Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 0.0e+00 1338.2 683 100.0
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 0.0e+00 1272.7 686 95.3
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 0.0e+00 1234.9 686 91.8
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 0.0e+00 1233.4 686 92.0
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 0.0e+00 1230.7 686 91.8
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 0.0e+00 1187.2 686 88.2
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 0.0e+00 1132.9 689 85.1
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 9.0e-306 1053.1 690 79.9
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 3.0e-301 1038.1 690 79.7
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 3.9e-293 1011.1 691 77.1
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 2.5e-287 991.9 691 75.5
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 5.7e-276 954.1 615 80.0
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 4.1e-242 841.6 732 62.8
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 2.0e-236 822.8 708 65.0
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 1.7e-195 686.8 729 53.5
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 1.3e-190 670.6 721 52.6
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 3.7e-190 669.1 735 52.0
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 6.9e-189 664.8 723 51.7
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 2.6e-188 662.9 736 51.0
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 2.9e-187 659.4 684 54.2
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 4.2e-186 655.6 670 53.7
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 1.2e-185 654.1 712 51.8
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 2.3e-184 649.8 727 50.1
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 3.3e-183 646.0 685 51.8
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 5.7e-183 645.2 727 51.2
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 1.3e-182 644.0 686 52.8
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 1.1e-181 641.0 689 50.7
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 3.9e-176 622.5 730 48.8
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 3.9e-176 622.5 727 50.3
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 3.9e-176 622.5 702 49.9
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 1.5e-175 620.5 715 49.8
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 1.9e-175 620.2 691 50.4
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 5.7e-175 618.6 734 48.9
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 6.3e-174 615.1 694 50.1
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 1.4e-173 614.0 694 49.9
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 1.4e-173 614.0 642 54.4
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 3.1e-173 612.8 660 50.3
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 6.9e-173 611.7 731 47.6
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 9.1e-173 611.3 669 50.1
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.2e-172 610.9 694 49.7
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.2e-172 610.9 694 49.7
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 1.2e-172 610.9 740 48.6
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 3.4e-172 609.4 694 50.0
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 5.9e-172 608.6 676 50.7
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 1.7e-171 607.1 731 47.2
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 6.5e-171 605.1 737 48.4
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 8.5e-171 604.7 670 49.4
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 1.1e-170 604.4 733 46.9
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 5.5e-170 602.1 663 51.4
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 6.1e-169 598.6 663 49.5
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 7.9e-169 598.2 744 46.8
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 1.0e-168 597.8 641 53.8
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.0e-168 597.8 720 46.9
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 3.0e-168 596.3 676 50.1
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 5.1e-168 595.5 740 47.7
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 6.7e-168 595.1 672 48.1
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 2.6e-167 593.2 717 46.6
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 3.3e-167 592.8 638 51.9
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 9.7e-167 591.3 657 49.3
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 1.1e-165 587.8 668 49.4
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 1.4e-165 587.4 622 50.8
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 7.7e-164 581.6 815 44.2
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 2.2e-163 580.1 730 46.4
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.6e-161 573.9 684 49.1
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 3.0e-160 569.7 642 51.2
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 8.8e-160 568.2 558 54.1
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 1.1e-159 567.8 688 46.4
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 3.3e-159 566.2 718 46.4
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 5.7e-159 565.5 646 48.5
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 2.2e-158 563.5 681 46.7
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 3.7e-158 562.8 666 49.1
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 6.3e-158 562.0 748 45.2
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 5.0e-155 552.4 692 46.5
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 1.2e-153 547.7 711 45.6
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 8.8e-152 541.6 669 46.0
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 9.7e-151 538.1 659 47.0
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 5.3e-149 532.3 496 58.5
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 2.7e-148 530.0 511 55.4
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 3.2e-146 523.1 672 44.0
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.1e-141 508.1 634 46.7
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 3.1e-141 506.5 670 43.1
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 5.7e-135 485.7 521 51.8
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 2.5e-122 443.7 366 60.1
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 1.6e-121 441.0 680 42.4
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 1.1e-120 438.3 692 41.8
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 6.8e-120 435.6 496 51.4
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 8.6e-115 418.7 332 63.9
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 6.2e-113 412.5 404 55.2
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 4.4e-111 406.4 609 43.3
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 9.9e-111 405.2 522 45.0
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 1.0e-107 395.2 482 46.3
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 8.6e-107 392.1 609 42.9
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 4.0e-104 383.3 346 57.8
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 1.8e-96 357.8 661 36.6
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 2.6e-95 354.0 328 55.2
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 4.6e-92 343.2 361 52.1
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 1.6e-89 334.7 659 33.7
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 1.2e-84 318.5 355 50.7
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 6.7e-83 312.8 381 49.1
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 1.4e-77 295.0 618 33.8
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 3.7e-73 280.4 572 33.6
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 1.6e-65 255.0 381 39.6
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 3.8e-62 243.8 377 41.1
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 2.4e-56 224.6 599 29.5
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 4.1e-56 223.8 573 29.5
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 4.8e-49 200.3 326 38.3
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 7.0e-48 196.4 298 44.6
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 2.9e-46 191.0 183 54.1
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 5.5e-45 186.8 195 50.3
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 3.3e-42 177.6 382 36.1
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 1.2e-39 169.1 135 58.5
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 4.2e-37 160.6 123 64.2
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 8.0e-36 156.4 184 42.9
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 1.2e-31 142.5 265 36.2
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 4.2e-29 134.0 332 34.9
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 9.4e-29 132.9 140 42.9
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.4e-27 129.0 258 34.5
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 5.2e-27 127.1 188 40.4
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 7.0e-24 116.7 126 48.4
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 2.5e-21 108.2 125 51.2
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 7.5e-18 96.7 77 62.3
SEGI_25817 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 1.4e-16 92.4 78 55.1
HanXRQChr00c0062g0571551 Helianthus annuus HOM05D006226 ORTHO05D007738 3.1e-11 74.7 91 45.1
Actinidia07412 Actinidia chinensis HOM05D006226 ORTHO05D007738 8.9e-11 73.2 56 60.7
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 2.6e-10 71.6 67 46.3
MCO09G126 Micromonas commoda HOM05D006226 ORTHO05D007738 3.0e-06 58.2 228 26.3


User provided reference genes

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