05D006481 1.8e-28 129.8 83 89.2
BcaC05g27435 Brassica carinata HOM05D010985 ORTHO05D006481 3.1e-28 129.0 115 66.1
BcaC01g06187 Brassica carinata HOM05D005376 ORTHO05D006481 2.6e-27 125.9 82 87.8
C05p33870 Brassica napus HOM05D010985 ORTHO05D014949 4.4e-27 125.2 129 64.3
C03p18310 Brassica napus HOM05D005376 ORTHO05D006481 7.5e-27 124.4 82 87.8
BolC3t14229H Brassica oleracea HOM05D005376 ORTHO05D006481 7.5e-27 124.4 82 87.8
BraA03t10859Z Brassica rapa HOM05D005376 ORTHO05D006481 3.7e-26 122.1 89 80.9
A03p15670 Brassica napus HOM05D005376 ORTHO05D006481 8.3e-26 120.9 93 78.5
BcaC04g21175 Brassica carinata HOM05D010985 ORTHO05D014949 7.0e-25 117.9 118 66.9
C09p34530 Brassica napus HOM05D010985 ORTHO05D014949 8.6e-23 110.9 117 64.1
BolC9t56297H Brassica oleracea HOM05D010985 ORTHO05D014949 8.6e-23 110.9 117 64.1
Sp6g14660 Schrenkiella parvula HOM05D005376 ORTHO05D006481 1.1e-20 104.0 70 85.7
A02p40780 Brassica napus HOM05D021362 ORTHO05D014960 4.0e-20 102.1 65 100.0
A10p31810 Brassica napus HOM05D010985 ORTHO05D006481 1.5e-19 100.1 60 90.0
Carub.0008s1254 Capsella rubella HOM05D005376 ORTHO05D006481 5.4e-17 91.7 84 67.9
BcaB01g04187 Brassica carinata HOM05D005376 ORTHO05D006481 6.0e-16 88.2 67 80.6
AT5G52440 Arabidopsis thaliana HOM05D005376 ORTHO05D006481 3.9e-15 85.5 83 65.1
Sp6g02380 Schrenkiella parvula HOM05D000147 ORTHO05D001254 3.9e-15 85.5 66 66.7
C08p34900 Brassica napus HOM05D010985 ORTHO05D014960 8.6e-15 84.3 66 68.2
BolC3t20672H Brassica oleracea HOM05D010985 ORTHO05D014960 8.6e-15 84.3 66 68.2
Thhalv10014513m.g Eutrema salsugineum HOM05D005376 ORTHO05D006481 1.1e-14 84.0 80 68.8
Thhalv10028366m.g Eutrema salsugineum HOM05D000147 ORTHO05D001254 1.1e-14 84.0 66 66.7
AL8G26870 Arabidopsis lyrata HOM05D005376 ORTHO05D006481 3.3e-14 82.4 107 55.1
BolC6t38537H Brassica oleracea HOM05D010985 ORTHO05D014960 3.3e-14 82.4 69 66.7
BcaC03g14530 Brassica carinata HOM05D005376 ORTHO05D006481 4.3e-14 82.0 96 59.4
BcaB02g10956 Brassica carinata HOM05D005376 ORTHO05D006481 6.2e-13 78.2 151 43.7
BcaC02g11070 Brassica carinata HOM05D010985 ORTHO05D014960 6.2e-13 78.2 66 63.6
C04p20830 Brassica napus HOM05D010985 ORTHO05D014960 6.2e-13 78.2 66 63.6
CARHR265430 Cardamine hirsuta HOM05D005376 ORTHO05D006481 8.1e-13 77.8 111 54.1
A09p01930 Brassica napus HOM05D000147 ORTHO05D001254 1.8e-12 76.6 64 67.2
C07p03450 Brassica napus HOM05D010985 ORTHO05D014960 1.8e-12 76.6 78 59.0
C09p02020 Brassica napus HOM05D000147 ORTHO05D001254 1.8e-12 76.6 64 67.2
BolC9t53132H Brassica oleracea HOM05D000147 ORTHO05D001254 1.8e-12 76.6 64 67.2
BraA09t35843Z Brassica rapa HOM05D000147 ORTHO05D001254 1.8e-12 76.6 64 67.2
BolC4t23613H Brassica oleracea HOM05D010985 ORTHO05D014960 2.3e-12 76.3 66 62.1
BcaC01g06754 Brassica carinata HOM05D000147 ORTHO05D001254 3.1e-12 75.9 66 80.3
C03p37830 Brassica napus HOM05D000147 ORTHO05D001254 3.1e-12 75.9 66 80.3
BolC3t16072H Brassica oleracea HOM05D000147 ORTHO05D001254 3.1e-12 75.9 66 80.3
BcaNung04057 Brassica carinata HOM05D000147 ORTHO05D001254 5.2e-12 75.1 64 65.6
CARHR250770 Cardamine hirsuta HOM05D000147 ORTHO05D001254 5.2e-12 75.1 67 62.7
BcaB01g02037 Brassica carinata HOM05D000147 ORTHO05D001254 1.2e-11 73.9 64 65.6
BcaB05g21960 Brassica carinata HOM05D005376 ORTHO05D006481 1.2e-11 73.9 93 54.8
BcaNung04060 Brassica carinata HOM05D000147 ORTHO05D001254 1.2e-11 73.9 64 65.6
A03p31040 Brassica napus HOM05D000147 ORTHO05D001254 1.2e-11 73.9 66 77.3
BraA03t12281Z Brassica rapa HOM05D000147 ORTHO05D001254 1.2e-11 73.9 66 77.3
AT4G02480 Arabidopsis thaliana HOM05D000147 ORTHO05D001254 1.5e-11 73.6 68 64.7
A02p11810 Brassica napus HOM05D005376 ORTHO05D006481 2.0e-11 73.2 98 56.1
Carub.0006s3466 Capsella rubella HOM05D000147 ORTHO05D001254 2.0e-11 73.2 67 59.7
BraA02t06246Z Brassica rapa HOM05D005376 ORTHO05D006481 2.6e-11 72.8 85 57.6
Aa31LG3G8830 Aethionema arabicum HOM05D005376 ORTHO05D006481 4.4e-11 72.0 102 53.9
Aa31LG5G2110 Aethionema arabicum HOM05D000147 ORTHO05D001254 5.8e-11 71.6 67 59.7
A03p15660 Brassica napus HOM05D027345 ORTHO05D028164 5.8e-11 71.6 70 65.7
AL6G50580 Arabidopsis lyrata HOM05D000147 ORTHO05D001254 1.3e-10 70.5 67 62.7
BolC2t08101H Brassica oleracea HOM05D005376 ORTHO05D006481 1.7e-10 70.1 99 55.6
A02p24760 Brassica napus HOM05D000147 ORTHO05D001254 2.9e-10 69.3 63 61.9
BraA02t07462Z Brassica rapa HOM05D000147 ORTHO05D001254 2.9e-10 69.3 63 61.9
C02p19650 Brassica napus HOM05D005376 ORTHO05D006481 7.1e-09 64.7 82 56.1
Sp1g01890 Schrenkiella parvula HOM05D000147 ORTHO05D001254 7.8e-08 61.2 66 51.5
BraA03t10858Z Brassica rapa HOM05D027345 ORTHO05D028164 1.0e-07 60.8 70 58.6
THA.LOC104825106 Tarenaya hassleriana HOM05D005376 ORTHO05D006481 1.0e-07 60.8 105 45.7
Thhalv10006579m.g Eutrema salsugineum HOM05D000147 ORTHO05D001254 1.3e-07 60.5 67 53.7
AL1G12330 Arabidopsis lyrata HOM05D000147 ORTHO05D001254 2.3e-07 59.7 70 54.3
AT1G02890 Arabidopsis thaliana HOM05D000147 ORTHO05D001254 3.9e-07 58.9 67 55.2
BcaB04g19764 Brassica carinata HOM05D000147 ORTHO05D014960 5.1e-07 58.5 38 78.9
BcaC03g16129 Brassica carinata HOM05D000147 ORTHO05D001254 5.1e-07 58.5 63 54.0
BraA10t44943Z Brassica rapa HOM05D021362 ORTHO05D014949 1.5e-06 57.0 36 83.3
Thecc.03G181600 Theobroma cacao HOM05D005376 ORTHO05D006481 1.5e-06 57.0 96 44.8
THA.LOC104801270 Tarenaya hassleriana HOM05D000147 ORTHO05D001254 4.3e-06 55.5 63 52.4
Ciclev10005655m.g Citrus clementina HOM05D005376 ORTHO05D006481 5.6e-06 55.1 80 46.2


User provided reference genes

Program Settings