Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p08480 Brassica napus HOM05D009371 ORTHO05D011485 0.0e+00 1091.3 564 100.0
BraA07t28633Z Brassica rapa HOM05D009371 ORTHO05D011485 2.0e-287 991.9 572 91.8
BolC7t41814H Brassica oleracea HOM05D009371 ORTHO05D011485 3.2e-272 941.4 573 88.5
C07p13220 Brassica napus HOM05D009371 ORTHO05D011485 7.8e-271 936.8 571 88.3
BcaC06g35588 Brassica carinata HOM05D009371 ORTHO05D011485 7.5e-173 611.3 370 87.8
BcaB06g26555 Brassica carinata HOM05D009371 ORTHO05D011485 5.1e-113 412.5 345 66.4
BcaC06g35589 Brassica carinata HOM05D009371 ORTHO05D011485 1.6e-90 337.8 215 86.0
A01p31190 Brassica napus HOM05D009371 ORTHO05D011485 2.0e-56 224.6 329 45.3
BraA01t03244Z Brassica rapa HOM05D009371 ORTHO05D011485 2.0e-56 224.6 329 45.3
Sp3g21960 Schrenkiella parvula HOM05D009371 ORTHO05D011485 2.2e-55 221.1 331 46.2
BcaB04g20415 Brassica carinata HOM05D009371 ORTHO05D011485 6.3e-55 219.5 302 48.3
BolC1t03928H Brassica oleracea HOM05D009371 ORTHO05D011485 1.6e-53 214.9 329 45.3
BcaB06g26556 Brassica carinata HOM05D009371 ORTHO05D011485 3.5e-53 213.8 148 80.4
C01p39740 Brassica napus HOM05D009371 ORTHO05D011485 3.5e-53 213.8 329 45.3
BolC1t03918H Brassica oleracea HOM05D009371 ORTHO05D011485 2.3e-52 211.1 316 45.3
BcaB04g20406 Brassica carinata HOM05D009371 ORTHO05D011485 9.5e-51 205.7 270 50.4
A01p31120 Brassica napus HOM05D009371 ORTHO05D011485 3.6e-50 203.8 318 43.7
BraA01t03236Z Brassica rapa HOM05D009371 ORTHO05D011485 3.6e-50 203.8 318 43.7
Thhalv10002921m.g Eutrema salsugineum HOM05D009371 ORTHO05D011485 3.6e-50 203.8 330 45.8
C01p39660 Brassica napus HOM05D009371 ORTHO05D011485 3.0e-49 200.7 313 44.4
AL3G38920 Arabidopsis lyrata HOM05D009371 ORTHO05D011485 2.9e-39 167.5 329 38.9
AT3G24260 Arabidopsis thaliana HOM05D009371 ORTHO05D011485 1.3e-31 142.1 324 34.0
Sp3g21640 Schrenkiella parvula HOM05D009371 ORTHO05D011485 2.4e-30 137.9 370 33.0
AL3G38910 Arabidopsis lyrata HOM05D009371 ORTHO05D011485 7.8e-29 132.9 320 33.4
AT3G28870 Arabidopsis thaliana HOM05D009371 ORTHO05D011485 4.1e-22 110.5 133 48.1
Carub.0003s2422 Capsella rubella HOM05D009371 ORTHO05D011485 1.1e-19 102.4 354 29.1
THA.LOC104808708 Tarenaya hassleriana HOM05D009371 ORTHO05D011485 3.1e-17 94.4 188 37.8
Aa31LG8G10500 Aethionema arabicum HOM05D009371 ORTHO05D011485 1.7e-12 78.6 118 37.3
Aa31LG8G10520 Aethionema arabicum HOM05D009371 ORTHO05D011485 7.3e-11 73.2 118 36.4
Sp3g21620 Schrenkiella parvula HOM05D009371 ORTHO05D011485 2.4e-09 68.2 214 30.4
A02p02840 Brassica napus HOM05D000629 ORTHO05D000576 3.2e-06 57.8 173 30.6
BraA02t05257Z Brassica rapa HOM05D000629 ORTHO05D000576 3.2e-06 57.8 173 30.6
COL.COLO4_37017 Corchorus olitorius HOM05D000629 ORTHO05D000576 3.2e-06 57.8 247 25.9
unitig_744.g24345 Utricularia gibba HOM05D000629 ORTHO05D000576 5.4e-06 57.0 172 27.9


User provided reference genes

Program Settings